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2024-05-04 13:45:16
Summary for Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN
Genomic elements1 chromosomes(s)
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Genome featuresCDS:
610 genes, length ø 995 bp, gc-content ø 0.319
 
'+'-strand:
350 genes, length ø 983 bp, gc-content ø 0.32
 
'-'-strand:
260 genes, length ø 1011 bp, gc-content ø 0.318
 
RBS:
480 genes, length ø 5 bp, gc-content ø 0.442
 
'+'-strand:
280 genes, length ø 5 bp, gc-content ø 0.441
 
'-'-strand:
200 genes, length ø 5 bp, gc-content ø 0.443
 
misc_RNA:
2 genes, length ø 406 bp, gc-content ø 0.386
 
'+'-strand:
2 genes, length ø 406 bp, gc-content ø 0.386
 
'-'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
misc_feature:
28 genes, length ø 3 bp, gc-content ø 0.221
 
'+'-strand:
12 genes, length ø 3 bp, gc-content ø 0.216
 
'-'-strand:
16 genes, length ø 3 bp, gc-content ø 0.225
 
pseudo:
4 genes, length ø 614 bp, gc-content ø 0.316
 
'+'-strand:
2 genes, length ø 126 bp, gc-content ø 0.407
 
'-'-strand:
2 genes, length ø 1102 bp, gc-content ø 0.225
 
rRNA:
3 genes, length ø 1560 bp, gc-content ø 0.488
 
'+'-strand:
1 genes, length ø 117 bp, gc-content ø 0.512
 
'-'-strand:
2 genes, length ø 2281 bp, gc-content ø 0.475
 
tRNA:
39 genes, length ø 77 bp, gc-content ø 0.527
 
'+'-strand:
21 genes, length ø 78 bp, gc-content ø 0.508
 
'-'-strand:
18 genes, length ø 75 bp, gc-content ø 0.549
 
COG categories 
Amino acid transport and metabolism [E]75
Carbohydrate transport and metabolism [G]34
Cell cycle control, mitosis and meiosis [D]13
Cell motility [N]0
Cell wall/membrane biogenesis [M]56
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]50
Cytoskeleton [Z]0
Defense mechanisms [V]3
Energy production and conversion [C]50
Extracellular structures [W]0
Function unknown [S]19
General function prediction only [R]41
Inorganic ion transport and metabolism [P]27
Intracellular trafficking and secretion [U]19
Lipid transport and metabolism [I]30
NOT ANALYZED556
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]24
Posttranslational modification, protein turnover, chaperones [O]37
RNA processing and modification [A]1
Replication, recombination and repair [L]31
Secondary metabolites biosynthesis, transport and catabolism [Q]3
Signal transduction mechanisms [T]4
Transcription [K]22
Translation, ribosomal structure and biogenesis [J]114
Unclassified [-]7