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2024-05-18 08:50:27

Gene list

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COG category: Signal transduction mechanisms
Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

Number of genes found: 185

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Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA HCM2.0100c hypothetical proteinpHCM2 CDS79214 642 - 0.538941
NA STY0095 probable secreted proteinchromosome CDS94586 291 - 0.474227
NA STY3354 probable two-component system response regulator.chromosome CDS3198301 660 + 0.554545
NA STY1448 putative phosphotransferase enzymechromosome CDS1399786 438 - 0.570776
NA STY2574 putative sugar phosphotransferase component II Achromosome CDS2411709 444 - 0.5
NA STY1614 hypothetical proteinchromosome CDS1549845 546 + 0.587912
NA STY4945 putative transcriptional regulator proteinchromosome CDS4805344 672 - 0.431548
NA STY1805 hypothetical proteinchromosome CDS1724211 486 - 0.493827
NA STY4638 hypothetical proteinchromosome CDS4503667 228 - 0.578947
NA STY1416 hypothetical proteinchromosome CDS1366390 435 - 0.482759
NA STY1354 hypothetical proteinchromosome CDS1316029 708 + 0.492938
NA STY2194 hypothetical proteinchromosome CDS2033361 1704 - 0.531103
NA STY1957 hypothetical proteinchromosome CDS1846482 1602 + 0.532459
NA STY2043 putative bacteriophage proteinchromosome CDS1912209 393 - 0.475827
NA STY3666 hypothetical proteinchromosome CDS3519440 228 + 0.565789
NA STY4901 conserved hypothetical regulatory proteinchromosome CDS4763416 627 + 0.497608
NA STY1856 putative regulatory proteinchromosome CDS1765843 594 - 0.367003
NA STY3030 possible serine/threonine protein phosphatasechromosome CDS2899240 657 + 0.414003
NA HCM1.91c hypothetical proteinpHCM1 CDS60924 972 - 0.445473
NA STY4822 protein kinasechromosome CDS4685181 1077 - 0.363045
NA STY3355 probable two-component system sensor histidine kinasechromosome CDS3198957 1350 + 0.566667
NA HCM1.227c hypothetical proteinpHCM1 CDS170658 708 - 0.635593
NA STY2619 phosphohistidine phosphatasechromosome CDS2452380 486 - 0.545267
NA STY3382 hypothetical proteinchromosome CDS3226045 615 + 0.505691
NA HCM2.0026c putative PhoH-like proteinpHCM2 CDS19116 834 - 0.526379
NA STY4823 protein kinasechromosome CDS4686254 1074 - 0.349162
NA STY4626 putative capsid proteinchromosome CDS4492225 834 - 0.586331
NA STY1438 putative periplasmic amino acid-binding proteinchromosome CDS1389041 762 - 0.389764
NA STY1766 hypothetical proteinchromosome CDS1689176 714 - 0.457983
NA STY0376 putative rtn proteinchromosome CDS386985 1575 + 0.48254
NA STY0035 hypothetical proteinchromosome CDS32549 450 - 0.368889
NA STY1349 hypothetical proteinchromosome CDS1307186 1983 - 0.505799
NA STY3309 hypothetical proteinchromosome CDS3156513 1056 - 0.427083
NA STY4900 conserved hypothetical regulatory proteinchromosome CDS4762682 726 + 0.435262
NA STY2351 hypothetical proteinchromosome CDS2189209 444 - 0.36036
NA STY3998 hypothetical proteinchromosome CDS3864375 381 + 0.464567
NA STY0703 putative sigma-54 dependent transcriptional regulatorchromosome CDS699294 1929 + 0.498186
NA STY2744 hypothetical proteinchromosome CDS2582300 2214 - 0.473351
NA STY2591 putative transcriptional regulatorchromosome CDS2427893 1428 + 0.521709
NA STY1045 putative bacteriophage proteinchromosome CDS1028101 261 + 0.421456
NA STY3568 hypothetical proteinchromosome CDS3411528 1611 + 0.555556
NA STY0599 hypothetical proteinchromosome CDS604191 312 - 0.439103
NA STY4618 putative regulatory proteinchromosome CDS4488213 426 - 0.619718
NA STY0352 probable secreted proteinchromosome CDS360350 408 - 0.465686
NA STY2811 putative sensor kinase proteinchromosome CDS2670261 1386 - 0.546898
NA STY3645 hypothetical proteinchromosome CDS3503465 429 - 0.482517
NA STY2005 hypothetical proteinchromosome CDS1885617 1131 + 0.498674
NA STY4577 hypothetical proteinchromosome CDS4454829 1431 + 0.518519
NA STY1408 putative chemo-receptor proteinchromosome CDS1358082 1155 + 0.490909
NA STY1978 hypothetical proteinchromosome CDS1865584 585 - 0.509402
NA STY4234 methyl-accepting chemotaxis citrate transducerchromosome CDS4099515 1644 - 0.555353
NA STY1831 hypothetical proteinchromosome CDS1749484 1935 + 0.505426
NA STY2545 putative receptor/regulator proteinchromosome CDS2378234 1005 + 0.514428
NA STY1403 hypothetical proteinchromosome CDS1354289 948 - 0.516878
NA STY4824 hypothetical proteinchromosome CDS4687302 1164 - 0.37457
NA STY4904 hypothetical proteinchromosome CDS4765611 1065 - 0.498592
NA STY1297 putative regulatory proteinchromosome CDS1255747 1014 + 0.510848
aceK STY4403 bifunctional isocitrate dehydrogenase kinase/phosphatase proteinchromosome CDS4267775 1782 + 0.530864
adrA STY0418 adrA proteinchromosome CDS429630 1113 + 0.551662
air STY3395 aerotaxis receptor proteinchromosome CDS3240258 1521 - 0.557528
apaH STY0103 diadenosinetetraphosphatasechromosome CDS101228 849 - 0.55477
arcA STY4947 global response regulatorchromosome CDS4806975 717 - 0.521618
arcB STY3507 aerobic respiration control sensor proteinchromosome CDS3345014 2337 - 0.51733
argT STY2585 lysine-arginine-ornithine-binding periplasmic protein precursorchromosome CDS2420531 783 - 0.512133
artI STY0923 arginine-binding periplasmic protein 1 precursorchromosome CDS914718 732 - 0.516393
artJ STY0920 arginine-binding periplasmic protein 2 precursorchromosome CDS912359 732 - 0.487705
artJ STY4711 probable arginine-binding periplasmic proteinchromosome CDS4571986 720 - 0.494444
baeR STY2344 putative two-component system response regulatorchromosome CDS2182500 723 + 0.532503
baeS STY2343 putative two-component system sensor kinasechromosome CDS2181100 1404 + 0.568376
barA STY3096 sensor proteinchromosome CDS2962058 2757 + 0.529198
bolA STY0488 BolA proteinchromosome CDS493149 318 + 0.490566
cheA STY2130 chemotaxis protein CheAchromosome CDS1982145 2016 - 0.549603
cheB STY2126 chemotaxis-specific methylesterasechromosome CDS1977650 1050 - 0.55619
cheM STY3394 methyl-accepting chemotaxis protein IIchromosome CDS3238302 1569 - 0.500319
cheR STY2127 chemotaxis protein methyltransferasechromosome CDS1978696 867 - 0.524798
cheW STY2129 purine binding chemotaxis proteinchromosome CDS1981621 504 - 0.529762
cheY STY2125 chemotaxis protein CheYchromosome CDS1977243 390 - 0.512821
cheZ STY2124 chemotaxis protein CheZchromosome CDS1976588 645 - 0.578295
citA STY0062 sensor kinase citachromosome CDS61791 1620 - 0.477778
citB STY0061 transcriptional regulatory protein citbchromosome CDS61103 687 - 0.484716
copR STY1128 response regulatorchromosome CDS1094093 747 - 0.502008
copS STY1127 histidine kinasechromosome CDS1092736 1365 - 0.515018
cpxA STY3813 two-component sensor proteinchromosome CDS3675681 1374 + 0.572052
cpxP STY3811 extracytoplasmic stress protein for protein-mediated toxicitieschromosome CDS3674335 501 - 0.506986
cpxR STY3812 two-component response regulatory proteinchromosome CDS3674986 699 + 0.546495
creB STY4935 putative two-component response regulatorchromosome CDS4795846 690 + 0.57971
creC STY4936 putative two-component sensor kinasechromosome CDS4796535 1425 + 0.582456
crp STY4331 cyclic AMP receptor protein,catabolite gene activatorchromosome CDS4213325 633 - 0.505529
csrA STY2947 carbon storage regulatorchromosome CDS2823850 186 - 0.510753
cstA STY0644 carbon starvation protein Achromosome CDS645392 2106 + 0.569326
cstA STY4890 probable carbon starvation proteinchromosome CDS4751918 2151 - 0.574152
dcuR STY4501 two-component response regulatorchromosome CDS4394294 720 - 0.490278
dcuS STY4502 two-component sensor kinasechromosome CDS4395010 1632 - 0.530637
dksA STY0211 dosage-dependent dnaK suppressor proteinchromosome CDS220806 456 - 0.532895
dpiA STY0675 transcriptional regulator CriRchromosome CDS674421 681 + 0.53304
dpiB STY0674 sensor kinase DpiBchromosome CDS672791 1662 + 0.518652
ecnR STY4697 transcriptional regulatory proteinchromosome CDS4557150 588 - 0.462585
envZ STY4295 osmolarity sensor proteinchromosome CDS4170982 1353 + 0.574279
fimZ STY0596 probable transcriptional regulator (FimXZ protein)chromosome CDS602214 633 - 0.407583
fliY STY2162 cystine-binding periplasmic protein precursorchromosome CDS2007417 801 - 0.515606
fnr STY1404 fumarate and nitrate reduction regulatory proteinchromosome CDS1355387 795 - 0.493082
gatA STY3441 PTS system, galactitol-specific IIA componentchromosome CDS3285273 465 + 0.539785
glnE STY3380 adenyl-transferasechromosome CDS3221541 2844 - 0.57384
glnG STY3876 Two-component system, response regulatorchromosome CDS3731061 1410 + 0.560993
glnH STY0868 glutamine ABC transporter periplasmic-binding proteinchromosome CDS860063 747 - 0.488621
glnL STY3875 Two-component system sensory histidine kinasechromosome CDS3730003 1050 + 0.571429
hisJ STY2584 histidine-binding periplasmic proteinchromosome CDS2419511 783 - 0.518519
hydG STY3711 transcriptional regulatory proteinchromosome CDS3561370 1326 - 0.555807
hydH STY3712 two-component system sensor proteinchromosome CDS3562701 1398 - 0.545064
kdpD STY0744 sensor protein KdpDchromosome CDS742869 2709 - 0.586932
kdpE STY0743 KDP operon transcriptional regulatory proteinchromosome CDS742195 678 - 0.564897
lexA STY4433 LexA repressorchromosome CDS4304371 609 + 0.545156
luxS STY2943 S-ribosylhomocysteinasechromosome CDS2819165 516 - 0.532946
mucA HCM1.252 putative DNA-repair modulatorpHCM1 CDS185798 435 + 0.521839
narL STY1285 nitrate/nitrite response regulator protein NarLchromosome CDS1239520 651 - 0.533026
narP STY2472 nitrate/nitrite response regulator protein NarPchromosome CDS2303653 648 + 0.524691
narQ STY2718 nitrate/nitrite sensor protein NarQchromosome CDS2551867 1701 + 0.537331
narX STY1286 nitrate/nitrite sensor protein NarXchromosome CDS1240163 1797 - 0.541458
ompR STY4294 osmolarity response regulatorchromosome CDS4170266 720 + 0.565278
pgtA STY2633 phosphoglycerate transport system transcriptional regulatory protein PgtAchromosome CDS2467198 1248 - 0.519231
pgtB STY2634 phosphoglycerate transport system sensor protein PgtBchromosome CDS2468435 2007 - 0.539611
phoB STY0432 phosphate regulon transcriptional regulatory protein PhoBchromosome CDS442289 690 + 0.547826
phoH STY1162 PhoH protein (phosphate starvation-inducible protein PsiH)chromosome CDS1124406 855 + 0.507602
phoP STY1271 transcriptional regulatory protein PhoP, regulator of virulence determinantschromosome CDS1228174 675 - 0.512593
phoQ STY1270 sensor protein PhoQ, regulator of virulence determinantschromosome CDS1226711 1464 - 0.518443
phoR STY0433 phosphate regulon sensor protein PhoRchromosome CDS443048 1296 + 0.535494
pmrA STY4491 two-component response regulatorchromosome CDS4378837 669 - 0.539611
pmrB STY4490 two-component sensor kinasechromosome CDS4377757 1080 - 0.552778
pphA STY1984 serine/threonine protein phosphatase 1chromosome CDS1872287 651 - 0.52381
proP STY1977 putative solute/DNA competence effectorchromosome CDS1864800 687 - 0.535662
prpR STY0399 propionate catabolism operon regulatory proteinchromosome CDS407663 1626 - 0.555351
pspA STY1371 phage shock protein Achromosome CDS1327374 669 + 0.512706
pspC STY1373 phage shock protein Cchromosome CDS1328326 360 + 0.522222
pspF STY1370 psp operon transcriptional activator PspFchromosome CDS1326223 981 - 0.545362
ptsN STY3501 nitrogen regulatory IIA proteinchromosome CDS3340797 492 + 0.530488
ptsP STY3144 phosphoenolpyruvate-protein phosphotransferasechromosome CDS3016154 2247 - 0.569203
rcsA STY2190 colanic acid capsullar biosynthesis activation protein Achromosome CDS2031045 624 + 0.386218
rcsB STY2495 regulator of capsule synthesis B componentchromosome CDS2326944 651 + 0.493088
rcsC STY2496 sensor protein RcsCchromosome CDS2327697 2847 - 0.533895
relA STY3094 GTP pyrophosphokinasechromosome CDS2958419 2235 - 0.5566
rseA STY2832 sigma-E factor negative regulatory proteinchromosome CDS2694349 651 - 0.542243
rseB STY2831 periplasmic negative regulator of sigmaEchromosome CDS2693393 957 - 0.546499
rseC STY2830 sigma-E factor regulatory protein RseCchromosome CDS2692917 480 - 0.579167
rstA STY1647 putative two-component response regulatorchromosome CDS1575105 732 + 0.530055
rstB STY1651 two component sensor kinasechromosome CDS1579435 1305 + 0.536398
rtn STY2451 rtn proteinchromosome CDS2280943 1557 + 0.518947
sgaA STY4741 probable sugar phosphotransferasechromosome CDS4602503 465 + 0.539785
sipB STY3008 pathogenicity island 1 effector proteinchromosome CDS2881114 1782 - 0.523008
sirA STY2155 response regulatorchromosome CDS2002473 657 - 0.512938
spoT STY4050 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; CG Site No. 156chromosome CDS3912117 2112 - 0.536458
sseB STY1722 putative pathogenicity island effector effector proteinchromosome CDS1642206 591 - 0.431472
ssrA STY1728 putative two-component sensor kinasechromosome CDS1647071 2763 + 0.420557
ssrB STY1729 putative two-component response regulatorchromosome CDS1649864 639 + 0.402191
stpA STY3001 tyrosine phosphatase (associated with virulence)chromosome CDS2874081 1632 - 0.436274
tar STY2128 methyl-accepting chemotaxis protein IIchromosome CDS1979723 1662 - 0.556558
tctD STY2904 transcriptional regulatorchromosome CDS2786824 675 - 0.548148
tctE STY2903 putative two-component system sensor kinasechromosome CDS2785422 1416 - 0.561441
torS STY3951 Two-component sensor protein histidine protein kinase.chromosome CDS3819535 2736 - 0.544225
ttrR STY1733 putative two-component response regulatorchromosome CDS1652946 621 - 0.553945
typA STY3871 GTP-binding proteinchromosome CDS3726120 1824 - 0.540022
uhpA STY3992 Two-component system response regulator proteinchromosome CDS3857652 591 + 0.590525
uhpB STY3993 two-component system sensor histidine kinasechromosome CDS3858242 1503 + 0.619428
umuD STY2206 UmuD proteinchromosome CDS2044752 420 - 0.5
uspA STY4212 universal stress protein Achromosome CDS4078877 435 - 0.510345
wzb STY2330 putative protein-tyrosine phosphatasechromosome CDS2159020 450 - 0.571111
yaeG STY0232 hypothetical proteinchromosome CDS243080 1158 + 0.544905
ybdQ STY0662 hypothetical proteinchromosome CDS662201 429 - 0.515152
ybeJ STY0710 ABC transporter periplasmic binding protein (glutamate/aspartate?)chromosome CDS705590 927 - 0.511327
ybeZ STY0715 PhoH-like ATP-binding proteinchromosome CDS709980 1086 - 0.538674
ybiI STY0862 hypothetical Zinc-finger containing proteinchromosome CDS854809 267 - 0.509363
yecG STY2136 hypothetical proteinchromosome CDS1987824 396 + 0.515152
yegE STY2336 hypothetical proteinchromosome CDS2166493 2991 + 0.541291
yehT STY2388 putative two-component system response regulatorchromosome CDS2219326 720 - 0.505556
yehU STY2389 putative two-component system sensor kinasechromosome CDS2220042 1686 - 0.527283
yfeA STY2651 hypothetical proteinchromosome CDS2487168 2190 - 0.509589
yfhA STY2809 putative transcriptional regulatorchromosome CDS2668161 1338 - 0.554559
yfiN STY2859 hypothetical proteinchromosome CDS2729376 1221 + 0.498771
ygaA STY2961 anaerobic nitric oxide reductase transcription regulatorchromosome CDS2836255 1521 - 0.594346
yhdA STY3555 putative lipoproteinchromosome CDS3398469 1941 - 0.535291
yhjB STY4197 hypothetical luxR-family transcriptional regulatorchromosome CDS4063347 603 + 0.477612
yhjH STY4192 hypothetical proteinchromosome CDS4056066 768 + 0.53125
yhjK STY4188 hypothetical proteinchromosome CDS4049730 1974 + 0.551165
yjcC STY4462 hypothetical proteinchromosome CDS4347506 1602 + 0.475031
ylaB STY0511 hypothetical 58.9 kDa protein in tesb-hha intergenic region. Contains probable N-terminal signal sequencechromosome CDS517438 1551 - 0.520954
yojN STY2494 putative two-component system sensor kinasechromosome CDS2324258 2670 + 0.515356