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2024-05-18 10:05:12

Gene list

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COG category: Defense mechanisms
Organism: Yersinia pseudotuberculosis IP 32953, IP32953

Number of genes found: 56

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pseudotuberculosis IP 32953, IP32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB2747 hypothetical proteinchromosome CDS3248180 417 - 0.318945
NA YPTB1209 possible ABC transporter multidrug efflux pump, permease subunitchromosome CDS1441130 1107 - 0.479675
NA YPTB1943 putative ABC transporter, permease subunitchromosome CDS2286022 1182 + 0.490694
NA YPTB3879 possible type I restriction enzyme (restriction subunit)chromosome CDS4626797 3279 - 0.489478
NA YPTB0535 putative type I restriction enzyme, R subunitchromosome CDS628794 3249 - 0.445676
NA YPTB1210 possible ABC transporter multidrug efflux pump, permease subunitchromosome CDS1442249 1176 - 0.511054
NA YPTB0492 multidrug efflux protein, RND familychromosome CDS579319 3126 + 0.522073
NA YPTB0090 ABC transporter, multidrug efflux pump, fused permease and ATPase domainschromosome CDS102190 2115 - 0.438298
NA YPTB2169 putative ABC RTX toxin transporter, fused ATP binding/permease domainschromosome CDS2548767 2148 + 0.454376
NA YPTB1614 putative ABC efflux transporter, fused ATP-binding and permease domainschromosome CDS1963758 1719 - 0.468877
NA YPTB3306 RND family drug efflux pumpchromosome CDS3939458 3120 - 0.549038
NA YPTB1220 hypothetical proteinchromosome CDS1455355 342 - 0.423977
NA YPTB2305 multidrug efflux protein NorAchromosome CDS2719499 1374 + 0.511645
NA YPTB0537 putative type I restriction-modification system, methyltransferase subunit (N-6 DNA Methylase)chromosome CDS633337 2592 - 0.45679
NA YPTB3881 possible restriction modification enzymechromosome CDS4631115 1230 - 0.394309
NA YPTB3436 possible membrane bound HlyD family secretion protein.chromosome CDS4076258 1050 + 0.540952
NA YPTB3291 putative ABC iron siderophore transporter, fused permease and ATPase domainschromosome CDS3891269 1773 - 0.476593
NA YPTB2721 ABC transporter(efflux), fused permease and ATP-binding domainschromosome CDS3214876 2037 + 0.500245
NA YPTB0566 putative heavy metal/multi-drug efflux protein, RND familychromosome CDS666038 3087 + 0.510204
NA YPTB2395 probable N-acetylmuramoyl-L-alanine amidasechromosome CDS2826648 765 - 0.420915
NA YPTB3290 putative ABC iron siderophore transporter, fused permease and ATPase domains.chromosome CDS3889519 1758 - 0.435154
NA YPTB1391 putative ABC transporter with fused permease and ATP-binding domainschromosome CDS1656390 1950 + 0.514872
NA YPTB2765 HAE1 family (RND superfamily) multidrug efflux proteinchromosome CDS3265117 3132 + 0.513091
NA YPTB1944 ABC transporter, ATP-binding subunitchromosome CDS2287207 714 + 0.47479
NA YPTB1513 ABC transporter ATP-binding proteinchromosome CDS1817230 669 - 0.379671
NA YPTB0536 putative type I restriction enzyme, S subunitchromosome CDS632052 1284 - 0.378505
NA YPTB3883 hypothetical proteinchromosome CDS4633864 579 - 0.459413
NA YPTB1211 ABC transporter multidrug efflux pump, fused ATP-binding domainschromosome CDS1443429 1743 - 0.512909
NA YPTB1942 putative ABC transporter, permease subunitchromosome CDS2284740 1293 + 0.527456
NA YPTB2171 putative ABC RTX toxin transporter, fused ATP binding/permease domainschromosome CDS2552351 2139 + 0.509584
acrB YPTB0983 RND family, acridine/multidrug efflux pumpchromosome CDS1178852 3153 - 0.492547
ampD YPTB0709 N-acetyl-anhydromuramyl-L-alanine amidasechromosome CDS848301 552 + 0.487319
ampE YPTB0710 putative transmembrane protein, putative proteasechromosome CDS849125 855 + 0.481871
ampH YPTB1262 putative penicillin-binding proteinchromosome CDS1511022 1167 - 0.498715
creD YPTB3169 hypothetical proteinchromosome CDS3726585 1479 - 0.460446
emrA YPTB0856 multidrug efflux pump, membrane fusion (MFP/HlyD) family subunit emrAchromosome CDS1033513 1173 - 0.497016
hsdM YPTB3882 putative type I site-specific deoxyribonuclease LldI chain hs...chromosome CDS4632334 1524 - 0.456037
lolD YPTB2441 ABC transporter/lipoprotein releasing system, ATP-binding subunit lolDchromosome CDS2885388 705 - 0.496454
mdlA YPTB0971 ABC type drug efflux transporter, fused ATP binding and permease domainschromosome CDS1167219 1767 + 0.482739
mdlB YPTB0972 ABC type drug efflux transporter, fused ATP binding and permease domainschromosome CDS1168978 1824 + 0.500548
msbA YPTB1420 ABC phospholipid/LPS/lipidA transporter MsbA, fused permease and ATP-binding domainschromosome CDS1700720 1749 + 0.465981
sapB YPTB2273 ABC peptide transporter, permease subunit sapBchromosome CDS2683417 966 + 0.505176
sapC YPTB2274 ABC peptide transporter, permease subunit sapCchromosome CDS2684369 891 + 0.515152
sapD YPTB2275 ABC peptide transporter, ATP-binding subunit sapDchromosome CDS2685259 993 + 0.493454
sapF YPTB2276 ABC peptide transporter, ATP-binding subunit sapFchromosome CDS2686251 816 + 0.493873
uppP YPTB3412 undecaprenyl pyrophosphate phosphatasechromosome CDS4053876 819 - 0.483516
yadG YPTB0725 putative ABC type drug efflux protein, ATP bindingchromosome CDS870953 927 + 0.482201
yadH YPTB0726 putative ABC type drug efflux permease proteinchromosome CDS871876 771 + 0.485084
ybjR YPTB2366 probable N-acetylmuramoyl-L-alanine amidasechromosome CDS2788021 852 - 0.484742
ybtP YPTB1598 lipoprotein inner membrane ABC-transporterchromosome CDS1941953 1803 + 0.572934
ybtQ YPTB1599 inner membrane ABC-transporter YbtQchromosome CDS1943742 1803 + 0.586245
yeeO YPTB1580 putative MATE family multidrug efflux pumpchromosome CDS1907697 1431 + 0.508036
yegN YPTB2814 AcrB/AcrD/AcrF(HAE1)family (RND superfamily) drug efflux pumpchromosome CDS3324217 3159 + 0.535929
yegO YPTB2815 AcrB/AcrD/AcrF (HAE1) family (RND Superfamily) drug efflux pumpchromosome CDS3327372 3075 + 0.54374
yhcQ YPTB3547 putative HlyD family secretion proteinchromosome CDS4214299 936 - 0.530983
yijD YPTB0123 hypothetical proteinchromosome CDS145543 408 + 0.468137