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2024-05-18 08:23:50

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Shigella boydii Sb227, Sb227

Number of genes found: 70

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SBO_1869 putative sensor-type regulatorchromosome CDS1851863 1929 - 0.512701
NA SBO_1444 hypothetical proteinchromosome CDS1422663 411 + 0.508516
NA SBO_2463 hypothetical proteinchromosome CDS2453541 507 - 0.583826
NA SBO_1190 hypothetical proteinchromosome CDS1185518 288 + 0.510417
NA SBO_4241 hypothetical proteinchromosome CDS4296586 927 + 0.518878
NA SBO_0952 unknown protein encoded within prophagechromosome CDS983435 657 + 0.404871
NA SBO_3844 putative enzymechromosome CDS3868793 879 - 0.531286
NA SBO_1677 hypothetical proteinchromosome CDS1662978 1353 - 0.501109
NA SBO_1166 putative isomerasechromosome CDS1166249 660 + 0.518182
NA SBO_1428 putative IS1 encoded proteinchromosome CDS1404948 333 - 0.438438
acpP SBO_1969 acyl carrier proteinchromosome CDS1943482 237 - 0.481013
bioC SBO_0664 BioCchromosome CDS677544 756 + 0.564815
cchA SBO_2472 detox proteinchromosome CDS2460676 336 - 0.571429
cchB SBO_2471 detox proteinchromosome CDS2460282 288 - 0.53125
entA SBO_0457 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS477028 747 + 0.576975
entB SBO_0456 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS476171 858 + 0.551282
entC SBO_0454 isochorismate hydroxymutase 2, enterochelin biosynthesischromosome CDS473362 1176 + 0.561224
entD SBO_0443 enterochelin synthetase, component Dchromosome CDS457938 630 - 0.495238
entE SBO_0455 2,3-dihydroxybenzoate-AMP ligasechromosome CDS474547 1611 + 0.563625
entF SBO_0447 ATP-dependent serine activating enzymechromosome CDS462635 3882 + 0.562081
fabB SBO_2360 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2349335 1221 - 0.561835
fabF SBO_1968 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1942153 1242 - 0.532206
fabG SBO_1970 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1943929 735 - 0.514286
fadD SBO_1283 acyl-CoA synthetasechromosome CDS1271842 1686 + 0.511269
hcaA2 SBO_2563 small terminal subunit of phenylpropionate dioxygenasechromosome CDS2565598 519 + 0.520231
hcaB SBO_2565 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2566433 813 + 0.563346
hdhA SBO_1517 NAD-dependent 7alpha-hydroxysteroid dehydrogenasechromosome CDS1494183 768 + 0.47526
hpaB SBO_4404 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS4457553 1563 - 0.541267
hpaG SBO_4412 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerasechromosome CDS4466232 1290 - 0.556589
hpaH SBO_4408 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS4462765 651 - 0.582181
iucA SBO_4337 siderophore biosynthesis proteinchromosome CDS4386545 1782 + 0.537037
iucC SBO_4339 siderophore biosynthesis proteinchromosome CDS4389274 1743 + 0.545611
iucD SBO_4340 lysine:N6-hydroxylasechromosome CDS4391013 1338 + 0.466368
kduD SBO_2734 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2747547 762 - 0.520997
menE SBO_2297 o-succinylbenzoate-CoA ligasechromosome CDS2285818 1356 - 0.548673
menF SBO_2302 isochorismate hydroxymutase 2chromosome CDS2291518 1071 - 0.537815
smtA SBO_2209 S-adenosylmethionine-dependentmethyltransferasechromosome CDS2189492 786 + 0.516539
sorD SBO_4048 putative sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4091055 807 - 0.505576
srlD SBO_2813 glucitol (sorbitol)-6-phosphate dehydrogenasechromosome CDS2823329 780 - 0.525641
sufI SBO_2879 suppressor of ftsIchromosome CDS2882056 1413 - 0.564048
tauD SBO_0262 taurine dioxygenasechromosome CDS276087 852 + 0.543427
tehB SBO_1657 tellurite resistancechromosome CDS1639923 594 - 0.452862
ucpA SBO_2451 putative oxidoreductasechromosome CDS2442181 858 - 0.537296
yacK SBO_0112 hypothetical proteinchromosome CDS125437 1551 + 0.539007
yafE SBO_0199 putative biotin synthesis proteinchromosome CDS217880 624 + 0.496795
yafS SBO_0202 hypothetical proteinchromosome CDS220768 726 + 0.49449
ybbA SBO_0396 putative ATP-binding component of a transport systemchromosome CDS413554 687 + 0.56623
ybbO SBO_0395 putative oxidoreductasechromosome CDS412161 810 - 0.539506
ybcY SBO_1027 hypothetical proteinchromosome CDS1046279 432 - 0.405093
ybdB SBO_0458 hypothetical proteinchromosome CDS477777 414 + 0.582126
ycaC SBO_0986 hypothetical proteinchromosome CDS1008573 582 - 0.465636
yciK SBO_1795 putative oxidoreductasechromosome CDS1774591 759 + 0.523057
ydgB SBO_1530 putative oxidoreductasechromosome CDS1510504 723 - 0.51314
ydjB SBO_1319 hypothetical proteinchromosome CDS1303184 660 - 0.521212
yebH SBO_1235 putative enzymechromosome CDS1231468 810 - 0.518519
yecD SBO_1192 hypothetical proteinchromosome CDS1187232 336 + 0.520833
yecO SBO_1132 hypothetical proteinchromosome CDS1135566 744 - 0.502688
yecP SBO_1131 putative enzymechromosome CDS1134598 972 - 0.522634
yeiN SBO_2161 hypothetical proteinchromosome CDS2137924 891 - 0.501683
yghA SBO_2997 putative oxidoreductasechromosome CDS3000624 885 + 0.544633
yhbL SBO_3173 sigma cross-reacting protein 27Achromosome CDS3184669 663 + 0.524887
yhiQ SBO_3495 hypothetical proteinchromosome CDS3487340 753 - 0.586985
yigI SBO_3832 hypothetical proteinchromosome CDS3854364 480 - 0.522917
yjcS SBO_4115 hypothetical proteinchromosome CDS4160426 1998 - 0.51952
yjgI SBO_4198 putative oxidoreductasechromosome CDS4248347 714 + 0.543417
yohF SBO_1007 putative oxidoreductasechromosome CDS1025466 762 + 0.553806
yojI SBO_2096 putative ATP-binding component of a transport systemchromosome CDS2077005 1644 + 0.527981
yrbC SBO_3190 hypothetical proteinchromosome CDS3197246 636 + 0.525157
yrbD SBO_3189 hypothetical proteinchromosome CDS3196676 552 + 0.494565
yrbE SBO_3188 hypothetical proteinchromosome CDS3195889 783 + 0.551724