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2024-05-04 12:57:19
Summary for Yersinia enterocolitica subsp. enterocolitica 8081, 8081.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Yersinia enterocolitica subsp. enterocolitica 8081, 8081
Genomic elements1 chromosomes(s), 1 circular plasmid(s)
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Genome features5'UTR:
2 genes, length ø 82 bp, gc-content ø 0.397
 
'+'-strand:
1 genes, length ø 71 bp, gc-content ø 0.38
 
'-'-strand:
1 genes, length ø 94 bp, gc-content ø 0.414
 
CDS:
4051 genes, length ø 964 bp, gc-content ø 0.476
 
'+'-strand:
1990 genes, length ø 963 bp, gc-content ø 0.478
 
'-'-strand:
2061 genes, length ø 965 bp, gc-content ø 0.475
 
mRNA:
2 genes, length ø 1204 bp, gc-content ø 0.451
 
'+'-strand:
1 genes, length ø 1175 bp, gc-content ø 0.449
 
'-'-strand:
1 genes, length ø 1234 bp, gc-content ø 0.452
 
misc_RNA:
40 genes, length ø 158 bp, gc-content ø 0.485
 
'+'-strand:
19 genes, length ø 147 bp, gc-content ø 0.498
 
'-'-strand:
21 genes, length ø 167 bp, gc-content ø 0.474
 
misc_feature:
7096 genes, length ø 436 bp, gc-content ø 0.496
 
'+'-strand:
3701 genes, length ø 472 bp, gc-content ø 0.498
 
'-'-strand:
3395 genes, length ø 397 bp, gc-content ø 0.493
 
operon:
1 genes, length ø 40091 bp, gc-content ø 0.524
 
'+'-strand:
1 genes, length ø 40091 bp, gc-content ø 0.524
 
'-'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
pseudo:
219 genes, length ø 510 bp, gc-content ø 0.472
 
'+'-strand:
116 genes, length ø 570 bp, gc-content ø 0.478
 
'-'-strand:
103 genes, length ø 443 bp, gc-content ø 0.465
 
rRNA:
22 genes, length ø 1508 bp, gc-content ø 0.525
 
'+'-strand:
15 genes, length ø 1574 bp, gc-content ø 0.524
 
'-'-strand:
7 genes, length ø 1368 bp, gc-content ø 0.53
 
rep_origin:
1 genes, length ø 650 bp, gc-content ø 0.432
 
'+'-strand:
1 genes, length ø 650 bp, gc-content ø 0.432
 
'-'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
repeat_region:
72 genes, length ø 1129 bp, gc-content ø 0.493
 
'+'-strand:
34 genes, length ø 1156 bp, gc-content ø 0.489
 
'-'-strand:
38 genes, length ø 1105 bp, gc-content ø 0.496
 
repeat_unit:
90 genes, length ø 157 bp, gc-content ø 0.44
 
'+'-strand:
57 genes, length ø 208 bp, gc-content ø 0.443
 
'-'-strand:
33 genes, length ø 67 bp, gc-content ø 0.434
 
sig_peptide:
750 genes, length ø 83 bp, gc-content ø 0.458
 
'+'-strand:
376 genes, length ø 84 bp, gc-content ø 0.457
 
'-'-strand:
374 genes, length ø 82 bp, gc-content ø 0.459
 
stem_loop:
9 genes, length ø 32 bp, gc-content ø 0.437
 
'+'-strand:
3 genes, length ø 32 bp, gc-content ø 0.437
 
'-'-strand:
6 genes, length ø 32 bp, gc-content ø 0.437
 
tRNA:
81 genes, length ø 77 bp, gc-content ø 0.581
 
'+'-strand:
57 genes, length ø 78 bp, gc-content ø 0.582
 
'-'-strand:
24 genes, length ø 76 bp, gc-content ø 0.578
 
COG categories 
Amino acid transport and metabolism [E]386
Carbohydrate transport and metabolism [G]290
Cell cycle control, mitosis and meiosis [D]38
Cell motility [N]185
Cell wall/membrane biogenesis [M]184
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]169
Cytoskeleton [Z]0
Defense mechanisms [V]0
Energy production and conversion [C]206
Extracellular structures [W]0
Function unknown [S]229
General function prediction only [R]409
Inorganic ion transport and metabolism [P]259
Intracellular trafficking and secretion [U]3
Lipid transport and metabolism [I]74
NOT ANALYZED8522
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]88
Posttranslational modification, protein turnover, chaperones [O]122
RNA processing and modification [A]0
Replication, recombination and repair [L]191
Secondary metabolites biosynthesis, transport and catabolism [Q]107
Signal transduction mechanisms [T]141
Transcription [K]286
Translation, ribosomal structure and biogenesis [J]173
Unclassified [-]848