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2024-05-04 08:49:30
Summary for Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67
Genomic elements1 chromosomes(s)
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Genome featuresCDS:
4427 genes, length ø 900 bp, gc-content ø 0.519
 
'+'-strand:
2147 genes, length ø 904 bp, gc-content ø 0.518
 
'-'-strand:
2280 genes, length ø 897 bp, gc-content ø 0.521
 
misc_feature:
39 genes, length ø 488 bp, gc-content ø 0.491
 
'+'-strand:
15 genes, length ø 372 bp, gc-content ø 0.523
 
'-'-strand:
24 genes, length ø 561 bp, gc-content ø 0.47
 
pseudo:
158 genes, length ø 1410 bp, gc-content ø 0.515
 
'+'-strand:
87 genes, length ø 1419 bp, gc-content ø 0.514
 
'-'-strand:
71 genes, length ø 1399 bp, gc-content ø 0.516
 
rRNA:
22 genes, length ø 1462 bp, gc-content ø 0.574
 
'+'-strand:
15 genes, length ø 1527 bp, gc-content ø 0.572
 
'-'-strand:
7 genes, length ø 1322 bp, gc-content ø 0.577
 
repeat_region:
502 genes, length ø 319 bp, gc-content ø 0.556
 
'+'-strand:
502 genes, length ø 319 bp, gc-content ø 0.556
 
'-'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
tRNA:
85 genes, length ø 78 bp, gc-content ø 0.586
 
'+'-strand:
51 genes, length ø 77 bp, gc-content ø 0.582
 
'-'-strand:
34 genes, length ø 79 bp, gc-content ø 0.592
 
COG categories 
Amino acid transport and metabolism [E]434
Carbohydrate transport and metabolism [G]379
Cell cycle control, mitosis and meiosis [D]39
Cell motility [N]114
Cell wall/membrane biogenesis [M]230
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]170
Cytoskeleton [Z]0
Defense mechanisms [V]44
Energy production and conversion [C]289
Extracellular structures [W]3
Function unknown [S]350
General function prediction only [R]514
Inorganic ion transport and metabolism [P]264
Intracellular trafficking and secretion [U]131
Lipid transport and metabolism [I]96
NOT ANALYZED806
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]79
Posttranslational modification, protein turnover, chaperones [O]164
RNA processing and modification [A]2
Replication, recombination and repair [L]214
Secondary metabolites biosynthesis, transport and catabolism [Q]78
Signal transduction mechanisms [T]174
Transcription [K]333
Translation, ribosomal structure and biogenesis [J]181
Unclassified [-]816