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2024-05-04 14:46:54
Summary for Buchnera aphidicola str. Cc (Cinara cedri), Cc.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Buchnera aphidicola str. Cc (Cinara cedri), Cc
Genomic elements1 chromosomes(s)
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Genome featuresCDS:
357 genes, length ø 992 bp, gc-content ø 0.214
 
'+'-strand:
194 genes, length ø 1032 bp, gc-content ø 0.205
 
'-'-strand:
163 genes, length ø 944 bp, gc-content ø 0.224
 
misc_RNA:
3 genes, length ø 256 bp, gc-content ø 0.328
 
'+'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
'-'-strand:
3 genes, length ø 256 bp, gc-content ø 0.328
 
pseudo:
6 genes, length ø 1178 bp, gc-content ø 0.136
 
'+'-strand:
4 genes, length ø 1055 bp, gc-content ø 0.151
 
'-'-strand:
2 genes, length ø 1425 bp, gc-content ø 0.107
 
rRNA:
3 genes, length ø 1496 bp, gc-content ø 0.456
 
'+'-strand:
1 genes, length ø 1463 bp, gc-content ø 0.486
 
'-'-strand:
2 genes, length ø 1513 bp, gc-content ø 0.44
 
tRNA:
31 genes, length ø 76 bp, gc-content ø 0.51
 
'+'-strand:
9 genes, length ø 77 bp, gc-content ø 0.528
 
'-'-strand:
22 genes, length ø 75 bp, gc-content ø 0.502
 
COG categories 
Amino acid transport and metabolism [E]43
Carbohydrate transport and metabolism [G]17
Cell cycle control, mitosis and meiosis [D]7
Cell motility [N]18
Cell wall/membrane biogenesis [M]3
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]8
Cytoskeleton [Z]0
Defense mechanisms [V]0
Energy production and conversion [C]25
Extracellular structures [W]0
Function unknown [S]9
General function prediction only [R]9
Inorganic ion transport and metabolism [P]5
Intracellular trafficking and secretion [U]0
Lipid transport and metabolism [I]7
NOT ANALYZED70
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]8
Posttranslational modification, protein turnover, chaperones [O]23
RNA processing and modification [A]0
Replication, recombination and repair [L]30
Secondary metabolites biosynthesis, transport and catabolism [Q]5
Signal transduction mechanisms [T]3
Transcription [K]15
Translation, ribosomal structure and biogenesis [J]106
Unclassified [-]11