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2024-05-18 05:57:46

Gene list

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COG category: Signal transduction mechanisms
Organism: Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2

Number of genes found: 180

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Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t2807 possible serine/threonine protein phosphatasechromosome CDS2885097 657 + 0.414003
NA t1187 hypothetical proteinchromosome CDS1256434 486 + 0.493827
NA t1565 hypothetical proteinchromosome CDS1625946 948 + 0.516878
NA t1050 hypothetical proteinchromosome CDS1133049 1602 - 0.532459
NA t1011 hypothetical proteinchromosome CDS1094385 1131 - 0.498674
NA t3945 methyl-accepting chemotaxis citrate transducerchromosome CDS4084162 1644 - 0.555353
NA t1561 putative chemo-receptor proteinchromosome CDS1621946 1155 - 0.490909
NA t4594 hypothetical proteinchromosome CDS4748535 1065 - 0.498592
NA t3734 hypothetical proteinchromosome CDS3849865 381 + 0.464567
NA t0083 probable secreted proteinchromosome CDS94577 291 - 0.474227
NA t0354 hypothetical proteinchromosome CDS420336 2214 + 0.473351
NA t3098 probable two-component system response regulator.chromosome CDS3183796 660 + 0.554545
NA t0503 putative transcriptional regulatorchromosome CDS575392 1428 - 0.521709
NA t3302 hypothetical proteinchromosome CDS3397022 1611 + 0.555556
NA t1143 putative regulatory proteinchromosome CDS1214696 594 + 0.367003
NA t4590 conserved hypothetical regulatory proteinchromosome CDS4745606 726 + 0.435262
NA t1611 hypothetical proteinchromosome CDS1664447 708 - 0.492938
NA t1374 hypothetical proteinchromosome CDS1430275 546 - 0.587912
NA t0292 putative sensor kinase proteinchromosome CDS333203 1386 + 0.546898
NA t4331 hypothetical proteinchromosome CDS4487253 228 - 0.578947
NA t4520 protein kinasechromosome CDS4669143 1074 - 0.349162
NA t0891 hypothetical proteinchromosome CDS991424 1704 + 0.531103
NA t1525 putative phosphotransferase enzymechromosome CDS1580958 438 + 0.570776
NA t1164 hypothetical proteinchromosome CDS1229714 1935 - 0.505426
NA t2518 putative rtn proteinchromosome CDS2592554 1575 - 0.48254
NA t4591 conserved hypothetical regulatory proteinchromosome CDS4746340 627 + 0.497608
NA t1616 hypothetical proteinchromosome CDS1672015 1983 + 0.505295
NA t0549 putative receptor/regulator proteinchromosome CDS625474 1005 - 0.514428
NA t1031 hypothetical proteinchromosome CDS1114964 585 + 0.509402
NA t3408 hypothetical proteinchromosome CDS3505098 228 + 0.565789
NA t3123 hypothetical proteinchromosome CDS3211540 615 + 0.505691
NA t4320 putative capsid proteinchromosome CDS4475817 834 - 0.586331
NA t2312 hypothetical proteinchromosome CDS2376599 312 + 0.439103
NA t1225 hypothetical proteinchromosome CDS1291241 714 + 0.457983
NA t0734 hypothetical proteinchromosome CDS814284 444 + 0.36036
NA t0520 putative sugar phosphotransferase component II Achromosome CDS592560 444 + 0.5
NA t4519 protein kinasechromosome CDS4668070 1077 - 0.363045
NA t0477 phosphohistidine phosphatasechromosome CDS551847 486 + 0.545267
NA t2215 putative sigma-54 dependent transcriptional regulatorchromosome CDS2279849 1929 - 0.498186
NA t1555 hypothetical proteinchromosome CDS1614358 435 + 0.482759
NA t3059 hypothetical proteinchromosome CDS3142008 1056 - 0.427083
NA t1664 putative regulatory proteinchromosome CDS1724423 1014 - 0.509862
NA t0031 hypothetical proteinchromosome CDS32549 450 - 0.368889
NA t1536 putative periplasmic amino acid-binding proteinchromosome CDS1591379 762 + 0.389764
NA t4312 putative regulatory proteinchromosome CDS4471805 426 - 0.619718
NA t4274 hypothetical proteinchromosome CDS4439479 1431 + 0.518519
NA t4635 putative transcriptional regulator proteinchromosome CDS4788268 672 - 0.431548
NA t3099 probable two-component system sensor histidine kinasechromosome CDS3184452 1350 + 0.566667
NA t4521 hypothetical proteinchromosome CDS4670191 1164 - 0.373711
NA t3387 hypothetical proteinchromosome CDS3489123 429 - 0.482517
NA t1896 putative bacteriophage proteinchromosome CDS1952716 261 - 0.421456
NA t2543 probable secreted proteinchromosome CDS2620356 408 + 0.465686
aceK t4113 bifunctional isocitrate dehydrogenase kinase/phosphatase proteinchromosome CDS4252425 1782 + 0.530864
adrA t2479 adrA proteinchromosome CDS2550371 1113 - 0.551662
air t3137 aerotaxis receptor proteinchromosome CDS3225753 1521 - 0.557528
apaH t0091 diadenosinetetraphosphatasechromosome CDS101219 849 - 0.55477
arcA t4637 global response regulatorchromosome CDS4789899 717 - 0.521618
arcB t3245 aerobic respiration control sensor proteinchromosome CDS3330509 2337 - 0.51733
argT t0509 lysine-arginine-ornithine-binding periplasmic protein precursorchromosome CDS583399 783 + 0.512133
artI t2006 arginine-binding periplasmic protein 1 precursorchromosome CDS2065628 732 + 0.51776
artJ t2009 arginine-binding periplasmic protein 2 precursorchromosome CDS2067987 732 + 0.487705
artJ t4403 probable arginine-binding periplasmic proteinchromosome CDS4554888 720 - 0.494444
baeR t0741 putative two-component system response regulatorchromosome CDS820714 723 - 0.532503
baeS t0742 putative two-component system sensor kinasechromosome CDS821433 1404 - 0.568376
barA t2867 sensor proteinchromosome CDS2947953 2757 + 0.529198
bolA t2414 BolA proteinchromosome CDS2487635 318 - 0.490566
cheA t0956 chemotaxis protein CheAchromosome CDS1042321 2016 + 0.549603
cheB t0960 chemotaxis-specific methylesterasechromosome CDS1047782 1050 + 0.557143
cheM t3136 methyl-accepting chemotaxis protein IIchromosome CDS3223797 1569 - 0.500956
cheR t0959 chemotaxis protein methyltransferasechromosome CDS1046919 867 + 0.524798
cheW t0957 purine binding chemotaxis proteinchromosome CDS1044357 504 + 0.529762
cheY t0961 chemotaxis protein CheYchromosome CDS1048849 390 + 0.512821
cheZ t0962 chemotaxis protein CheZchromosome CDS1049249 645 + 0.578295
citA t0055 sensor kinase CitAchromosome CDS61791 1620 - 0.478395
citB t0054 transcriptional regulatory protein CitBchromosome CDS61103 687 - 0.484716
copR t1823 response regulatorchromosome CDS1885974 747 + 0.502008
copS t1824 histidine kinasechromosome CDS1886713 1365 + 0.514286
cpxA t3561 two-component sensor proteinchromosome CDS3661344 1374 + 0.572052
cpxP t3559 extracytoplasmic stress protein for protein-mediated toxicitieschromosome CDS3659998 501 - 0.506986
cpxR t3560 two-component response regulatory proteinchromosome CDS3660649 699 + 0.546495
creB t4627 putative two-component response regulatorchromosome CDS4778770 690 + 0.57971
creC t4628 putative two-component sensor kinasechromosome CDS4779459 1425 + 0.581754
crp t4039 cyclic AMP receptor protein,catabolite gene activatorchromosome CDS4197972 633 - 0.505529
csrA t2727 carbon storage regulatorchromosome CDS2809707 186 - 0.510753
cstA t4582 probable carbon starvation proteinchromosome CDS4734842 2151 - 0.574152
cstA t2268 carbon starvation protein Achromosome CDS2333604 2106 - 0.569326
dcuR t4210 two-component response regulatorchromosome CDS4378944 720 - 0.490278
dcuS t4211 two-component sensor kinasechromosome CDS4379660 1632 - 0.530637
dksA t0194 dosage-dependent dnaK suppressor proteinchromosome CDS220797 456 - 0.532895
dpiA t2241 transcriptional regulatory protein DpiAchromosome CDS2305970 681 - 0.53304
dpiB t2242 sensor kinase DpiBchromosome CDS2306619 1662 - 0.518652
ecnR t4389 transcriptional regulatory proteinchromosome CDS4540052 588 - 0.462585
envZ t4005 osmolarity sensor proteinchromosome CDS4155629 1353 + 0.574279
fimZ t2314 probable transcriptional regulatorchromosome CDS2378255 633 + 0.407583
fliY t0922 cystine-binding periplasmic protein precursorchromosome CDS1018264 801 + 0.515606
fnr t1564 fumarate and nitrate reduction regulatory proteinchromosome CDS1625001 795 + 0.493082
gatA t3178 galactitol-specific IIA component of PTS systemchromosome CDS3270768 465 + 0.539785
glnE t3121 adenyl-transferasechromosome CDS3207036 2844 - 0.57384
glnG t3616 two-component system, response regulatorchromosome CDS3716723 1410 + 0.560993
glnH t2058 glutamine ABC transporter periplasmic-binding proteinchromosome CDS2120268 747 + 0.488621
glnL t3615 two-component system sensory histidine kinasechromosome CDS3715665 1050 + 0.571429
hisJ t0510 histidine-binding periplasmic proteinchromosome CDS584419 783 + 0.518519
hydG t3457 transcriptional regulatory proteinchromosome CDS3547029 1326 - 0.555807
hydH t3458 two-component system sensor proteinchromosome CDS3548360 1398 - 0.544349
kdpD t2173 sensor protein KdpDchromosome CDS2235518 2685 + 0.585847
kdpE t2172 KDP operon transcriptional regulatory proteinchromosome CDS2238199 678 + 0.564897
lexA t4143 LexA repressorchromosome CDS4289021 609 + 0.545156
luxS t2714 S-ribosylhomocysteinasechromosome CDS2805022 516 - 0.531008
narL t1675 nitrate/nitrite response regulator protein NarLchromosome CDS1741013 651 + 0.533026
narP t0618 nitrate/nitrite response regulator proteinchromosome CDS700413 648 - 0.524691
narQ t0379 nitrate/nitrite sensor proteinchromosome CDS451146 1701 - 0.537331
narX t1676 nitrate/nitrite sensor protein NarXchromosome CDS1739224 1797 + 0.540901
ompR t4004 osmolarity response regulatorchromosome CDS4154913 720 + 0.565278
pgtA t0462 phosphoglycerate transport system transcriptional regulatory protein PgtAchromosome CDS536267 1248 + 0.519231
pgtB t0461 phosphoglycerate transport system sensor protein PgtBchromosome CDS534271 2007 + 0.539611
phoB t2467 phosphate regulon transcriptional regulatory protein PhoBchromosome CDS2538122 690 - 0.547826
phoH t1795 PhoH proteinchromosome CDS1855553 855 - 0.507602
phoP t1689 transcriptional regulatory protein PhoPchromosome CDS1752335 675 + 0.512593
phoQ t1690 sensor protein PhoQchromosome CDS1753009 1464 + 0.518443
phoR t2466 phosphate regulon sensor protein PhoRchromosome CDS2536757 1296 - 0.535494
pmrA t4199 two-component response regulatorchromosome CDS4363487 669 - 0.539611
pmrB t4198 two-component sensor kinasechromosome CDS4362407 1080 - 0.552778
pphA t1025 serine/threonine protein phosphatase 1chromosome CDS1108195 651 + 0.52381
proP t1032 putative solute/DNA competence effectorchromosome CDS1115646 687 + 0.535662
prpR t2497 propionate catabolism operon regulatory proteinchromosome CDS2571825 1626 + 0.555351
pspA t1595 phage shock protein Achromosome CDS1653140 669 - 0.512706
pspC t1593 phage shock protein Cchromosome CDS1652497 360 - 0.522222
pspF t1596 psp operon transcriptional activator PspFchromosome CDS1653979 981 + 0.545362
ptsN t3239 nitrogen regulatory IIA proteinchromosome CDS3326292 492 + 0.530488
ptsP t2912 phosphoenolpyruvate-protein phosphotransferasechromosome CDS3002049 2247 - 0.569203
rcsA t0895 colanic acid capsullar biosynthesis activation protein Achromosome CDS994820 624 - 0.386218
rcsB t0595 regulator of capsule synthesis B componentchromosome CDS677119 651 - 0.493088
rcsC t0594 sensor protein RcsCchromosome CDS674170 2847 + 0.533895
relA t2865 GTP pyrophosphokinasechromosome CDS2944314 2235 - 0.5566
rseA t0271 sigma-E factor negative regulatory proteinchromosome CDS309850 651 + 0.542243
rseB t0272 periplasmic negative regulator of sigmaEchromosome CDS310500 957 + 0.546499
rseC t0273 sigma-E factor regulatory protein RseCchromosome CDS311453 480 + 0.579167
rstA t1343 putative two-component response regulatorchromosome CDS1405300 732 - 0.530055
rstB t1339 two component sensor kinasechromosome CDS1400397 1305 - 0.536398
rtn t0640 Rtn proteinchromosome CDS722215 1557 - 0.518947
sgaA t4436 probable sugar phosphotransferasechromosome CDS4585406 465 + 0.539785
sipB t2787 pathogenicity island 1 effector proteinchromosome CDS2866971 1782 - 0.523008
sirA t0929 response regulatorchromosome CDS1023352 657 + 0.512938
spoT t3776 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolasechromosome CDS3897616 2112 - 0.536458
sseB t1266 putative pathogenicity island effector proteinchromosome CDS1338340 591 + 0.431472
ssrA t1260 putative two-component sensor kinasechromosome CDS1331303 2763 - 0.420919
ssrB t1259 putative two-component response regulatorchromosome CDS1330634 639 - 0.402191
stpA t2780 tyrosine phosphatasechromosome CDS2859938 1632 - 0.436274
tar t0958 methyl-accepting chemotaxis protein IIchromosome CDS1045097 1662 + 0.556558
tctD t2679 transcriptional regulatorchromosome CDS2772681 675 - 0.548148
tctE t2678 putative two-component system sensor kinasechromosome CDS2771279 1416 - 0.561441
torS t3692 two-component sensor protein histidine protein kinase.chromosome CDS3805026 2736 - 0.544225
ttrR t1255 putative two-component response regulatorchromosome CDS1327570 621 + 0.553945
ttrS t1254 hypothetical proteinchromosome CDS1325817 1779 + 0.567735
typA t3613 GTP-binding proteinchromosome CDS3711782 1824 - 0.539474
uhpA t3728 two-component system response regulator proteinchromosome CDS3843142 591 + 0.590525
uhpB t3729 two-component system sensor histidine kinasechromosome CDS3843732 1503 + 0.619428
umuD t0880 UmuD proteinchromosome CDS981317 420 + 0.5
uspA t3925 universal stress protein Achromosome CDS4063524 435 - 0.510345
wzb t0755 putative protein-tyrosine phosphatasechromosome CDS844467 450 + 0.571111
yaeG t0211 hypothetical proteinchromosome CDS243071 1158 + 0.544905
ybdQ t2253 hypothetical proteinchromosome CDS2318472 429 + 0.515152
ybeJ t2208 ABC transporter periplasmic binding proteinchromosome CDS2274555 927 + 0.511327
ybeZ t2204 PhoH-like ATP-binding proteinchromosome CDS2270006 1086 + 0.538674
ybiI t2063 hypothetical Zinc-finger containing proteinchromosome CDS2126002 267 + 0.509363
yecG t0950 hypothetical proteinchromosome CDS1038262 396 - 0.515152
yegE t0749 hypothetical proteinchromosome CDS834453 2991 - 0.541291
yehT t0697 putative two-component system response regulatorchromosome CDS783892 720 + 0.505556
yehU t0696 putative two-component system sensor kinasechromosome CDS782210 1686 + 0.527283
yfeA t0447 hypothetical proteinchromosome CDS515355 2190 + 0.509589
yfhA t0293 putative transcriptional regulatorchromosome CDS335351 1338 + 0.554559
yfiN t2627 hypothetical proteinchromosome CDS2704600 1221 + 0.498771
ygaA t2741 anaerobic nitric oxide reductase transcription regulatorchromosome CDS2822112 1521 - 0.594346
yhdA t3290 putative lipoproteinchromosome CDS3383963 1941 - 0.535291
yhjB t3911 hypothetical luxR-family transcriptional regulatorchromosome CDS4047994 603 + 0.477612
yhjH t3906 hypothetical proteinchromosome CDS4040713 768 + 0.53125
yhjK t3902 hypothetical proteinchromosome CDS4034376 1932 + 0.554348
yjcC t4170 hypothetical proteinchromosome CDS4332156 1602 + 0.475031
ylaB t2392 hypothetical 58.9 kDa proteinchromosome CDS2462113 1551 + 0.520954
yojN t0596 putative two-component system sensor kinasechromosome CDS677786 2670 - 0.515356