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2024-05-18 11:05:54

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Shigella flexneri 5 str. 8401, 8401

Number of genes found: 78

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SFV_1663 hypothetical proteinchromosome CDS1698797 867 + 0.499423
NA SFV_1576 putative enzymechromosome CDS1611693 759 + 0.545455
NA SFV_1206 hypothetical proteinchromosome CDS1250048 705 - 0.557447
NA SFV_4283 hypothetical proteinchromosome CDS4429130 897 + 0.522854
NA SFV_2136 hypothetical proteinchromosome CDS2167588 495 + 0.565657
NA SFV_3985 hypothetical proteinchromosome CDS4089067 297 + 0.508417
NA SFV_1602 hypothetical proteinchromosome CDS1632725 801 - 0.505618
NA SFV_1709 hypothetical proteinchromosome CDS1745116 411 - 0.508516
NA SFV_2490 hypothetical proteinchromosome CDS2544866 501 - 0.576846
NA SFV_1187 putative isomerasechromosome CDS1228463 660 + 0.516667
NA SFV_2020 unknown protein encoded within prophagechromosome CDS2054224 657 + 0.407915
NA SFV_1799 hypothetical proteinchromosome CDS1842502 1758 - 0.508532
NA SFV_2186 unknown protein encoded within prophagechromosome CDS2218637 657 + 0.407915
NA SFV_2056 hypothetical proteinchromosome CDS2078139 498 - 0.475904
NA SFV_1215 putative sensor-type regulatorchromosome CDS1260672 1842 + 0.513572
acpP SFV_1114 acyl carrier proteinchromosome CDS1157409 237 + 0.481013
acrA SFV_0436 acridine efflux pumpchromosome CDS458608 1230 - 0.534959
acrB SFV_0435 acridine efflux pumpchromosome CDS455436 3150 - 0.538095
acrD SFV_2514 Probable aminoglycoside efflux pumpchromosome CDS2571467 3114 + 0.542068
bioC SFV_0760 Biotin synthesis protein bioCchromosome CDS790327 756 + 0.562169
caiC SFV_0031 probable crotonobetaine/carnitine-CoA ligasechromosome CDS35274 1533 - 0.512068
dinF SFV_4169 DNA-damage-inducible protein Fchromosome CDS4303146 1380 - 0.555797
entA SFV_0544 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS575278 747 + 0.576975
entB SFV_0543 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS574421 858 + 0.552448
entD SFV_0528 enterochelin synthetase, component Dchromosome CDS555499 771 - 0.491569
entE SFV_0542 2,3-dihydroxybenzoate-AMP ligasechromosome CDS572797 1611 + 0.563004
entF SFV_0532 Enterobactin synthetase component Fchromosome CDS560197 3894 + 0.564458
fabF SFV_1115 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1157767 1206 + 0.531509
fabG SFV_1113 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1156464 735 + 0.514286
fadD SFV_1424 acyl-CoA synthetase, long-chain-fatty-acid--CoA ligasechromosome CDS1471047 1719 + 0.513089
hcaB SFV_2589 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2651755 813 + 0.562116
hpaG SFV_4384 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerasechromosome CDS4522894 1290 - 0.560465
hpaH SFV_4380 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS4519314 804 - 0.578358
iucA SFV_3854 siderophore biosynthesis proteinchromosome CDS3954511 1725 - 0.543768
iucC SFV_3852 siderophore biosynthesis proteinchromosome CDS3951821 1743 - 0.545611
iucD SFV_3851 lysine:N6-hydroxylasechromosome CDS3950487 1338 - 0.46562
kduD SFV_2920 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2989821 762 - 0.519685
mdlA SFV_0422 ATP-binding component of a transport systemchromosome CDS441615 1773 + 0.540891
menE SFV_2331 o-succinylbenzoate-CoA ligasechromosome CDS2380125 1356 - 0.562684
menF SFV_2336 isochorismate hydroxymutase 2chromosome CDS2385825 1296 - 0.534722
sorD SFV_4098 putative sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4224114 807 - 0.509294
srlD SFV_2800 glucitol (sorbitol)-6-phosphate dehydrogenasechromosome CDS2868509 780 - 0.530769
sufI SFV_3066 suppressor of ftsIchromosome CDS3130365 1413 - 0.564048
tauD SFV_0332 taurine dioxygenase, 2-oxoglutarate-dependentchromosome CDS350981 852 + 0.546948
tehB SFV_1776 tellurite resistancechromosome CDS1817124 594 - 0.459596
ucpA SFV_2479 putative oxidoreductasechromosome CDS2534838 792 - 0.54798
yacK SFV_0113 hypothetical proteinchromosome CDS135004 1551 + 0.545455
yadG SFV_0118 putative ATP-binding component of a transport systemchromosome CDS140620 852 + 0.491784
yafE SFV_0194 putative biotin synthesis proteinchromosome CDS223904 771 + 0.494163
yafS SFV_0197 hypothetical proteinchromosome CDS226941 723 + 0.495159
ybbO SFV_0466 putative oxidoreductasechromosome CDS492308 771 - 0.54345
ybdB SFV_0545 hypothetical proteinchromosome CDS576027 414 + 0.582126
ycaC SFV_0888 hypothetical proteinchromosome CDS930438 627 - 0.45614
yciK SFV_1283 putative oxidoreductasechromosome CDS1336569 759 - 0.525692
ydgB SFV_1621 putative oxidoreductasechromosome CDS1654721 723 + 0.50899
ydhE SFV_1685 putative transport proteinchromosome CDS1722590 1374 + 0.532751
ydjB SFV_1449 hypothetical proteinchromosome CDS1493291 642 - 0.534268
yebH SFV_1406 putative enzymechromosome CDS1453000 810 + 0.518519
yecO SFV_1906 hypothetical proteinchromosome CDS1951975 744 + 0.505376
yecP SFV_1907 putative enzymechromosome CDS1952715 972 + 0.520576
yegN SFV_2135 hypothetical proteinchromosome CDS2164960 2559 + 0.560375
yegO SFV_2137 hypothetical proteinchromosome CDS2168083 3066 + 0.57045
yeiN SFV_2240 hypothetical proteinchromosome CDS2273548 939 - 0.493078
yghA SFV_3055 putative oxidoreductasechromosome CDS3118811 885 + 0.545763
yhbL SFV_3239 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS3305630 654 - 0.527523
yhiH SFV_3487 Hypothetical ABC transporter ATP-binding protein yhiHchromosome CDS3551858 2736 - 0.566886
yhiQ SFV_3509 hypothetical proteinchromosome CDS3578629 753 - 0.590969
yiaV SFV_3948 hypothetical proteinchromosome CDS4051266 1137 + 0.506596
yibH SFV_3940 hypothetical proteinchromosome CDS4042254 1086 + 0.519337
yigI SFV_3678 hypothetical proteinchromosome CDS3765811 486 + 0.524691
yjcR SFV_4129 hypothetical proteinchromosome CDS4258152 972 + 0.567901
yjgI SFV_4245 putative oxidoreductasechromosome CDS4381646 714 + 0.537815
yojI SFV_2286 putative ATP-binding component of a transport systemchromosome CDS2322083 1644 - 0.534063
yrbC SFV_3222 hypothetical proteinchromosome CDS3293094 636 - 0.52044
yrbD SFV_3223 hypothetical proteinchromosome CDS3293748 552 - 0.498188
yrbE SFV_3224 hypothetical proteinchromosome CDS3294304 783 - 0.554278
yrbF SFV_3225 putative ATP-binding component of a transport systemchromosome CDS3295094 810 - 0.54321
ysgA SFV_3668 putative hydrolasechromosome CDS3754482 693 + 0.542569