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2024-05-18 13:18:45

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Shigella flexneri 5 str. 8401, 8401

Number of genes found: 46

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SFV_3930 putative adhesinchromosome CDS4033546 1149 - 0.492602
NA SFV_1686 possible enzymechromosome CDS1724004 1257 - 0.518695
NA SFV_3662 hypothetical proteinchromosome CDS3748314 312 - 0.448718
NA SFV_0951 putative fimbrial-like proteinchromosome CDS998110 543 + 0.471455
NA SFV_3661 hypothetical proteinchromosome CDS3747795 516 - 0.554264
ccmD SFV_2274 heme exporter protein Cchromosome CDS2311075 210 - 0.566667
clpP SFV_0411 ATP-dependent proteolytic subunit of clpA-clpP serine proteasechromosome CDS429428 624 + 0.509615
exbD SFV_3056 Biopolymer transport exbD proteinchromosome CDS3119967 426 - 0.5
fimA SFV_4213 major type 1 subunit fimbrin (pilin)chromosome CDS4352224 549 - 0.51184
fimF SFV_4208 fimbrial morphologychromosome CDS4346838 531 - 0.489642
fimG SFV_4207 fimbrial morphologychromosome CDS4346322 504 - 0.529762
flgM SFV_1093 Negative regulator of flagellin synthesischromosome CDS1135665 294 - 0.530612
flgN SFV_1092 flagellar biosynthetic proteinchromosome CDS1135244 417 - 0.479616
fliE SFV_1980 flagellar hook-basal body complex protein FliEchromosome CDS2021341 315 - 0.549206
fliH SFV_1983 flagellar protein FliHchromosome CDS2024508 687 + 0.572052
fliN SFV_1989 flagellar motor switch protein FliNchromosome CDS2029629 414 + 0.557971
fliP SFV_1991 flagellar biosynthetic protein FliPchromosome CDS2030410 738 + 0.53794
fliQ SFV_1992 flagellar biosynthetic protein FliQchromosome CDS2031157 270 + 0.511111
fliR SFV_1993 flagellar biosynthetic protein FliRchromosome CDS2031435 786 + 0.47201
fliS SFV_1969 flagellar protein FliSchromosome CDS2010121 411 + 0.484185
lepB SFV_2631 leader peptidasechromosome CDS2698030 975 - 0.52
lpfA SFV_3774 putative major fimbrial subunitchromosome CDS3865552 573 + 0.474695
ppdB SFV_2903 prepilin peptidase dependent protein Bchromosome CDS2970480 564 - 0.519504
ppdD SFV_0099 prelipin peptidase dependent proteinchromosome CDS115043 441 - 0.530612
prlA SFV_3320 putative ATPase subunit of translocasechromosome CDS3389033 1332 - 0.496997
secA SFV_0091 preprotein translocase subunit SecAchromosome CDS106567 2706 + 0.522912
secB SFV_3922 export protein SecBchromosome CDS4023300 468 + 0.510684
secE SFV_4053 preprotein translocasechromosome CDS4168295 384 + 0.552083
secF SFV_0374 protein secretion, membrane proteinchromosome CDS393102 972 + 0.516461
smf SFV_3305 hypothetical proteinchromosome CDS3377109 1125 - 0.510222
sppA SFV_1451 protease IV, a signal peptide peptidasechromosome CDS1495126 1857 - 0.519655
spy SFV_1477 periplasmic proteinchromosome CDS1522283 486 + 0.50823
tolC SFV_3080 outer membrane channel precursor proteinchromosome CDS3144993 1482 + 0.51417
tolR SFV_0598 TolR proteinchromosome CDS624053 429 - 0.517483
yajC SFV_0372 hypothetical proteinchromosome CDS390884 333 + 0.495495
ybeC SFV_0699 hypothetical proteinchromosome CDS735857 204 - 0.5
ybgD SFV_0616 putative fimbrial-like proteinchromosome CDS647357 567 + 0.47619
ybgP SFV_0618 putative chaperonechromosome CDS650448 732 + 0.495902
ychE SFV_1254 putative channel proteinchromosome CDS1308769 648 + 0.481481
ydeB SFV_1589 hypothetical proteinchromosome CDS1624052 666 - 0.510511
yehB SFV_2164 putative outer membrane proteinchromosome CDS2196259 2481 - 0.455462
yiiO SFV_3580 Uncharacterized periplasmic proteinchromosome CDS3660071 501 - 0.500998
yjaI SFV_4074 hypothetical proteinchromosome CDS4191428 567 - 0.516755
yjcP SFV_4131 putative enzymechromosome CDS4261162 1467 + 0.556919
yraK SFV_3175 putative fimbrial proteinchromosome CDS3247205 1092 + 0.478938
yrfC SFV_3399 hypothetical proteinchromosome CDS3452563 540 - 0.555556