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2024-05-18 08:50:32

Gene list

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COG category: Defense mechanisms
Organism: Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150

Number of genes found: 48

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Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPA4317 hypothetical proteinchromosome CDS4492546 876 + 0.518265
NA SPA4078 putative type-1 secretion proteinchromosome CDS4251116 2067 + 0.352201
NA SPA2550 putative type I secretion protein, ATP-binding proteinchromosome CDS2658327 2181 + 0.568088
NA SPA0391 hypothetical proteinchromosome CDS461600 1299 - 0.461894
acrB SPA2247 acriflavin resistance protein Bchromosome CDS2341063 3150 + 0.543492
acrD SPA0388 putative efflux pumpchromosome CDS454005 3114 - 0.552987
acrF SPA3258 RND family, multidrug transport protein, acriflavin resistance protein Fchromosome CDS3368795 3114 + 0.509313
ampD SPA0150 AmpD protein (anhydro-N-acetylmuramyl-tripeptide amidase)chromosome CDS172584 564 + 0.553191
ampE SPA0151 AmpE proteinchromosome CDS173144 855 + 0.552047
ampH SPA2348 penicillin-binding protein AmpHchromosome CDS2443028 1158 + 0.529361
creD SPA4400 inner membrane protein CreDchromosome CDS4574206 1350 + 0.53037
dinF SPA4055 putative DNA-damage-inducible membrane proteinchromosome CDS4214807 1326 + 0.570136
emrA SPA2672 multidrug resistance protein Achromosome CDS2777605 1173 + 0.546462
fhlA SPA2717 transcriptional activator of the formate hydrogenlyase systemchromosome CDS2819128 2079 + 0.548822
hsdM SPA4346 DNA methylase M, host modificationchromosome CDS4519391 1587 - 0.563957
hsdR SPA4347 subunit R of type I restriction-modification systemchromosome CDS4521135 3510 - 0.553846
hsdS SPA4345 subunit S of type I restriction-modification systemchromosome CDS4518006 1389 - 0.426206
iroC SPA2630 putative ABC transporter proteinchromosome CDS2733395 3657 + 0.590101
mdlA SPA2262 putative ABC transporter ATP-binding membrane proteinchromosome CDS2354569 1773 - 0.558376
mdlB SPA2261 putative ABC transporter ATP-binding membrane proteinchromosome CDS2352795 1782 - 0.576319
mrr SPA4348 mrr restriction system proteinchromosome CDS4524842 915 + 0.526776
msbA SPA1814 probable transport ATP-binding protein MsbAchromosome CDS1880307 1749 - 0.515723
res SPA2365 DNA restriction (DNA helicasechromosome CDS2464781 2970 - 0.490909
sapB SPA1191 peptide transport system permease protein SapBchromosome CDS1260483 966 - 0.52588
sapC SPA1182 peptide transport system permease protein SapCchromosome CDS1255182 891 - 0.575758
sapD SPA1181 peptide transport system ATP-binding protein SapDchromosome CDS1254190 993 - 0.524673
sapF SPA1180 peptide transport system ATP-binding protein SapFchromosome CDS1253382 807 - 0.532838
steD SPA2815 fimbrial subunitchromosome CDS2916601 501 + 0.56487
stkD SPA0182 putative fimbrial proteinchromosome CDS210264 573 - 0.464223
uppP SPA3073 undecaprenyl pyrophosphate phosphatasechromosome CDS3181026 822 - 0.53528
yadG SPA0175 hypothetical ABC transporter ATP-binding proteinchromosome CDS204458 927 + 0.495146
yadH SPA0176 ABC transporter integral membrane proteinchromosome CDS205381 771 + 0.546044
yajD SPA2312 hypothetical proteinchromosome CDS2406142 348 - 0.494253
ybhF SPA1936 hypothetical ABC transporter ATP-binding proteinchromosome CDS2017174 1737 + 0.563615
ybhR SPA1938 putative inner membrane proteinchromosome CDS2020149 1107 + 0.527552
ybhS SPA1937 putative inner membrane proteinchromosome CDS2018903 1131 + 0.543767
ybjR SPA1868 putative N-acetylmuramoyl-L-alanine amidasechromosome CDS1947153 831 - 0.569194
ybjZ SPA1857 conserved hypothetical ABC transporterchromosome CDS1931998 1947 - 0.542373
ycfV SPA1632 ABC transporter ATP-binding subunitchromosome CDS1694919 702 - 0.555556
ycgQ SPA1073 hypothetical proteinchromosome CDS1142425 915 - 0.563934
ydhE SPA1428 multidrug efflux protein NorAchromosome CDS1508963 1374 + 0.53639
ydhJ SPA1411 putative HlyD-family proteinchromosome CDS1492815 897 + 0.503902
yegN SPA0738 putative RND-family transporter proteinchromosome CDS820144 3123 - 0.582453
yegO SPA0737 putative RND-family transporter proteinchromosome CDS817063 3081 - 0.567673
yhcQ SPA3232 possible exported proteinchromosome CDS3338492 933 - 0.560557
yhhJ SPA3436 putative ABC superfamily (atp_bind/membrane) transport proteinchromosome CDS3542672 1125 - 0.550222
yhiH SPA3437 hypothetical ABC transporter ATP-binding proteinchromosome CDS3543796 2742 - 0.578045
yohC SPA0682 hypothetical proteinchromosome CDS764037 588 + 0.542517