ENGENE - Ecoli Genome Browser - Summary for Escherichia coli APEC O1, APEC O1.

Summary for Escherichia coli APEC O1, APEC O1.

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chr: chromosome(s), pl: plasmid(s), seg: segment(s)

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	Escherichia coli APEC O1, APEC O1
Genomic elements	1 chromosomes(s) Show details
Genome features	CDS: 4457 genes, length ø 996 bp, gc-content ø 0.509 '+'-strand: 2126 genes, length ø 1004 bp, gc-content ø 0.509 '-'-strand: 2331 genes, length ø 989 bp, gc-content ø 0.509 rRNA: 22 genes, length ø 1466 bp, gc-content ø 0.567 '+'-strand: 15 genes, length ø 1530 bp, gc-content ø 0.565 '-'-strand: 7 genes, length ø 1328 bp, gc-content ø 0.571 tRNA: 94 genes, length ø 78 bp, gc-content ø 0.512 '+'-strand: 41 genes, length ø 80 bp, gc-content ø 0.509 '-'-strand: 53 genes, length ø 76 bp, gc-content ø 0.515
COG categories
Amino acid transport and metabolism [E]	407
Carbohydrate transport and metabolism [G]	354
Cell cycle control, mitosis and meiosis [D]	37
Cell motility [N]	126
Cell wall/membrane biogenesis [M]	204
Chromatin structure and dynamics [B]	0
Coenzyme transport and metabolism [H]	159
Cytoskeleton [Z]	0
Defense mechanisms [V]	16
Energy production and conversion [C]	265
Extracellular structures [W]	0
Function unknown [S]	259
General function prediction only [R]	461
Inorganic ion transport and metabolism [P]	266
Intracellular trafficking and secretion [U]	40
Lipid transport and metabolism [I]	84
NOT ANALYZED	243
Nuclear structure [Y]	0
Nucleotide transport and metabolism [F]	90
Posttranslational modification, protein turnover, chaperones [O]	116
RNA processing and modification [A]	1
Replication, recombination and repair [L]	185
Secondary metabolites biosynthesis, transport and catabolism [Q]	93
Signal transduction mechanisms [T]	162
Transcription [K]	280
Translation, ribosomal structure and biogenesis [J]	153
Unclassified [-]	1098