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2024-05-18 10:33:54

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Yersinia pestis KIM, KIM

Number of genes found: 162

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA y3199 hypothetical proteinchromosome CDS3519037 669 - 0.312407
NA y3470 hypothetical proteinchromosome CDS3852162 273 + 0.450549
NA y3925 hypothetical proteinchromosome CDS4384144 942 + 0.514862
NA y2390 outer membrane usher proteinchromosome CDS2640440 2592 + 0.494985
NA y2025 channel proteinchromosome CDS2232322 645 + 0.452713
NA y1834 hypothetical proteinchromosome CDS2018786 3138 + 0.543658
NA y0352 fimbrial protein (precursor)chromosome CDS392608 531 - 0.436911
NA y1859 pilus assembly chaperonechromosome CDS2051247 753 - 0.446215
NA y1872 fimbrial componenetchromosome CDS2067827 1170 + 0.460684
NA y0562 hypothetical proteinchromosome CDS628795 2379 + 0.461959
NA y2389 pilin chaperonechromosome CDS2639747 645 + 0.424806
NA y3326 protein transportchromosome CDS3659626 1131 - 0.476569
NA y3429 virG proteinchromosome CDS3808157 3771 + 0.531159
NA y3580 hemolysin activator proteinchromosome CDS3971265 1689 - 0.541741
NA y1344 hypothetical proteinchromosome CDS1488476 300 - 0.52
NA y3465 hypothetical proteinchromosome CDS3848140 381 - 0.514436
NA y1871 usher proteinchromosome CDS2065224 2613 + 0.493685
NA y2392 pilin chaperonechromosome CDS2644393 741 + 0.442645
NA y1454 hypothetical proteinchromosome CDS1611263 2280 - 0.442544
NA y3879 hypothetical proteinchromosome CDS4319911 585 - 0.466667
NA y3488 hypothetical proteinchromosome CDS3871261 813 + 0.328413
NA y1846 hypothetical proteinchromosome CDS2034735 2211 + 0.581637
NA y1697 hemagglutinin-like secreted proteinchromosome CDS1874239 7740 + 0.572481
NA y0514 secretinchromosome CDS585508 1572 + 0.43257
NA y1544 fimbrial proteinchromosome CDS1711336 609 + 0.425287
NA y1095 hypothetical proteinchromosome CDS1235010 450 - 0.502222
NA y2268 hemolysin activator proteinchromosome CDS2501386 1635 - 0.372477
NA y3479 chaperonechromosome CDS3861595 720 - 0.488889
NA y0452 hypothetical proteinchromosome CDS504725 267 + 0.438202
NA y0453 hypothetical proteinchromosome CDS504995 663 + 0.505279
NA y4063 fimbrial-like proteinchromosome CDS4508097 645 - 0.427907
NA y0066 solute-binding periplasmic protein of ABC transpoterchromosome CDS76410 489 - 0.466258
NA y3490 hypothetical proteinchromosome CDS3872887 771 + 0.35668
NA Y1051 hypothetical proteinpMT-1 CDS42469 2937 + 0.49983
NA y3485 hypothetical proteinchromosome CDS3868029 450 + 0.433333
NA y3468 hypothetical proteinchromosome CDS3850980 414 + 0.444444
NA y4062 hypothetical proteinchromosome CDS4506192 1830 - 0.448087
NA y3484 hypothetical proteinchromosome CDS3867160 855 + 0.357895
NA y0942 membrane protein, N-terminal part of adhesin system componentchromosome CDS1057960 1161 + 0.507321
NA y3824 hemolysin activator protein precursorchromosome CDS4253228 1788 + 0.457494
NA y0454 hypothetical proteinchromosome CDS505660 777 + 0.449163
NA y3198 hypothetical proteinchromosome CDS3518072 957 - 0.314525
NA y0532 type III secretion system componentchromosome CDS598437 795 + 0.515723
NA y3884 hypothetical proteinchromosome CDS4325060 9042 + 0.511944
NA y1704 hypothetical proteinchromosome CDS1886965 393 + 0.450382
NA y3486 hypothetical proteinchromosome CDS3868671 1233 + 0.334955
NA y4117 inner membrane protein translocase component YidCchromosome CDS4567959 1641 + 0.481414
NA y3203 general secretion proteinchromosome CDS3522200 1512 - 0.39418
NA y0704 outer membrane protein, efflux pumpchromosome CDS790524 1407 + 0.510306
NA y3482 hypothetical proteinchromosome CDS3865823 423 + 0.385343
NA y2786 outer membrane proteinchromosome CDS3081476 1095 - 0.405479
NA Y1099 F1 capsulepMT-1 CDS79152 2502 + 0.396083
NA y3204 general secretion proteinchromosome CDS3523708 1923 - 0.333333
NA y0563 hypothetical proteinchromosome CDS631245 744 + 0.435484
NA y4061 outer membrane usher proteinchromosome CDS4505531 636 - 0.490566
NA y3195 type IV prepilin peptidasechromosome CDS3515572 915 - 0.357377
NA y4060 chaperonechromosome CDS4504671 828 - 0.426329
NA y3462 flagellar assembly proteinchromosome CDS3844754 744 - 0.537634
NA y1873 pilin chaperonechromosome CDS2068993 804 + 0.482587
NA y3573 hypothetical proteinchromosome CDS3956529 2286 + 0.547244
NA y3428 adhesinchromosome CDS3805501 2001 + 0.588206
NA y3489 hypothetical proteinchromosome CDS3872070 834 + 0.302158
NA y0530 type III secretion system componentchromosome CDS597435 711 + 0.451477
NA y0531 type III secretion system componentchromosome CDS598154 282 + 0.482269
NA y1351 fimbrial biogenesis proteinchromosome CDS1502195 750 + 0.492
NA y3823 hypothetical proteinchromosome CDS4251752 1392 + 0.383621
NA y3200 hypothetical proteinchromosome CDS3520008 591 - 0.338409
NA y0351 chaperonechromosome CDS391813 756 - 0.42328
NA y3427 hypothetical proteinchromosome CDS3803738 1659 + 0.46956
NA y1858 hypothetical proteinchromosome CDS2048629 2448 - 0.461193
NA y3288 hypothetical proteinchromosome CDS3617319 1926 - 0.543095
NA y3579 filamentous hemagglutininchromosome CDS3961333 9888 - 0.57231
NA y3169 hypothetical proteinchromosome CDS3488093 609 - 0.486043
NA y0407 hypothetical proteinchromosome CDS456209 528 - 0.477273
NA y1847 hypothetical proteinchromosome CDS2036932 435 + 0.547126
NA y1701 hemagglutinin-like secreted proteinchromosome CDS1883637 2046 + 0.517595
NA y1869 fimbrial proteinchromosome CDS2063668 543 + 0.425414
NA y1539 fimbrial proteinchromosome CDS1705756 555 + 0.443243
NA y2785 hypothetical proteinchromosome CDS3079608 1869 - 0.387373
NA y0567 hypothetical proteinchromosome CDS638175 3804 - 0.532334
NA y3197 L-like GSP proteinchromosome CDS3516898 1191 - 0.319899
NA y3493 hypothetical proteinchromosome CDS3874708 1557 + 0.353886
NA y0525 type III secretion system componentchromosome CDS592273 2055 + 0.519221
NA y0533 type III secretion system componentchromosome CDS599218 1071 + 0.489262
NA y3478 adhesinchromosome CDS3860464 1107 - 0.487805
NA y0941 membrane protein, C-terminal part of adhesin system componentchromosome CDS1056129 1791 + 0.455053
NA y3578 hypothetical proteinchromosome CDS3960892 150 - 0.513333
NA y3170 hypothetical proteinchromosome CDS3488692 570 - 0.461404
NA y0943 hypothetical proteinchromosome CDS1059114 4581 + 0.445536
NA y2388 fimbrial precursorchromosome CDS2639085 570 + 0.473684
NA y3575 hypothetical proteinchromosome CDS3959310 621 - 0.599034
NA y2267 hemolysinchromosome CDS2496626 4731 - 0.412598
NA y1899 hypothetical proteinchromosome CDS2096512 714 - 0.436975
NA y0529 type III secretion proteinchromosome CDS596406 963 + 0.54621
NA y1696 hemolysin activator proteinchromosome CDS1872539 1689 + 0.53878
caf1M Y1098 F1 capsulepMT-1 CDS78351 777 + 0.405405
ccmD y1570 heme exporter protein Dchromosome CDS1737124 303 + 0.518152
clpP y1027 ATP-dependent Clp protease proteolytic subunitchromosome CDS1156547 624 + 0.461538
cyaE y3560 hypothetical proteinchromosome CDS3940611 1527 + 0.521938
ecpD y1870 pilin chaperonechromosome CDS2064363 780 + 0.441026
ecpD y1541 pilin chaperonechromosome CDS1706449 780 + 0.411538
exbB y3495 TonB complex proteinchromosome CDS3876796 1062 - 0.520716
exbD y3494 TonB-complex proteinchromosome CDS3876361 432 - 0.483796
ffh y0892 GTP-binding export factorchromosome CDS1002978 1362 + 0.483847
fimD y0350 outer membrane usher protein FIMD precursorchromosome CDS389158 2628 - 0.471081
flgM y2513 anti-FliA factorchromosome CDS2773415 303 + 0.475248
flgN y2514 flagellar biosynthesis proteinchromosome CDS2773733 444 + 0.488739
flhA y2518 flagellar biosynthesis proteinchromosome CDS2779066 2079 - 0.518037
flhB y2519 flagellar biosynthesis proteinchromosome CDS2781144 1161 - 0.525409
flhB y3472 flagellar biosynthesis proteinchromosome CDS3853214 1134 + 0.446208
fliE y2475 flagellar basal body proteinchromosome CDS2739174 318 - 0.493711
fliF y3464 flagellar M-ring proteinchromosome CDS3846490 1641 - 0.502133
fliF y2476 flagellar M-ring proteinchromosome CDS2739838 1713 + 0.532983
fliH y2478 flagellar assembly proteinchromosome CDS2742511 738 + 0.550135
fliI y3461 flagellum-specific ATP synthasechromosome CDS3843421 1341 - 0.580164
fliI y2479 flagellum-specific ATP synthasechromosome CDS2743187 1479 + 0.54902
fliI y0526 flagellum-specific ATP synthasechromosome CDS594314 1338 + 0.575486
fliJ y2480 flagellar proteinchromosome CDS2744765 447 + 0.478747
fliN y2484 flagellar motor switch proteinchromosome CDS2748301 417 + 0.494005
fliP y3469 flagellar biosynthesis proteinchromosome CDS3851390 771 + 0.514916
fliP y2486 flagellar biosynthesis proteinchromosome CDS2749250 825 + 0.513939
fliQ y2487 flagellar biosynthesis proteinchromosome CDS2750180 270 + 0.522222
fliR y2488 flagellar biosynthesis proteinchromosome CDS2750452 783 + 0.496807
fliR y3471 flagellar biosynthetic proteinchromosome CDS3852435 780 + 0.475641
fliS y2467 flagellar protein FliSchromosome CDS2731874 399 + 0.466165
ftsY y0416 cell division membrane proteinchromosome CDS464212 1662 + 0.480144
hofB y0760 integral membrane proteinchromosome CDS847025 1557 - 0.460501
hofC y0759 integral membrane proteinchromosome CDS845829 1200 - 0.455
hofF y3202 general protein secretion proteinchromosome CDS3521012 1047 - 0.344795
hofG y3201 general protein secretion proteinchromosome CDS3520555 438 - 0.394977
hofQ y3932 transport porteinchromosome CDS4387085 1125 + 0.481778
hylA y0021 hemolysin precursorchromosome CDS29211 4965 - 0.444914
lepB y1296 leader peptidase (signal peptidase I)chromosome CDS1440151 999 + 0.49049
lspA y3699 signal peptidase IIchromosome CDS4110543 510 - 0.454902
ogl y1875 oligogalacturonide lyasechromosome CDS2071544 1167 + 0.459297
papC y3480 outer membrane usher proteinchromosome CDS3862332 2481 - 0.503023
papD y0348 pilus chaperonechromosome CDS386990 819 - 0.482295
ppdD y0761 prelipin peptidase dependent proteinchromosome CDS848556 465 - 0.447312
prlA y4010 preprotein translocase SecYchromosome CDS4451951 1332 + 0.459459
psaB y2881 pH 6 Antigen chaperone proteinchromosome CDS3183531 822 - 0.377129
psaC y2880 outer membrane usher proteinchromosome CDS3180976 2514 - 0.492045
secA y3617 translocasechromosome CDS4008449 2715 - 0.48582
secB y0074 export protein SecBchromosome CDS83162 477 - 0.484277
secD y0993 protein export protein SecDchromosome CDS1123631 1848 + 0.487554
secE y0478 translocasechromosome CDS536162 399 + 0.486216
secF y0994 protein export protein SecFchromosome CDS1125423 1035 + 0.476328
secG y0685 protein-export membrane proteinchromosome CDS769089 336 + 0.482143
smf1 y4024 hypothetical proteinchromosome CDS4462694 1122 + 0.486631
smfA y1593 fimbrial A protein precursorchromosome CDS1761515 531 + 0.463277
sohB y2057 proteasechromosome CDS2265449 1047 + 0.483286
sppA y2160 protease IV, a signal peptide peptidasechromosome CDS2387165 1851 + 0.480281
tadA y3487 secretion NTP hydrolasechromosome CDS3869915 1287 + 0.425796
tatE y1170 twin argininte translocase protein Achromosome CDS1314768 258 + 0.46124
tolB y3055 translocation protein TolB precursorchromosome CDS3363345 1293 - 0.4942
tolC y3516 outer membrane channel precursor proteinchromosome CDS3898569 1404 + 0.47151
tolQ y3058 inner membrane proteinchromosome CDS3366476 687 - 0.487627
tolR y3057 inner membrane proteinchromosome CDS3366035 429 - 0.468531
yajC y0992 preprotein translocase subunit YajCchromosome CDS1123202 402 + 0.427861
yapC y1134 autotransporterchromosome CDS1274178 1917 - 0.47157
yapE y3845 autotransporter proteinchromosome CDS4280307 3255 + 0.488786
yapH y3396 autotransporter adhesinchromosome CDS3747888 11133 + 0.528878
yfaL y3591 ATP-binding transport componentchromosome CDS3984991 2985 + 0.448241