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2024-05-18 14:43:48

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Escherichia coli UTI89, UTI89

Number of genes found: 44

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli UTI89, UTI89
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA UTI89_C1725 putative phage-related secreted proteinchromosome CDS1653886 1245 - 0.451406
NA UTI89_C0630 hypothetical proteinchromosome CDS641399 204 + 0.5
aufB UTI89_C3935 Auf fimbiral chaperone 1 precursorchromosome CDS3824245 780 - 0.382051
ccmD UTI89_C2476 heme exporter protein Cchromosome CDS2432257 210 - 0.566667
clpP UTI89_C0465 ATP-dependent proteolytic subunit of clpA-ClpP serine protease, heat shock protein F21.5chromosome CDS470795 624 + 0.501603
ecpD UTI89_C0154 periplasmic chaperone EcpD precursorchromosome CDS161498 741 - 0.442645
exbB UTI89_C3426 TonB-dependent enterochelin uptake proteinchromosome CDS3361843 735 - 0.526531
exbD UTI89_C3425 TonB-dependent enterochelin uptake proteinchromosome CDS3361411 426 - 0.483568
ffh UTI89_C2943 signal recognition particle proteinchromosome CDS2890522 1362 - 0.542584
fimC UTI89_C5013 periplasmic chaperone protein FimC precursorchromosome CDS4909052 726 + 0.444904
flgM UTI89_C1196 anti-FliA (anti-sigma) factor; also known as RflB proteinchromosome CDS1174803 294 - 0.517007
flhB UTI89_C2083 flagellar biosynthetic protein FlhBchromosome CDS1990945 1149 - 0.550914
fliE UTI89_C2137 flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junctionchromosome CDS2038797 345 - 0.53913
fliQ UTI89_C2149 flagellar biosynthetic protein FliQchromosome CDS2048713 270 + 0.507407
fliS UTI89_C2126 flagellar protein FliSchromosome CDS2029310 411 + 0.481752
fmlB UTI89_C1718 periplasmic chaperone FmlB proteinchromosome CDS1649274 711 - 0.452883
hofF UTI89_C3782 putative general secretion pathway protein Fchromosome CDS3677627 1197 + 0.506266
hofG UTI89_C3783 putative general secretion pathway protein G precursorchromosome CDS3678833 438 + 0.493151
lepB UTI89_C2890 signal peptidase Ichromosome CDS2846077 975 - 0.52
lspA UTI89_C0029 lipoprotein signal peptidasechromosome CDS26734 495 + 0.523232
marC UTI89_C1748 multiple antibiotic resistance protein MarCchromosome CDS1674957 666 - 0.504505
ppdA UTI89_C3227 prepilin peptidase dependent protein A precursorchromosome CDS3154143 471 - 0.541401
secD UTI89_C0430 protein-export membrane protein SecDchromosome CDS442030 1848 + 0.531385
secE UTI89_C3840 inner membrane preprotein translocasechromosome CDS3727538 384 - 0.549479
secF UTI89_C0431 protein-export membrane protein SecFchromosome CDS443843 1017 + 0.519174
secG UTI89_C3607 protein-export membrane protein SecGchromosome CDS3542003 381 - 0.501312
secY UTI89_C3746 putative ATPase subunit of translocasechromosome CDS3660576 1332 - 0.496246
smf UTI89_C3730 hypothetical proteinchromosome CDS3650237 1125 - 0.505778
sppA UTI89_C1962 protease IV, a signal peptide peptidasechromosome CDS1881084 1857 + 0.518578
tatB UTI89_C4424 sec-independent protein twin-arginine translocase subunit tatBchromosome CDS4308645 516 + 0.544574
tolB UTI89_C0736 periplasmic protein involved in the tonB-independent uptake of group A colicinschromosome CDS741465 1296 + 0.532407
tolQ UTI89_C0733 TolQ proteinchromosome CDS738896 693 + 0.503608
tolR UTI89_C0734 putative inner membrane protein TolRchromosome CDS739592 429 + 0.515152
yadK UTI89_C0150 putative fimbrial subunit YadK precursorchromosome CDS157049 597 - 0.433836
yadN UTI89_C0155 putative fimbrial subunit YadN precursorchromosome CDS162347 615 - 0.426016
yajC UTI89_C0429 hypothetical protein YajCchromosome CDS441640 363 + 0.46832
ychE UTI89_C1439 putative channel proteinchromosome CDS1373667 648 + 0.476852
yehC UTI89_C2384 putative periplasmic chaperone YehC precursorchromosome CDS2331684 675 - 0.38963
yheE UTI89_C3779 probable general secretion pathway protein Cchromosome CDS3673388 816 + 0.417892
yheF UTI89_C3780 probable general secretion pathway protein Dchromosome CDS3674175 1965 + 0.498219
yhgN UTI89_C3943 hypothetical protein YhgNchromosome CDS3837232 594 + 0.503367
yidC UTI89_C4258 60 KD inner-membrane proteinchromosome CDS4146644 1647 + 0.535519
yjjA UTI89_C5066 hypothetical protein YjjA precursorchromosome CDS4977463 498 - 0.491968
yqeC UTI89_C3261 hypothetical protein YqeCchromosome CDS3192953 771 - 0.490272