Gene list
Applied filters:
COG category: Intracellular trafficking and secretion
Organism: Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
Number of genes found: 122
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | t1629 | putative protease | chromosome | CDS | 1688560 | 1047 | - | 0.542502 |
NA | t2491 | puative autotransporter/virulence factor | chromosome | CDS | 2561488 | 2886 | - | 0.452529 |
NA | t1187 | hypothetical protein | chromosome | CDS | 1256434 | 486 | + | 0.493827 |
NA | t4163 | putative integral membrane protein | chromosome | CDS | 4308272 | 1389 | + | 0.365011 |
NA | t2644 | putative type I secretion protein | chromosome | CDS | 2729658 | 1410 | + | 0.569504 |
NA | t1659 | hypothetical protein | chromosome | CDS | 1717488 | 648 | - | 0.50463 |
NA | t2682 | hypothetical protein | chromosome | CDS | 2774334 | 432 | + | 0.578704 |
NA | t1442 | hypothetical protein | chromosome | CDS | 1486447 | 666 | + | 0.531532 |
NA | t2543 | probable secreted protein | chromosome | CDS | 2620356 | 408 | + | 0.465686 |
NA | t2360 | hypothetical protein | chromosome | CDS | 2426452 | 453 | + | 0.602649 |
NA | t4099 | hypothetical protein | chromosome | CDS | 4237346 | 1125 | + | 0.536 |
NA | t1896 | putative bacteriophage protein | chromosome | CDS | 1952716 | 261 | - | 0.421456 |
NA | t4162 | hypothetical protein | chromosome | CDS | 4307643 | 633 | + | 0.341232 |
NA | t4164 | putative type-I secretion protein | chromosome | CDS | 4309650 | 1308 | + | 0.365443 |
NA | t4260 | hypothetical protein | chromosome | CDS | 4426771 | 2091 | + | 0.470588 |
bcfA | t0022 | fimbrial subunit | chromosome | CDS | 24473 | 543 | + | 0.521179 |
bcfB | t0023 | fimbrial chaperone | chromosome | CDS | 25116 | 687 | + | 0.512373 |
bcfD | t0025 | fimbrial subunit | chromosome | CDS | 28429 | 1008 | + | 0.503968 |
bcfE | t0026 | fimbrial subunit | chromosome | CDS | 29437 | 546 | + | 0.47619 |
bcfF | t0027 | fimbrial subunit | chromosome | CDS | 29998 | 519 | + | 0.558767 |
bcfG | t0028 | fimbrial chaperone | chromosome | CDS | 30509 | 705 | + | 0.541844 |
ccmD | t3702 | heme exporter protein D2 | chromosome | CDS | 3817684 | 213 | + | 0.694836 |
ccmD | t0613 | heme exporter protein D1 | chromosome | CDS | 696159 | 213 | + | 0.694836 |
clpP | t2412 | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 2485120 | 624 | - | 0.511218 |
cpxP | t3559 | extracytoplasmic stress protein for protein-mediated toxicities | chromosome | CDS | 3659998 | 501 | - | 0.506986 |
exbB | t3079 | biopolymer transport ExbB protein | chromosome | CDS | 3161186 | 735 | - | 0.555102 |
exbD | t3078 | biopolymer transport ExbD protein | chromosome | CDS | 3160754 | 426 | - | 0.502347 |
ffh | t2632 | signal recognition particle protein | chromosome | CDS | 2708336 | 1362 | - | 0.549192 |
fimA | t2320 | Type-1 fimbrial protein, a chain precursor | chromosome | CDS | 2384470 | 555 | - | 0.54955 |
fimC | t2318 | fimbrial chaperone protein | chromosome | CDS | 2383126 | 693 | - | 0.494949 |
fimD | t2317 | outer membrane usher protein FimD precursor | chromosome | CDS | 2380483 | 2613 | - | 0.558362 |
fimF | t2315 | fimbria-like protein FimF precursor | chromosome | CDS | 2378933 | 519 | - | 0.543353 |
fimI | t2319 | hypothetical protein | chromosome | CDS | 2383862 | 534 | - | 0.544944 |
flgM | t1748 | negative regulator of flagellin synthesis | chromosome | CDS | 1813569 | 294 | + | 0.510204 |
flgN | t1749 | flagella synthesis protein FlgN | chromosome | CDS | 1813867 | 423 | + | 0.541371 |
flhA | t0964 | flagellar biosynthesis protein | chromosome | CDS | 1051231 | 2079 | + | 0.560847 |
flhB | t0963 | flagellar biosynthesis protein | chromosome | CDS | 1050087 | 1152 | + | 0.559028 |
fliE | t0909 | flagellar basal body protein | chromosome | CDS | 1006560 | 315 | + | 0.546032 |
fliF | t0908 | flagellar M-ring protein | chromosome | CDS | 1004661 | 1683 | - | 0.568627 |
fliH | t0906 | flagellar assembly protein | chromosome | CDS | 1002973 | 708 | - | 0.607345 |
fliI | t0905 | flagellum-specific ATP synthase | chromosome | CDS | 1001603 | 1371 | - | 0.598833 |
fliJ | t0904 | flagellar protein | chromosome | CDS | 1001138 | 444 | - | 0.513514 |
fliN | t0900 | flagellar motor switch protein | chromosome | CDS | 997921 | 414 | - | 0.545894 |
fliP | t0898 | flagellar biosynthesis protein | chromosome | CDS | 996807 | 738 | - | 0.536585 |
fliQ | t0897 | flagellar biosynthesis protein | chromosome | CDS | 996528 | 270 | - | 0.514815 |
fliR | t0896 | flagellar biosynthesis protein | chromosome | CDS | 995725 | 795 | - | 0.509434 |
fliS | t0916 | flagellar protein FliS | chromosome | CDS | 1011706 | 408 | - | 0.497549 |
ftsY | t3951 | cell division protein | chromosome | CDS | 4090423 | 1476 | + | 0.550813 |
hofB | t0149 | transport protein HofB | chromosome | CDS | 169457 | 1386 | - | 0.553391 |
hofC | t0148 | transport protein HofC | chromosome | CDS | 168265 | 1203 | - | 0.541978 |
hofQ | t4018 | type II secretion system protein | chromosome | CDS | 4170791 | 1239 | + | 0.567393 |
hopD | t4063 | Type III leader peptidase | chromosome | CDS | 4216773 | 468 | - | 0.523504 |
invA | t2798 | possible virulence-associated secretory protein | chromosome | CDS | 2876257 | 2058 | - | 0.455782 |
invG | t2800 | virulence-associated secretory protein | chromosome | CDS | 2879454 | 1689 | - | 0.463588 |
lepB | t0275 | signal peptidase I | chromosome | CDS | 314007 | 975 | + | 0.533333 |
lspA | t0049 | signal peptidase II | chromosome | CDS | 56686 | 501 | + | 0.516966 |
orgA | t2771 | oxygen-regulated invasion protein | chromosome | CDS | 2851668 | 672 | - | 0.449405 |
pilQ | t4245 | nucleotide-binding protein | chromosome | CDS | 4413760 | 1716 | + | 0.545455 |
pilR | t4246 | hypothetical protein | chromosome | CDS | 4415472 | 1086 | + | 0.563536 |
pilT | t3011 | Type II secretion, ATP-binding, protein | chromosome | CDS | 3101125 | 981 | - | 0.574924 |
pilU | t4249 | prepilin peptidase | chromosome | CDS | 4417675 | 663 | + | 0.536953 |
pilV | t4250 | prepilin | chromosome | CDS | 4418334 | 1308 | + | 0.502294 |
ppdD | t0150 | prepilin peptidase dependent protein D precursor | chromosome | CDS | 170852 | 438 | - | 0.534247 |
prgK | t2773 | pathogenicity 1 island effector protein | chromosome | CDS | 2852867 | 759 | - | 0.459816 |
prlA | t4085 | preprotein translocase SecY | chromosome | CDS | 4226792 | 1332 | + | 0.495495 |
safB | t2559 | periplasmic fimbrial chaperone protein | chromosome | CDS | 2637504 | 741 | - | 0.479082 |
safC | t2558 | outer-membrane fimbrial usher protein | chromosome | CDS | 2634970 | 2511 | - | 0.543608 |
sapB | t3828 | putative autotransporter | chromosome | CDS | 3949023 | 3351 | - | 0.523724 |
secA | t0140 | translocase | chromosome | CDS | 160098 | 2706 | + | 0.538064 |
secB | t3818 | export protein SecB | chromosome | CDS | 3938132 | 468 | + | 0.50641 |
secD | t2456 | protein export protein SecD | chromosome | CDS | 2524717 | 1848 | - | 0.547078 |
secE | t3480 | translocase | chromosome | CDS | 3574468 | 384 | - | 0.554688 |
secF | t2455 | protein export protein SecF | chromosome | CDS | 2523735 | 972 | - | 0.545267 |
secG | t3210 | protein-export membrane protein | chromosome | CDS | 3301870 | 333 | - | 0.510511 |
sefB | t4534 | fimbrial chaperone protein | chromosome | CDS | 4680464 | 753 | + | 0.288181 |
sefC | t4536 | outer membrane fimbrial usher protein | chromosome | CDS | 4681221 | 2553 | + | 0.359185 |
sipC | t2786 | pathogenicity island 1 effector protein | chromosome | CDS | 2865714 | 1230 | - | 0.474797 |
spaI | t2796 | type III secretion system ATPase | chromosome | CDS | 2874534 | 1296 | - | 0.54321 |
spaO | t2793 | type III secretion protein | chromosome | CDS | 2872192 | 912 | - | 0.526316 |
spaP | t2792 | virulence-associated secretory protein | chromosome | CDS | 2871528 | 675 | - | 0.414815 |
spaQ | t2791 | virulence-associated secretory protein | chromosome | CDS | 2871242 | 261 | - | 0.467433 |
spaR | t2790 | virulence-associated secretory protein | chromosome | CDS | 2870447 | 792 | - | 0.497475 |
spaS | t2789 | type III secretion protein | chromosome | CDS | 2869390 | 1071 | - | 0.431373 |
spiA | t1262 | putative outer membrane secretory protein | chromosome | CDS | 1334869 | 1494 | + | 0.423025 |
sppA | t1174 | protease IV | chromosome | CDS | 1240788 | 1857 | - | 0.558428 |
ssaJ | t1277 | putative pathogenicity island lipoprotein | chromosome | CDS | 1344683 | 750 | + | 0.425333 |
ssaN | t1283 | type III secretion system ATPase | chromosome | CDS | 1350097 | 1302 | + | 0.511521 |
ssaQ | t1286 | type III secretion protein | chromosome | CDS | 1352114 | 969 | + | 0.45614 |
ssaS | t1288 | putative type III secretion protein | chromosome | CDS | 1353794 | 267 | + | 0.41573 |
ssaT | t1289 | putative type III secretion protein | chromosome | CDS | 1354061 | 780 | + | 0.39359 |
ssaU | t1290 | putative type III secretion protein | chromosome | CDS | 1354837 | 1059 | + | 0.396601 |
ssaV | t1282 | putative type III secretion protein | chromosome | CDS | 1348062 | 2046 | + | 0.460411 |
staB | t0189 | chaperone protein EcpD precursor | chromosome | CDS | 215905 | 735 | - | 0.468027 |
staC | t0188 | outer membrane usher protein HtrE precursor | chromosome | CDS | 213239 | 2592 | - | 0.513117 |
stbA | t2521 | probable fimbrial protein | chromosome | CDS | 2596311 | 537 | + | 0.478585 |
stbB | t2522 | fimbrial chaperone protein | chromosome | CDS | 2596909 | 762 | + | 0.448819 |
stbE | t2525 | fimbrial chaperone protein | chromosome | CDS | 2601511 | 759 | + | 0.469038 |
stcB | t0705 | putative fimbrial chaperone protein | chromosome | CDS | 791314 | 684 | + | 0.397661 |
stdA | t2940 | probable fimbrial protein | chromosome | CDS | 3033973 | 582 | - | 0.524055 |
stdB | t2939 | probable outer membrane fimbrial usher protein | chromosome | CDS | 3031364 | 2490 | - | 0.610442 |
stdC | t2938 | probable fimbrial chaperone protein | chromosome | CDS | 3030580 | 744 | - | 0.583333 |
steB | t2857 | outer membrane usher protein | chromosome | CDS | 2935533 | 2700 | + | 0.553333 |
steC | t2858 | periplasmic fimbrial chaperone | chromosome | CDS | 2938245 | 774 | + | 0.546512 |
steF | t2861 | fimbrial subunit | chromosome | CDS | 2940026 | 537 | + | 0.482309 |
stgA | t3659 | probable fimbrial subunit protein | chromosome | CDS | 3766087 | 576 | + | 0.508681 |
stgB | t3660 | fimbrial chaperone protein | chromosome | CDS | 3766760 | 699 | + | 0.410587 |
sthA | t4634 | putative fimbrial protein | chromosome | CDS | 4787384 | 546 | - | 0.505495 |
sthB | t4633 | putative fimbrial chaperone protein | chromosome | CDS | 4786630 | 684 | - | 0.459064 |
sthD | t4631 | putative fimbrial subunit | chromosome | CDS | 4783473 | 558 | - | 0.496416 |
tatA | t3324 | twin argininte translocase protein A | chromosome | CDS | 3424403 | 255 | - | 0.454902 |
tatB | t3323 | sec-independent translocase | chromosome | CDS | 3423851 | 549 | - | 0.544627 |
tatC | t3322 | sec-independent protein translocase protein | chromosome | CDS | 3423069 | 780 | - | 0.508974 |
tatE | t2235 | twin argininte translocase protein A | chromosome | CDS | 2301533 | 204 | - | 0.485294 |
tolB | t2128 | translocation protein TolB precursor | chromosome | CDS | 2189139 | 1293 | - | 0.559938 |
tolC | t3107 | outer membrane channel precursor protein | chromosome | CDS | 3191564 | 1476 | + | 0.522358 |
tolQ | t2131 | tolQ protein | chromosome | CDS | 2192182 | 693 | - | 0.519481 |
tolR | t2130 | tolR protein | chromosome | CDS | 2191750 | 429 | - | 0.51049 |
yajC | t2457 | preprotein translocase subunit YajC | chromosome | CDS | 2526592 | 333 | - | 0.51952 |
yidC | t3678 | inner membrane protein translocase component YidC | chromosome | CDS | 3787571 | 1647 | - | 0.540984 |
yohG | t0683 | putative lipoprotein | chromosome | CDS | 768089 | 1437 | + | 0.580376 |
yrfC | t4016 | hypothetical protein | chromosome | CDS | 4169489 | 540 | + | 0.585185 |
yscR | t1287 | putative type III secretion protein | chromosome | CDS | 1353150 | 648 | + | 0.424383 |