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2024-05-18 12:19:17

Gene list

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COG category: Signal transduction mechanisms
Organism: Escherichia coli UTI89, UTI89

Number of genes found: 169

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli UTI89, UTI89
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA UTI89_C2677 repressor proteinchromosome CDS2629985 651 + 0.470046
NA UTI89_C2011 hypothetical proteinchromosome CDS1925086 1629 + 0.502149
NA UTI89_C1703 hypothetical proteinchromosome CDS1626581 219 - 0.452055
NA UTI89_C1116 hypothetical proteinchromosome CDS1106260 741 + 0.470985
NA UTI89_C1272 putative C4-type zinc finger proteinchromosome CDS1243524 222 - 0.490991
NA UTI89_C2444 fructose-specific PTS system IIA componentchromosome CDS2402414 1131 - 0.559682
NA UTI89_C2997 hypothetical proteinchromosome CDS2931364 327 - 0.550459
NA UTI89_C2157 hypothetical proteinchromosome CDS2052421 1710 - 0.519883
NA UTI89_C1702 hypothetical proteinchromosome CDS1624157 2424 - 0.500413
NA UTI89_C0246 hypothetical proteinchromosome CDS256437 1293 - 0.593194
NA UTI89_C4207 putative phosphotransferase system (PTS), fructose-specificchromosome CDS4095500 471 - 0.43949
NA UTI89_C4932 hypothetical proteinchromosome CDS4832303 1473 + 0.469111
NA UTI89_C4931 putative response regulatorchromosome CDS4831580 723 + 0.466113
NA UTI89_C4937 hypothetical proteinchromosome CDS4837681 2961 - 0.331645
NA UTI89_C4639 putative transport sensor proteinchromosome CDS4536090 1821 - 0.40637
NA UTI89_C4000 putative phosphotransferase system enzyme subunitchromosome CDS3886448 474 + 0.489451
NA UTI89_C0806 hypothetical protein YbiIchromosome CDS800833 267 - 0.509363
NA UTI89_C2624 phosphohistidine phosphatase SixAchromosome CDS2588863 486 - 0.520576
NA UTI89_C2033 hypothetical proteinchromosome CDS1942321 552 - 0.478261
NA UTI89_C4638 putative c4-dicarboxylate transport transcriptional regulatory proteinchromosome CDS4534739 1359 - 0.443709
NA UTI89_C5103 hypothetical proteinchromosome CDS4999989 327 + 0.550459
NA UTI89_C0336 hypothetical proteinchromosome CDS348768 705 - 0.485106
NA UTI89_C4973 hypothetical proteinchromosome CDS4877615 819 - 0.466422
aceK UTI89_C4575 bifunctional isocitrate dehydrogenase kinase/isocitrate dehydrogenase phosphatasechromosome CDS4466688 1725 + 0.527536
ampE UTI89_C0119 AmpEchromosome CDS121605 855 + 0.51462
apaH UTI89_C0056 bis(5'-nucleosyl)-tetraphosphatase, symmetricalchromosome CDS53572 849 - 0.553592
arcA UTI89_C5174 ArcA transcriptional dual regulatorchromosome CDS5063679 717 - 0.509066
arcB UTI89_C3646 aerobic respiration control sensor protein ArcBchromosome CDS3570367 2337 - 0.506632
artI UTI89_C0866 arginine-binding periplasmic protein 1 precursorchromosome CDS863216 732 - 0.487705
atoC UTI89_C2502 acetoacetate metabolism regulatory protein AtoCchromosome CDS2458169 1386 + 0.492063
atoS UTI89_C2501 sensor protein AtoSchromosome CDS2456334 1839 + 0.488309
baeR UTI89_C2354 transcriptional response regulatory protein BaeRchromosome CDS2301656 723 + 0.540802
baeS UTI89_C2353 sensor protein BaeSchromosome CDS2300256 1404 + 0.530627
barA UTI89_C3156 sensor-regulator, activates OmpR by phophorylationchromosome CDS3069514 2757 + 0.496554
basR UTI89_C4707 transcriptional regulatory protein basR/PmrAchromosome CDS4607024 669 - 0.538117
basS UTI89_C4706 sensor kinase-phosphotransferase basS/PmrBchromosome CDS4605923 1101 - 0.537693
bolA UTI89_C0460 BolA transcriptional regulatorchromosome CDS468557 351 + 0.481481
cadC UTI89_C4730 transcriptional activator CadCchromosome CDS4632508 1539 - 0.422352
cdaR UTI89_C0178 carbohydrate diacid regulatorchromosome CDS188307 1131 + 0.531388
cheB UTI89_C2087 protein-glutamate methylesterasechromosome CDS1993361 1050 - 0.535238
cheR UTI89_C2088 chemotaxis protein methyltransferasechromosome CDS1994413 861 - 0.54007
cheW UTI89_C2090 CheW positive regulator of CheA protein activitychromosome CDS1997370 504 - 0.521825
cheY UTI89_C2086 chemotaxis protein CheYchromosome CDS1992957 390 - 0.489744
cheZ UTI89_C2085 chemotaxis protein CheZchromosome CDS1992302 675 - 0.536296
chpA UTI89_C3151 probable growth inhibitor, PemK-like, autoregulatedchromosome CDS3065213 336 - 0.479167
chpR UTI89_C3153 suppressor of inhibitory function of ChpA, PemI-like, autoregulatedchromosome CDS3065548 249 - 0.48996
cmtB UTI89_C3321 PTS system, mannitol-specific enzyme II component, crypticchromosome CDS3254462 444 - 0.423423
cpxA UTI89_C4495 sensor kinase-phosphotransferase CpxAchromosome CDS4380564 1374 - 0.547307
cpxR UTI89_C4496 transcriptional regulatory protein CpxRchromosome CDS4381934 699 - 0.51073
creB UTI89_C5171 transcriptional regulatory protein CreBchromosome CDS5060096 690 + 0.544928
creC UTI89_C5172 sensor protein CreCchromosome CDS5060785 1425 + 0.538246
crp UTI89_C3860 CRP-cAMP transcriptional dual regulatorchromosome CDS3744125 633 + 0.49763
csrA UTI89_C3057 carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface propertieschromosome CDS2977353 186 - 0.494624
cstA UTI89_C0600 carbon starvation protein Achromosome CDS613815 2106 + 0.5717
cusS UTI89_C0570 sensor kinase CusSchromosome CDS578907 1443 - 0.518364
dksA UTI89_C0159 DnaK suppressor proteinchromosome CDS166195 474 - 0.523207
dpiA UTI89_C0624 transcriptional regulatory protein DpiAchromosome CDS636312 681 + 0.509545
dpiB UTI89_C0623 sensor kinase DpiBchromosome CDS634625 1719 + 0.49331
envZ UTI89_C3904 osmolarity sensor protein EnvZchromosome CDS3787184 1353 - 0.56541
evgA UTI89_C2701 putative positive transcription regulatorchromosome CDS2645023 615 + 0.398374
evgS UTI89_C2702 sensor protein EvgS precursorchromosome CDS2645642 3594 + 0.409293
fhlA UTI89_C3094 formate hydrogenlyase transcriptional activatorchromosome CDS3013395 2115 + 0.518203
fliY UTI89_C2121 cystine-binding periplasmic protein precursorchromosome CDS2023332 858 - 0.491841
fnr UTI89_C1605 fumarate and nitrate reduction regulatory proteinchromosome CDS1517495 810 - 0.495062
gatA UTI89_C2367 galactitol-specific enzyme IIA of phosphotransferase systemchromosome CDS2315434 453 - 0.426049
glnE UTI89_C3489 glutamate-ammonia-ligase adenylyltransferasechromosome CDS3424603 2952 - 0.554201
glnH UTI89_C0814 periplasmic glutamine-binding protein; permeasechromosome CDS809931 747 - 0.483266
glnL UTI89_C4458 nitrogen regulation protein NR(II)chromosome CDS4341357 1050 - 0.552381
kdpD UTI89_C0699 sensor protein KdpDchromosome CDS703728 2688 - 0.576265
kdpE UTI89_C0698 transcriptional regulatory protein KdpEchromosome CDS703054 678 - 0.564897
lexA UTI89_C4613 LexA, subunit of LexA transcriptional repressorchromosome CDS4506034 609 + 0.518883
luxS UTI89_C3049 S-ribosylhomocysteinasechromosome CDS2973017 516 - 0.51938
narL UTI89_C1417 NarL transcriptional dual regulatorchromosome CDS1349427 717 - 0.514644
narP UTI89_C2471 nitrate/nitrite response regulator protein NarPchromosome CDS2427526 678 + 0.513274
narQ UTI89_C2795 nitrate/nitrite sensor protein NarQchromosome CDS2735342 1716 + 0.52331
narX UTI89_C1418 nitrate/nitrite sensor protein NarXchromosome CDS1350070 1797 - 0.531998
nrfB UTI89_C4661 NrfB, formate-dependent nitrite reductase; a penta-haeme cytochrome cchromosome CDS4558633 573 + 0.542757
ompR UTI89_C3905 transcriptional regulatory protein OmpRchromosome CDS3788533 720 - 0.548611
phoB UTI89_C0420 positive response regulator for pho regulonchromosome CDS431400 690 + 0.53913
phoH UTI89_C1083 PhoH proteinchromosome CDS1071747 924 + 0.525974
phoP UTI89_C1259 transcriptional regulatory proteinchromosome CDS1234756 672 - 0.473214
phoQ UTI89_C1258 sensor protein PhoQchromosome CDS1233296 1461 - 0.508556
phoR UTI89_C0421 phosphate regulon sensor protein PhoRchromosome CDS432147 1296 + 0.532407
pphA UTI89_C2039 serine/threonine protein phosphatase 1chromosome CDS1949003 660 - 0.480303
proQ UTI89_C2032 ProQ proteinchromosome CDS1941526 699 - 0.532189
pspA UTI89_C1574 phage shock protein Achromosome CDS1487396 669 + 0.491779
pspC UTI89_C1576 phage shock protein Cchromosome CDS1488342 360 + 0.505556
pspF UTI89_C1573 psp operon transcriptional activatorchromosome CDS1486253 993 - 0.51863
ptsN UTI89_C3640 nitrogen regulatory IIA proteinchromosome CDS3566232 516 + 0.515504
ptsP UTI89_C3231 phosphoenolpyruvate-protein phosphotransferase ptsPchromosome CDS3156625 2247 - 0.536271
qseC UTI89_C3451 sensor protein QseCchromosome CDS3387840 1350 + 0.528148
rcsA UTI89_C2151 positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression, subunit of RcsB transcriptional actchromosome CDS2050066 624 + 0.383013
rcsB UTI89_C2499 positive response regulator for colanic capsule biosynthesischromosome CDS2452435 696 + 0.468391
rcsC UTI89_C2500 sensor protein RcsCchromosome CDS2453330 2850 - 0.500351
relA UTI89_C3154 GTP pyrophosphokinasechromosome CDS3065874 2235 - 0.540492
rseA UTI89_C2894 sigma-E factor negative regulatory proteinchromosome CDS2850496 651 - 0.516129
rseB UTI89_C2893 sigma-E factor regulatory protein RseB precursorchromosome CDS2849540 957 - 0.513062
rseC UTI89_C2892 sigma-E factor regulatory protein RseCchromosome CDS2849064 480 - 0.552083
rssB UTI89_C1431 RssB/Hnr proteinchromosome CDS1365156 1014 + 0.485207
rstA UTI89_C1796 transcriptional regulatory protein RstAchromosome CDS1722529 780 + 0.485897
rstB UTI89_C1797 sensor protein RstBchromosome CDS1723312 1302 + 0.512289
rtcR UTI89_C3922 transcriptional regulator RtcRchromosome CDS3811082 1599 + 0.549719
rtn UTI89_C2453 hypothetical proteinchromosome CDS2410774 1557 + 0.499037
sgaA UTI89_C4795 putative PTS system enzyme II A component; subunit of SgaTBA, a putative PTS permeasechromosome CDS4693431 465 + 0.541936
smp UTI89_C5158 Smp protein precursorchromosome CDS5047839 645 - 0.564341
spoT UTI89_C4195 guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolasechromosome CDS4080932 2109 + 0.53817
torR UTI89_C1059 TorCAD operon transcriptional regulatory protein torRchromosome CDS1045535 693 - 0.535354
torS UTI89_C1056 sensor protein TorSchromosome CDS1041719 2733 - 0.540432
traR UTI89_P114 conjugal transfer protein TraRpUTI89 CDS84628 222 + 0.427928
typA UTI89_C4460 putative GTP-binding factorchromosome CDS4344362 1824 + 0.532895
uhpA UTI89_C4225 response regulator for uhpBA two component regulatory systemchromosome CDS4116156 591 - 0.58714
uhpB UTI89_C4224 sensor protein UhpBchromosome CDS4114654 1503 - 0.564205
umuD UTI89_C1369 UmuD proteinchromosome CDS1303519 420 + 0.480952
uspA UTI89_C4014 universal stress protein Achromosome CDS3901904 435 + 0.494253
uspG UTI89_C0610 universal stress protein UspGchromosome CDS625223 462 - 0.47619
uvrY UTI89_C2115 putative 2-component transcriptional regulatorchromosome CDS2018450 657 - 0.496195
wzb UTI89_C2335 tyrosine phosphatasechromosome CDS2273304 444 - 0.542793
yahA UTI89_C0344 hypothetical protein YahAchromosome CDS358334 1095 + 0.454795
yaiC UTI89_C0404 hypothetical proteinchromosome CDS417940 1116 + 0.537634
ybeJ UTI89_C0651 glutamate/aspartate periplasmic binding protein precursorchromosome CDS660758 978 - 0.486708
ybeZ UTI89_C0658 putative ATP-binding protein in pho regulonchromosome CDS667122 1080 - 0.541667
ycdT UTI89_C1088 hypothetical protein YcdTchromosome CDS1079368 1491 + 0.376928
ycgF UTI89_C1346 hypothetical protein YcgFchromosome CDS1290600 1290 - 0.428682
yciR UTI89_C1558 hypothetical protein YciRchromosome CDS1465687 1986 - 0.483887
ydaA UTI89_C1604 hypothetical proteinchromosome CDS1516393 951 - 0.506835
ydaM UTI89_C1612 hypothetical protein YdaMchromosome CDS1523719 1293 - 0.469451
ydeH UTI89_C1760 hypothetical protein YdeHchromosome CDS1685921 897 - 0.444816
ydiV UTI89_C1900 hypothetical protein YdiVchromosome CDS1826894 714 - 0.414566
yeaG UTI89_C1979 hypothetical proteinchromosome CDS1899159 1935 + 0.499225
yeaJ UTI89_C1982 hypothetical protein YeaJchromosome CDS1904112 1671 + 0.454817
yeaP UTI89_C1991 hypothetical protein YeaPchromosome CDS1909837 1155 + 0.464935
yecG UTI89_C2096 hypothetical protein YecGchromosome CDS2003511 429 + 0.449883
yedV UTI89_C2167 putative 2-component sensor proteinchromosome CDS2062818 1359 - 0.396615
yedW UTI89_C2168 putative 2-component transcriptional regulator yedWchromosome CDS2064176 783 - 0.436782
yegE UTI89_C2343 putative sensor-type proteinchromosome CDS2281386 3318 + 0.524111
yehT UTI89_C2397 hypothetical proteinchromosome CDS2353464 735 - 0.502041
yehU UTI89_C2398 putative 2-component sensor proteinchromosome CDS2354180 1701 - 0.510876
yeiL UTI89_C2437 regulatory protein YeiLchromosome CDS2395336 699 + 0.433476
yfeA UTI89_C2726 hypothetical protein YfeAchromosome CDS2675566 2250 - 0.477778
yfgF UTI89_C2819 hypothetical protein YfgFchromosome CDS2762518 2244 - 0.467914
yfhA UTI89_C2873 hypothetical protein YfhAchromosome CDS2829197 1374 - 0.548763
yfhK UTI89_C2876 putative sensor-like histidine kinase YfhKchromosome CDS2831399 1491 - 0.529846
yfiN UTI89_C2937 hypothetical protein YfiNchromosome CDS2886582 1227 + 0.480033
ygaA UTI89_C3071 hypothetical sigma-54-dependent transcriptional regulator ygaAchromosome CDS2989169 1515 - 0.566337
ygeV UTI89_C3254 hypothetical sigma-54-dependent transcriptional regulator ygeVchromosome CDS3182854 1779 - 0.459809
ygiM UTI89_C3491 hypothetical proteinchromosome CDS3429009 621 + 0.523349
ygiX UTI89_C3450 transcriptional Regulatory protein QseBchromosome CDS3387184 660 + 0.525758
yhdA UTI89_C3683 hypothetical protein YhdAchromosome CDS3610777 1941 - 0.503864
yhiE UTI89_C4043 hypothetical proteinchromosome CDS3925067 606 + 0.344884
yhjB UTI89_C4052 hypothetical transcriptional regulator YhjBchromosome CDS3938071 603 - 0.474295
yhjH UTI89_C4057 hypothetical protein YhjHchromosome CDS3945040 771 - 0.523995
yiiT UTI89_C4507 hypothetical proteinchromosome CDS4390255 429 + 0.435897
yjcC UTI89_C4647 hypothetical protein YjcCchromosome CDS4544234 1596 + 0.446742
yjdG UTI89_C4718 DcuR transcriptional activatorchromosome CDS4621424 720 - 0.494444
yjdH UTI89_C4719 sensor protein DcuSchromosome CDS4622140 1632 - 0.500613
yjfJ UTI89_C4782 hypothetical proteinchromosome CDS4682277 699 + 0.509299
yjiY UTI89_C5057 hypothetical protein YjiYchromosome CDS4963197 2166 - 0.560942
yjjQ UTI89_C5071 hypothetical protein YjjQchromosome CDS4981247 726 + 0.450413
ylaB UTI89_C0484 hypothetical protein YlaBchromosome CDS491197 1557 - 0.480411
ylcA UTI89_C0571 putative 2-component transcriptional regulatorchromosome CDS580339 684 - 0.545322
yliE UTI89_C0836 hypothetical protein YliEchromosome CDS834193 2349 + 0.411665
yliF UTI89_C0837 hypothetical membrane protein YliFchromosome CDS836549 1329 + 0.428894
ymfK UTI89_C3004 putative phage repressorchromosome CDS2935003 675 + 0.447407
ynaF UTI89_C1617 hypothetical proteinchromosome CDS1531431 507 - 0.475345
yneF UTI89_C1741 hypothetical protein YneFchromosome CDS1668127 1419 - 0.487667
yojN UTI89_C2498 putative sensor-like histidine kinase YojNchromosome CDS2449791 2673 + 0.49682
ypdA UTI89_C2712 hypothetical protein YpdAchromosome CDS2659939 1698 + 0.509423
ypdB UTI89_C2713 hypothetical protein YpdBchromosome CDS2661633 756 + 0.47619
zraS UTI89_C3816 sensor protein ZraSchromosome CDS3703026 1377 - 0.544662