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2024-05-04 12:09:19
Summary for Escherichia coli CFT073, CFT073.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Escherichia coli CFT073, CFT073
Genomic elements1 chromosomes(s)
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Genome featuresCDS:
5379 genes, length ø 881 bp, gc-content ø 0.501
 
'+'-strand:
2633 genes, length ø 874 bp, gc-content ø 0.501
 
'-'-strand:
2746 genes, length ø 889 bp, gc-content ø 0.501
 
misc_RNA:
6 genes, length ø 157 bp, gc-content ø 0.464
 
'+'-strand:
3 genes, length ø 143 bp, gc-content ø 0.465
 
'-'-strand:
3 genes, length ø 171 bp, gc-content ø 0.463
 
pseudo:
94 genes, length ø 669 bp, gc-content ø 0.518
 
'+'-strand:
50 genes, length ø 654 bp, gc-content ø 0.511
 
'-'-strand:
44 genes, length ø 686 bp, gc-content ø 0.525
 
rRNA:
21 genes, length ø 1523 bp, gc-content ø 0.57
 
'+'-strand:
15 genes, length ø 1523 bp, gc-content ø 0.57
 
'-'-strand:
6 genes, length ø 1522 bp, gc-content ø 0.57
 
repeat_region:
62 genes, length ø 1303 bp, gc-content ø 0.498
 
'+'-strand:
37 genes, length ø 1504 bp, gc-content ø 0.496
 
'-'-strand:
25 genes, length ø 1006 bp, gc-content ø 0.5
 
tRNA:
89 genes, length ø 78 bp, gc-content ø 0.589
 
'+'-strand:
53 genes, length ø 77 bp, gc-content ø 0.587
 
'-'-strand:
36 genes, length ø 80 bp, gc-content ø 0.593
 
COG categories 
Amino acid transport and metabolism [E]449
Carbohydrate transport and metabolism [G]443
Cell cycle control, mitosis and meiosis [D]47
Cell motility [N]116
Cell wall/membrane biogenesis [M]251
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]162
Cytoskeleton [Z]0
Defense mechanisms [V]57
Energy production and conversion [C]296
Extracellular structures [W]6
Function unknown [S]359
General function prediction only [R]562
Inorganic ion transport and metabolism [P]316
Intracellular trafficking and secretion [U]152
Lipid transport and metabolism [I]124
NOT ANALYZED272
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]93
Posttranslational modification, protein turnover, chaperones [O]153
RNA processing and modification [A]2
Replication, recombination and repair [L]315
Secondary metabolites biosynthesis, transport and catabolism [Q]108
Signal transduction mechanisms [T]192
Transcription [K]353
Translation, ribosomal structure and biogenesis [J]186
Unclassified [-]1350