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2024-05-04 10:36:19

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism

Number of genes found: 2488

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Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP BU352 acyl carrier proteinchromosome CDS385670 243 + 0.234568
fabB BU092 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS94380 1221 + 0.314496
fabG BU351 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS384859 735 + 0.27619
yhiQ BU586 hypothetical proteinchromosome CDS618781 741 + 0.25776
 
Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP bbp322 acyl carrier proteinchromosome CDS373583 237 + 0.236287
bioC bbp270 biotin synthesis protein BioCchromosome CDS310714 744 - 0.263441
fabB bbp086 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS93527 1224 + 0.301471
fabG bbp321 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS372741 738 + 0.279133
 
Buchnera aphidicola str. Cc (Cinara cedri), Cc
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP BCc_218 AcpPchromosome CDS250714 243 + 0.139918
fabB BCc_056 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS61084 1224 + 0.257353
fabG BCc_217 3-oxoacyl-(acyl-carrier protein) reductasechromosome CDS249910 738 + 0.224932
mdlA BCc_297 ATP-binding component of a transport system, (ABC superfamily, subfamily B)chromosome CDS338177 1725 + 0.191304
mdlB BCc_298 ATP-binding component of a transport system, (ABC superfamily, subfamily C)chromosome CDS339933 1755 + 0.181766
 
Buchnera aphidicola str. Sg (Schizaphis graminum), Sg
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP BUsg340 acyl-carrier proteinchromosome CDS386789 240 + 0.1875
fabB BUsg084 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS94715 1224 + 0.292484
fabG BUsg339 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS385984 735 + 0.270748
yhiQ BUsg565 hypothetical 26.9 kDa proteinchromosome CDS619708 750 + 0.226667
 
Candidatus Blochmannia floridanus
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP Bfl403 acyl carrier proteinchromosome CDS444567 237 - 0.320675
fabB Bfl498 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS552834 1218 - 0.339901
fabG Bfl404 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS444940 735 - 0.317007
 
Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP BPEN_415 acyl carrier proteinchromosome CDS491600 252 - 0.333333
fabB BPEN_514 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS615721 1215 - 0.364609
fabG BPEN_416 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS491980 735 - 0.334694
 
Enterobacteria phage Fels-2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STM1638 putative SAM-dependent methyltransferasechromosome CDS1729115 438 + 0.484018
NA STM2178 putative 1,2-dioxygenasechromosome CDS2274349 1038 - 0.567437
NA STM0331 putative fumarylacetoacetate hydrolasechromosome CDS374837 879 + 0.498294
NA STM2011 putative cytoplasmic proteinchromosome CDS2092957 327 - 0.409786
NA STM0927 putative phage tail assembly proteinchromosome CDS1001442 576 + 0.472222
NA STM4506 putative dienelactone hydrolasechromosome CDS4760028 675 - 0.539259
NA STM1606 putative benzoate membrane transport proteinchromosome CDS1696306 1179 + 0.578456
NA STM1675 oxidoreductasechromosome CDS1768000 714 + 0.57423
NA STM0950 SlsAchromosome CDS1027679 678 - 0.538348
NA STM1366 hypothetical proteinchromosome CDS1449557 411 + 0.56691
NA STM2177 putative flutathione S-transferasechromosome CDS2273632 702 - 0.545584
acpP STM1196 acyl carrier proteinchromosome CDS1280113 237 + 0.476793
bioC STM0796 biotin biosynthetic proteinchromosome CDS862348 756 + 0.597884
caiC STM0071 crotonobetaine/carnitine-CoA ligasechromosome CDS82564 1554 - 0.507722
cueO STM0168 putative multicopper oxidasechromosome CDS196532 1611 + 0.564246
dlhH STM3967 putative dienelactone hydrolasechromosome CDS4173793 813 - 0.574416
entA STM0598 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS659921 756 + 0.585979
entB STM0597 2,3-dihydro-2,3-dihydroxybenzoate synthetasechromosome CDS659064 858 + 0.568765
entC STM0595 isochorismate synthasechromosome CDS656255 1176 + 0.582483
entD STM0584 enterochelin synthetase component Dchromosome CDS640808 705 - 0.558865
entE STM0596 2,3-dihydroxybenzoate-AMP ligasechromosome CDS657440 1611 + 0.574178
entF STM0588 enterobactin synthetase component Fchromosome CDS645462 3885 + 0.593822
eutK STM2455 putative carboxysome structural proteinchromosome CDS2565160 495 - 0.60202
eutM STM2465 putative detox proteinchromosome CDS2575212 291 - 0.604811
eutN STM2464 putative detox proteinchromosome CDS2574812 300 - 0.573333
fabB STM2378 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2488622 1215 - 0.573663
fabF STM1197 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1280435 1242 + 0.552335
fabG STM1195 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1279223 735 + 0.503401
fadD STM1818 acyl-CoA synthasechromosome CDS1915222 1686 - 0.523132
hpaB STM1099 4-hydroxyphenylacetate catabolismchromosome CDS1185726 1563 - 0.525912
hpaG STM1101 4-hydroxyphenylacetate catabolismchromosome CDS1188221 1290 + 0.563566
hpaH STM1105 4-hydroxyphenylacetate catabolismchromosome CDS1192359 804 + 0.590796
hutI STM0787 imidazolonepropionasechromosome CDS851841 1224 + 0.583333
iacP STM2881 acyl carrier proteinchromosome CDS3024412 249 - 0.37751
idnO STM4483 gluconate 5-dehydrogenasechromosome CDS4727174 765 - 0.535948
kduD STM3017 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3177574 762 - 0.518373
menE STM2305 O-succinylbenzoic acid--CoA ligasechromosome CDS2411673 1368 - 0.599415
menF STM2310 menaquinone-specific isochorismate synthasechromosome CDS2417382 1296 - 0.568673
nhoA STM1582 putative arylamine N-acetyltransferasechromosome CDS1668376 846 - 0.522459
pduA STM2038 polyhedral body proteinchromosome CDS2116846 285 + 0.536842
pduC STM2040 propanediol dehydratase large subunitchromosome CDS2117958 1665 + 0.568168
pduE STM2042 propanediol dehydratase small subunitchromosome CDS2120322 522 + 0.561303
pduJ STM2045 polyhedral body proteinchromosome CDS2123044 276 + 0.561594
pduK STM2046 polyhedral body proteinchromosome CDS2123323 483 + 0.559006
pduL STM2047 propanediol utilization proteinchromosome CDS2123805 633 + 0.601896
pduN STM2049 polyhedral body proteinchromosome CDS2124929 276 + 0.612319
pduT STM2054 polyhedral body proteinchromosome CDS2130094 555 + 0.583784
pduX STM2058 propanediol utilization proteinchromosome CDS2132712 903 + 0.55814
pncA STM1293 nicotinamidase/pyrazinamidasechromosome CDS1371115 657 - 0.575342
rrmA STM1835 23S rRNA m1G745 methyltransferasechromosome CDS1932707 810 - 0.561728
slsA STM3761 putative inner membrane proteinchromosome CDS3959839 681 + 0.522761
smtA STM0991 S-adenosylmethionine-dependentmethyltransferasechromosome CDS1077406 804 + 0.55597
srlD STM2835 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS2980225 780 + 0.547436
sufI STM3172 suppressor of ftsIchromosome CDS3334467 1413 - 0.589526
tehB STM1608 putative methyltransferasechromosome CDS1698362 597 - 0.499162
ucpA STM2445 short chain dehydrogenasechromosome CDS2556599 792 - 0.539141
yafE STM0259 putative methyltransferasechromosome CDS299097 771 + 0.525292
yafS STM0262 putative SAM-dependent methyltransferasechromosome CDS302152 723 + 0.507607
ybbA STM0507 putative transporterchromosome CDS566439 687 + 0.590975
ybbO STM0505 short chain dehydrogenasechromosome CDS564929 771 - 0.549935
ybbP STM0508 putative inner membrane proteinchromosome CDS567122 2415 + 0.585093
ybdB STM0599 hypothetical proteinchromosome CDS660679 414 + 0.601449
ycgM STM1812 putative fumarylacetoacetate hydrolasechromosome CDS1910959 660 - 0.531818
yciK STM1717 short chain dehydrogenasechromosome CDS1814369 762 + 0.568241
ydiD STM1350 hypothetical proteinchromosome CDS1430189 1641 - 0.533211
yecD STM1902 putative isochorismatasechromosome CDS1997208 567 + 0.559083
yecO STM1905 putative SAM-dependent methyltransferasechromosome CDS1999078 744 + 0.533602
yecP STM1906 putative enzymechromosome CDS1999818 972 + 0.552469
yghA STM3157 oxidoreductasechromosome CDS3318580 885 + 0.566102
yhbL STM3327 sigma cross-reacting protein 27Achromosome CDS3489612 654 - 0.577982
yhiQ STM3593 putative SAM-dependent methyltransferasechromosome CDS3763175 759 - 0.624506
yigI STM3956 hypothetical proteinchromosome CDS4160991 486 - 0.563786
yjhP STM4500 putative SAM-dependent methyltransferasechromosome CDS4753941 1632 - 0.54473
yohF STM2171 oxidoreductasechromosome CDS2268002 762 - 0.547244
yojI STM2263 putative ABC-type multidrug/protein/lipid transport system ATPase componentchromosome CDS2360762 1644 - 0.548662
yrbC STM3310 putative transport proteinchromosome CDS3476946 636 - 0.531447
yrbD STM3311 putative transport proteinchromosome CDS3477600 552 - 0.51087
yrbE STM3312 putative transport proteinchromosome CDS3478156 783 - 0.577267
yrbF STM3313 putative transport proteinchromosome CDS3478946 813 - 0.583026
 
Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECA0706 putative degenerate non-ribosomal peptide synthetase (partial)chromosome CDS774826 291 - 0.378007
NA ECA2071 putative cytochrome P450chromosome CDS2359589 1218 - 0.481938
NA ECA3662 putative cytochromechromosome CDS4111564 1389 - 0.520518
NA ECA3558 short chain dehydrogenasechromosome CDS3989266 747 + 0.54083
NA ECA1487 non-ribosomal peptide synthetasechromosome CDS1683593 21147 - 0.563059
NA ECA2366 fumarylacetoacetate hydrolase family proteinchromosome CDS2677067 657 - 0.519026
NA ECA1486 ABC transporter ATP-binding proteinchromosome CDS1681842 1665 - 0.500901
NA ECA1209 probable short chain dehydrogenasechromosome CDS1376426 888 + 0.552928
NA ECA1221 short chain dehydrogenasechromosome CDS1390635 771 - 0.577173
NA ECA0747 short chain dehydrogenasechromosome CDS818265 741 + 0.578947
NA ECA2383 putative isochorismatasechromosome CDS2694345 714 + 0.455182
NA ECA2511 hypothetical proteinchromosome CDS2828026 780 + 0.489744
NA ECA2215 putative short-chain dehydrogenasechromosome CDS2515094 708 - 0.556497
NA ECA1477 hypothetical proteinchromosome CDS1673638 267 - 0.479401
NA ECA2058 probable short-chain dehydrogenasechromosome CDS2343795 735 + 0.557823
NA ECA0054 hypothetical proteinchromosome CDS67694 747 - 0.580991
NA ECA1979 short chain dehydrogenasechromosome CDS2246565 834 + 0.533573
NA ECA0296 hypothetical proteinchromosome CDS343211 783 + 0.565773
NA ECA4494 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS5035063 1158 - 0.541451
NA ECA3127 acyl carrier proteinchromosome CDS3493259 222 - 0.504505
NA ECA4053 short chain dehydrogenasechromosome CDS4518864 780 + 0.544872
NA ECA2925 probable short chain dehydrogenasechromosome CDS3268214 759 + 0.561265
NA ECA0430 hypothetical proteinchromosome CDS490305 831 + 0.493381
NA ECA2289 short chain dehydrogenasechromosome CDS2595189 762 + 0.534121
NA ECA1224 hypothetical proteinchromosome CDS1392768 2430 + 0.579012
NA ECA1208 probable short chain dehydrogenasechromosome CDS1375437 882 + 0.555556
NA ECA2018 short chain dehydrogenasechromosome CDS2290679 723 - 0.536653
NA ECA3961 hypothetical proteinchromosome CDS4432620 636 + 0.487421
NA ECA0134 putative peptidasechromosome CDS154589 1083 - 0.633426
NA ECA4503 acyl carrier proteinchromosome CDS5044136 252 - 0.428571
NA ECA0295 ABC transporter, ATP-binding proteinchromosome CDS342391 813 + 0.544895
NA ECA2512 hypothetical proteinchromosome CDS2828802 984 + 0.538618
NA ECA1223 putative ABC transporter ATP-binding proteinchromosome CDS1392238 534 + 0.578652
NA ECA0482 putative non-ribosomal peptide synthetasechromosome CDS551412 6351 + 0.570934
NA ECA2704 short chain dehydrogenasechromosome CDS3039428 780 - 0.480769
NA ECA1857 hypothetical proteinchromosome CDS2111138 417 + 0.553957
NA ECA1544 putative methyltransferasechromosome CDS1797750 987 - 0.577508
NA ECA3214 probable short chain dehydrogenasechromosome CDS3596586 756 + 0.511905
NA ECA4504 putative acyl carrier proteinchromosome CDS5044405 267 - 0.426966
NA ECA4128 ABC transporter, ATP-binding proteinchromosome CDS4606330 693 - 0.5671
NA ECA3470 putative methyltransferasechromosome CDS3890504 771 + 0.560311
NA ECA3341 hypothetical proteinchromosome CDS3750235 711 - 0.47398
NA ECA2928 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS3270545 1290 - 0.56124
NA ECA2694 putative polyketide synthetasechromosome CDS3029319 1785 - 0.503081
NA ECA1767 Isochorismatase family proteinchromosome CDS2013994 585 + 0.473504
NA ECA1588 hypothetical proteinchromosome CDS1841727 384 + 0.486979
NA ECA4491 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS5032592 1227 - 0.552567
NA ECA4116 putative siderophore biosynthesis proteinchromosome CDS4588636 1902 - 0.536278
NA ECA3667 putative lipoproteinchromosome CDS4117795 330 + 0.430303
NA ECA1831 putative methyltransferasechromosome CDS2077218 765 + 0.535948
NA ECA2152 hypothetical proteinchromosome CDS2453948 795 - 0.49434
NA ECA3767 probable short-chain dehydrogenasechromosome CDS4207998 690 + 0.597101
NA ECA1738 hypothetical proteinchromosome CDS1984841 750 + 0.421333
NA ECA0483 putative non-ribosomal peptide synthetasechromosome CDS557759 2115 + 0.575887
NA ECA2575 putative fumarylacetoacetate hydrolasechromosome CDS2905173 885 - 0.497175
NA ECA0705 putative degenerate non-ribosomal peptide synthetase (partial)chromosome CDS774296 438 - 0.486301
NA ECA1101 putative ABC transporter ATP-binding proteinchromosome CDS1246646 1647 + 0.52459
NA ECA0184 putative carboxymethylenebutenolidasechromosome CDS206657 828 - 0.555556
NA ECA1488 non-ribosomal peptide synthetasechromosome CDS1704732 22572 - 0.572834
NA ECA0298 hypothetical proteinchromosome CDS344577 630 + 0.507937
NA ECA1586 probable short chain dehydrogenasechromosome CDS1840176 759 + 0.562582
NA ECA2639 putative hydantoinasechromosome CDS2967603 1569 - 0.499044
NA ECA4174 hypothetical proteinchromosome CDS4665267 489 + 0.543967
acpP ECA1798 acyl carrier proteinchromosome CDS2044934 237 + 0.434599
benE ECA4471 putative benzoate transport proteinchromosome CDS5014662 1200 - 0.558333
bioC ECA2823 biotin synthesis proteinchromosome CDS3163123 762 - 0.564304
budA ECA0740 alpha-acetolactate decarboxylasechromosome CDS808710 783 + 0.496807
budC ECA0310 acetoin reductasechromosome CDS354581 774 - 0.520672
cfa1 ECA0608 Cfa-acyl carrier proteinchromosome CDS679742 276 - 0.365942
cfa3 ECA0606 Cfa-beta-ketoacylsynthasechromosome CDS678109 1146 - 0.487784
cfa5 ECA0604 coronafacic acid synthetase, ligase componentchromosome CDS676143 1440 - 0.516667
cfa6 ECA0603 type I polyketide synthasechromosome CDS667988 8142 - 0.556006
cfa7 ECA0602 type I polyketide synthasechromosome CDS661605 6387 - 0.550023
cfa8A ECA0601 putative oxidoreductasechromosome CDS661110 432 - 0.439815
cfl ECA0609 coronafacate ligasechromosome CDS680119 1563 - 0.357646
dltA ECA3128 putative D-alanine--poly(phosphoribitol) ligase subunit 1chromosome CDS3493498 1434 - 0.532078
ehpB ECA2702 putative phenazine antibiotic biosynthesis proteinchromosome CDS3038223 621 - 0.428341
elbB ECA0316 enhancing lycopene biosynthesis protein 2 (sigma cross-reacting protein 27a)chromosome CDS366062 654 + 0.487768
entA ECA0481 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS550604 786 + 0.599237
entB ECA0479 enterobactin synthetase component B (isochorismatase)chromosome CDS546583 876 + 0.541096
entC ECA0477 isochorismate synthasechromosome CDS543754 1197 + 0.535505
entD ECA0474 enterobactin synthetase component D (4'-phosphopantetheinyl transferase)chromosome CDS539365 717 + 0.53417
entE ECA0478 enterobactin synthetase component E [includes: 2,3-dihydroxybenzoate-AMP ligase; S-dihydroxybenzoyltransferase]chromosome CDS544947 1626 + 0.575031
entF ECA0480 enterobactin synthetase component Fchromosome CDS547455 3144 + 0.576972
expI ECA0105 N-acylhomoserine lactone synthesis proteinchromosome CDS125689 651 + 0.37788
fabB ECA3063 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS3420405 1218 - 0.529557
fabF ECA1799 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2045253 1242 + 0.529791
fabG ECA4492 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS5033818 732 - 0.516393
fabG ECA1797 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS2044045 735 + 0.487075
fadD ECA2372 acyl-CoA synthasechromosome CDS2681736 1686 - 0.514828
kduD ECA2401 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2712101 762 + 0.507874
menE ECA1215 O-succinylbenzoic acid--CoA ligasechromosome CDS1383651 1431 + 0.575122
menF ECA1210 menaquinone-specific isochorismate synthasechromosome CDS1377747 1323 + 0.5548
nahO ECA1428 acetaldehyde dehydrogenasechromosome CDS1621487 891 + 0.45679
padC ECA0069 phenolic acid decarboxylasechromosome CDS83450 510 + 0.482353
pncA ECA2341 pyrazinamidase/nicotinamidase [includes: pyrazinamidase nicotinamidase]chromosome CDS2652833 648 + 0.509259
prtW ECA2785 metalloproteasechromosome CDS3123040 1410 - 0.490071
pvcA ECA3381 pyoverdine biosynthesis proteinchromosome CDS3797644 981 - 0.46789
pvcB ECA3380 pyoverdine biosynthesis proteinchromosome CDS3796722 933 - 0.500536
rrmA ECA2390 ribosomal RNA large subunit methyltransferase Achromosome CDS2701800 831 - 0.523466
smtA ECA2550 putative S-adenosylmethionine-dependent methyltransferasechromosome CDS2878626 786 - 0.515267
sufI ECA0347 putative cell division proteinchromosome CDS395766 1416 + 0.558616
tehB ECA0900 putative tellurite resistance proteinchromosome CDS1003036 861 - 0.495935
vpsC ECA0297 hypothetical proteinchromosome CDS343998 567 + 0.511464
 
Escherichia coli 536, 536
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECP_3613 hypothetical integral membrane protein YhiVchromosome CDS3774817 3114 + 0.530186
NA ECP_2665 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS2804620 780 + 0.533333
NA ECP_4325 hypothetical protein YjcSchromosome CDS4537337 1986 - 0.519637
NA ECP_4014 hypothetical protein YigI (putative thioesterase)chromosome CDS4188764 468 - 0.532051
NA ECP_4554 alpha-hemolysin translocation ATP-binding protein HlyBchromosome CDS4761436 2124 - 0.403484
NA ECP_2362 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2472218 1221 - 0.561835
NA ECP_2115 multidrug transporterchromosome CDS2192382 3123 + 0.565482
NA ECP_2309 menaquinone-specific isochorismate synthasechromosome CDS2416158 1296 - 0.530864
NA ECP_1085 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS1141549 735 + 0.515646
NA ECP_3085 predicted hydrolasechromosome CDS3248724 891 - 0.52413
NA ECP_3579 hypothetical protein YhiI precursorchromosome CDS3742866 1068 - 0.581461
NA ECP_3062 putative acyl carrier proteinchromosome CDS3227972 228 + 0.412281
NA ECP_2449 pxidoreductase UcpAchromosome CDS2564665 792 - 0.551768
NA ECP_1550 hypothetical oxidoreductase YdgBchromosome CDS1600408 723 + 0.514523
NA ECP_1716 pyrazinamidase/nicotinamidasechromosome CDS1769295 642 + 0.531153
NA ECP_4338 HisM-like integral membrane protein PhnMchromosome CDS4548688 1137 - 0.604222
NA ECP_4238 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4443695 807 - 0.51425
NA ECP_1465 N-hydroxyarylamine O-acetyltransferasechromosome CDS1505549 846 + 0.503546
NA ECP_0629 hypothetical protein YbdBchromosome CDS665242 414 + 0.584541
NA ECP_0614 enterobactin synthetase component Dchromosome CDS645579 630 - 0.484127
NA ECP_2304 O-succinylbenzoic acid-CoA ligasechromosome CDS2410458 1356 - 0.569322
NA ECP_1391 multidrug resistance protein Achromosome CDS1422545 1029 + 0.462585
NA ECP_0216 probable methyltransferase YafEchromosome CDS236068 771 + 0.491569
NA ECP_3587 hypothetical protein YhiQchromosome CDS3751796 795 - 0.586164
NA ECP_1966 putative polyketide synthasechromosome CDS2019781 2460 - 0.521138
NA ECP_0510 multidrug resistance-like ATP-binding protein MdlBchromosome CDS537876 1782 + 0.559484
NA ECP_0900 transport ATP-binding protein CydCchromosome CDS941266 1722 - 0.535424
NA ECP_3106 suppressor of FtsIchromosome CDS3270579 1413 - 0.564756
NA ECP_1946 yersiniabactin siderophore biosynthetic protein YbtEchromosome CDS1997874 1578 + 0.588086
NA ECP_4458 putative oxoacyl reductasechromosome CDS4665022 792 - 0.52904
NA ECP_0037 probable crotonobetaine/carnitine-CoA ligasechromosome CDS37825 1569 - 0.50733
NA ECP_1223 putative fumarylacetoacetate (FAA) hydrolase familychromosome CDS1249261 660 + 0.527273
NA ECP_4039 putative carboxymethylenebutenolidasechromosome CDS4215764 810 - 0.541975
NA ECP_0901 transport ATP-binding protein CydDchromosome CDS942988 1767 - 0.531975
NA ECP_1960 hypothetical protein YeeOchromosome CDS2013616 1488 + 0.495296
NA ECP_4038 hypothetical isochorismatase family protein YcdLchromosome CDS4214839 669 - 0.499253
NA ECP_0626 2,3-dihydroxybenzoate-AMP ligasechromosome CDS662012 1611 + 0.565487
NA ECP_0809 hypothetical membrane protein YbhGchromosome CDS844853 996 - 0.580321
NA ECP_3279 hypothetical protein YrbC (putative toluene tolerance protein)chromosome CDS3447564 636 - 0.522013
NA ECP_1964 putative thioesterasechromosome CDS2017539 723 - 0.460581
NA ECP_0627 Isochorismatasechromosome CDS663636 858 + 0.554779
NA ECP_1249 glycerol metabolism operon regulatory proteinchromosome CDS1277435 1920 + 0.514583
NA ECP_1563 7-alpha-hydroxysteroid dehydrogenasechromosome CDS1616531 768 - 0.471354
NA ECP_1241 hypothetical proteinchromosome CDS1268132 813 - 0.549815
NA ECP_2747 hypothetical oxidoreductase YgcWchromosome CDS2884969 786 - 0.455471
NA ECP_3827 hemolysin Achromosome CDS3993570 3075 + 0.413333
NA ECP_2393 multidrug resistance protein Kchromosome CDS2505611 1041 - 0.424592
NA ECP_1967 non-ribosomal peptide synthetasechromosome CDS2022271 4368 - 0.538004
NA ECP_1976 putative D-alanyl carrier proteinchromosome CDS2052936 249 - 0.39759
NA ECP_4262 DNA-damage-inducible protein Fchromosome CDS4469569 1380 + 0.548551
NA ECP_1814 protein YecOchromosome CDS1864430 744 + 0.504032
NA ECP_4553 hemolysin Dchromosome CDS4759981 1437 - 0.392484
NA ECP_0605 putative copper efflux system protein CusB precursorchromosome CDS634873 1224 + 0.560458
NA ECP_3829 hemolysin Dchromosome CDS3998857 1437 + 0.392484
NA ECP_1590 hypothetical proteinchromosome CDS1640625 858 + 0.505827
NA ECP_4555 hemolysin Achromosome CDS4763630 3075 - 0.416911
NA ECP_4323 putative HlyD family secretion protein YjcRchromosome CDS4535803 1032 - 0.561047
NA ECP_0219 hypothetical protein YafSchromosome CDS239103 726 + 0.49449
NA ECP_1972 probable polyketide synthase proteinchromosome CDS2042611 3033 - 0.569073
NA ECP_0559 hypothetical oxidoreductase YbbOchromosome CDS588204 771 - 0.547341
NA ECP_0911 hypothetical protein YcaCchromosome CDS958714 627 - 0.46571
NA ECP_4515 gluconate 5-dehydrogenasechromosome CDS4731325 765 - 0.494118
NA ECP_0932 S-adenosylmethionine-dependent methltransferasechromosome CDS984095 786 + 0.516539
NA ECP_3695 hypothetical protein YibHchromosome CDS3871559 1137 - 0.533861
NA ECP_0523 acriflavine resistance protein Bchromosome CDS548496 3150 - 0.534286
NA ECP_1345 multidrug efflux proteinchromosome CDS1376444 3108 + 0.519305
NA ECP_2577 hypothetical protein YfiCchromosome CDS2717437 738 - 0.52168
NA ECP_3578 hypothetical ABC transporter ATP-binding protein YhiHchromosome CDS3740134 2736 - 0.56652
NA ECP_1436 putative benzoate membrane transport proteinchromosome CDS1479245 1266 - 0.527646
NA ECP_1086 acyl carrier proteinchromosome CDS1142494 237 + 0.481013
NA ECP_1943 yersiniabactin biosynthetic proteinchromosome CDS1986482 9492 + 0.606405
NA ECP_0893 macrolide-specific efflux protein MacA precursorchromosome CDS932968 1116 + 0.533154
NA ECP_1415 hypothetical protein YnbCchromosome CDS1455231 1758 + 0.515358
NA ECP_0305 putative ATP binding cassette (ABC) transporterchromosome CDS324717 3738 - 0.578919
NA ECP_2176 hypothetical oxidoreductase YohFchromosome CDS2267357 762 - 0.548556
NA ECP_1811 hypothetical isochorismatase family protein YecDchromosome CDS1862560 567 + 0.530864
NA ECP_1939 inner membrane ABC-transporter YbtQchromosome CDS1975379 1803 - 0.584581
NA ECP_0808 hypothetical ABC transporter ATP-binding protein YbhFchromosome CDS843124 1737 - 0.557283
NA ECP_2254 hypothetical ABC transporterchromosome CDS2344656 984 - 0.533537
NA ECP_1087 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1142817 1242 + 0.533816
NA ECP_1979 putative polyketide synthasechromosome CDS2056734 9621 - 0.533417
NA ECP_0791 biotin synthesis protein BioCchromosome CDS827554 756 + 0.56746
NA ECP_3828 alpha-hemolysin translocation ATP-binding protein HlyBchromosome CDS3996715 2124 + 0.403484
NA ECP_1815 hypothetical protein YecPchromosome CDS1865170 972 + 0.52572
NA ECP_1344 putative multidrug-efflux transport proteinchromosome CDS1375323 1122 + 0.510695
NA ECP_0130 blue copper oxidase CueO precursorchromosome CDS142145 1551 + 0.540941
NA ECP_1971 putative non-ribosomal peptide synthasechromosome CDS2036067 6501 - 0.561144
NA ECP_2114 hypothetical protein YegM precursorchromosome CDS2191135 1248 + 0.546474
NA ECP_1748 long-chain-fatty-acid-CoA ligasechromosome CDS1799911 1719 - 0.511344
NA ECP_1973 probable peptide synthetase proteinchromosome CDS2045693 4797 - 0.553888
NA ECP_2253 hypothetical ABC transporterchromosome CDS2343996 657 - 0.52968
NA ECP_1320 hypothetical oxidoreductase YciKchromosome CDS1351462 759 - 0.524374
NA ECP_3297 eNhancing lycopene biosynthesis protein 2chromosome CDS3460113 654 - 0.522936
NA ECP_1944 yersiniabactin biosynthetic protein YbtUchromosome CDS1995970 1101 + 0.604905
NA ECP_2855 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3013153 762 - 0.519685
NA ECP_1633 hypothetical proteinchromosome CDS1680183 411 - 0.508516
NA ECP_1010 hypothetical isochorismatase family protein YcdLchromosome CDS1066585 693 - 0.551227
NA ECP_1765 ribosomal RNA large subunit methyltransferase Achromosome CDS1818101 810 - 0.511111
NA ECP_1945 yersiniabactin biosynthetic protein YbtTchromosome CDS1997082 789 + 0.586819
NA ECP_3281 hypothetical proteinchromosome CDS3448774 783 - 0.54917
NA ECP_2205 hypothetical protein YeiNchromosome CDS2298242 939 - 0.467519
NA ECP_2468 ethanolamine utilization protein EutNchromosome CDS2583665 288 - 0.534722
NA ECP_1648 hypothetical protein YdiDchromosome CDS1697764 1701 + 0.502058
NA ECP_0431 alpha-ketoglutarate-dependent taurine dioxygenasechromosome CDS456513 852 + 0.543427
NA ECP_3280 hypothetical protein YrbD precursorchromosome CDS3448218 552 - 0.494565
NA ECP_1940 putative inner membrane ABC-transporter (YbtP)chromosome CDS1977168 1713 - 0.579101
NA ECP_1970 putative non-ribosomal peptide synthasechromosome CDS2029592 6465 - 0.563496
NA ECP_1978 putative polyketide synthasechromosome CDS2054093 2601 - 0.551326
 
Escherichia coli APEC O1, APEC O1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA APECO1_3423 putative hydrolasechromosome CDS3430586 927 - 0.523193
NA APECO1_2631 putative dienelactone hydrolasechromosome CDS4328249 876 - 0.527397
NA APECO1_1055 putative ABC transporter proteinchromosome CDS2094855 1830 - 0.58306
NA APECO1_3445 putative saframycin Mx1 synthetase Bchromosome CDS3407083 1725 + 0.525217
NA APECO1_1452 hypothetical proteinchromosome CDS614819 414 + 0.584541
NA APECO1_2182 hypothetical proteinchromosome CDS4842938 897 - 0.512821
NA APECO1_2283 putative propanediol utilization proteinchromosome CDS4740855 687 - 0.563319
NA APECO1_310 hypothetical proteinchromosome CDS1258821 813 - 0.549815
NA APECO1_2632 putative isochorismatase hydrolasechromosome CDS4327324 669 - 0.502242
NA APECO1_2448 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4553163 807 - 0.513011
NA APECO1_2303 hypothetical proteinchromosome CDS4722436 642 - 0.524922
NA APECO1_318 glycerol metabolism operon regulatory proteinchromosome CDS1268114 1929 + 0.514256
NA APECO1_102 hypothetical proteinchromosome CDS1058060 735 - 0.563265
aas APECO1_3670 bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-acyl carrier protein synthetasechromosome CDS3181387 2160 - 0.522222
acrA APECO1_1551 acriflavine resistance protein A precursorchromosome CDS500155 1194 - 0.536851
acrF APECO1_3173 acriflavine resistance protein Fchromosome CDS3705903 3105 + 0.510467
bioC APECO1_1312 biotin synthesis protein BioCchromosome CDS776181 795 + 0.56478
caiC APECO1_1944 crotonobetaine/carnitine-CoA ligasechromosome CDS38887 1569 - 0.507967
cchB APECO1_4101 putative carboxysome structural protein, ethanolamine utilizationchromosome CDS2693944 288 - 0.538194
ccmA APECO1_4358 heme exporter protein Achromosome CDS2406591 624 - 0.554487
cueO APECO1_1862 multicopper oxidase (laccase)chromosome CDS143245 1551 + 0.539652
cusB APECO1_1474 copper/silver efflux system, membrane fusion proteinchromosome CDS584531 1224 + 0.558007
cydD APECO1_1202 Transport ATP-binding proteinchromosome CDS900999 1767 - 0.532541
emrK APECO1_4168 EmrKY-TolC multidrug resistance efflux pump, membrane fusion proteinchromosome CDS2615981 1056 - 0.422348
entA APECO1_1453 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS614040 777 + 0.570142
entB APECO1_1454 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS613213 858 + 0.548951
entC APECO1_1456 isochorismate synthasechromosome CDS610392 1188 + 0.558081
entD APECO1_1466 4'-phosphopantetheinyl transferase EntDchromosome CDS595164 771 - 0.485084
entE APECO1_1455 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complexchromosome CDS611589 1611 + 0.564867
entF APECO1_1463 enterobactin synthase multienzyme complex component, ATP-dependentchromosome CDS599724 4020 + 0.565423
eutM APECO1_4100 putative detox protein in ethanolamine utilizationchromosome CDS2694338 336 - 0.568452
eutN APECO1_2286 ethanolamine utilization protein EutNchromosome CDS4739052 270 - 0.533333
fabB APECO1_4241 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2545488 1221 - 0.561016
fabF APECO1_176 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1134290 1242 + 0.533816
fabG APECO1_174 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1133022 735 + 0.515646
fadD APECO1_863 long chain fatty acid CoA-ligasechromosome CDS1895975 1752 - 0.509132
hdhA APECO1_702 7-alpha-hydroxysteroid dehydrogenasechromosome CDS1718757 768 - 0.471354
hlyD APECO1_490 putative secretion proteinchromosome CDS1458313 1032 + 0.463178
ibeR APECO1_2094 putative regulatory protein IbeRchromosome CDS4951124 1950 + 0.39641
idnO APECO1_2128 gluconate 5-dehydrogenasechromosome CDS4909242 765 - 0.49281
irp1 APECO1_1059 yersiniabactin biosynthetic proteinchromosome CDS2105958 9162 + 0.606745
irp2 APECO1_1058 yersiniabactin biosynthetic proteinchromosome CDS2099745 6126 + 0.600718
kduD APECO1_3664 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3190030 762 - 0.51706
macA APECO1_1216 macrolide-specific efflux protein MacA precursorchromosome CDS881621 1116 + 0.533154
mdlB APECO1_1562 multidrug resistance-like ATP-binding protein MdlBchromosome CDS486250 1896 + 0.560127
mdtF APECO1_2934 putative multidrug transporter MdtF, RpoS-dependentchromosome CDS3959988 3114 + 0.530507
menE APECO1_4301 O-succinylbenzoic acid--CoA ligasechromosome CDS2482358 1356 - 0.565634
menF APECO1_4296 menaquinone-specific isochorismate synthasechromosome CDS2488058 1296 - 0.532407
nhoA APECO1_600 N-hydroxyarylamine O-acetyltransferasechromosome CDS1591655 846 + 0.503546
phnM APECO1_2355 PhnM, carbon-phosphorus lyase complex subunitchromosome CDS4662629 1137 - 0.597186
rbbA APECO1_2964 fused ribosome-associated ATPase: ATP-binding protein, predicted membrane proteinchromosome CDS3925306 2736 - 0.563596
smtA APECO1_33 SmtAchromosome CDS976997 798 + 0.516291
srlD APECO1_3821 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS3001296 780 + 0.532051
sufI APECO1_3402 repressor protein for FtsIchromosome CDS3452441 1413 - 0.558386
tam APECO1_639 putative trans-aconitate 2-methyltransferasechromosome CDS1645803 759 + 0.545455
tehB APECO1_576 Tellurite resistance protein TehBchromosome CDS1563751 594 + 0.46633
ucpA APECO1_4120 oxidoreductase UcpAchromosome CDS2675044 792 - 0.551768
yafE APECO1_1780 hypothetical proteinchromosome CDS236726 771 + 0.491569
yafS APECO1_1777 putative S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS239744 741 + 0.497976
ybcY APECO1_1483 conserved hypothetical protein YbcY precursorchromosome CDS571757 666 - 0.40991
ybhF APECO1_1296 putative ABC-type transport protein YbhFchromosome CDS791790 1752 - 0.557648
ybhG APECO1_1295 conserved hypothetical membrane protein ybhGchromosome CDS793519 999 - 0.577578
ybtE APECO1_1062 yersiniabactin siderophore biosynthetic proteinchromosome CDS2117348 1578 + 0.588086
ybtP APECO1_1056 putative inner membrane ABC-transporterchromosome CDS2096644 1803 - 0.571825
ybtT APECO1_1061 yersiniabactin biosynthetic protein YbtTchromosome CDS2116541 804 + 0.587065
ycaC APECO1_1192 hypothetical proteinchromosome CDS916788 726 - 0.464187
ycgM APECO1_293 putative isomerasechromosome CDS1239936 660 + 0.525758
yciK APECO1_431 hypothetical oxidoreductase YciKchromosome CDS1387215 759 - 0.523057
ydgB APECO1_689 putative oxidoreductasechromosome CDS1702634 723 + 0.50899
ydhJ APECO1_726 hypothetical proteinchromosome CDS1742644 744 + 0.495968
ydiD APECO1_777 short chain acyl-CoA synthetase, anaerobicchromosome CDS1799791 1701 + 0.50147
ydiI APECO1_763 hypothetical proteinchromosome CDS1782209 411 - 0.506083
ydjB APECO1_837 pyrazinamidase/nicotinamidasechromosome CDS1865342 660 + 0.527273
yebH APECO1_879 ribosomal RNA large subunit methyltransferase Achromosome CDS1914165 810 - 0.511111
yecD APECO1_917 hypothetical proteinchromosome CDS1958692 567 + 0.536155
yecO APECO1_920 hypothetical proteinchromosome CDS1960562 744 + 0.5
yecP APECO1_921 hypothetical proteinchromosome CDS1961302 972 + 0.526749
yeeO APECO1_6020 hypothetical proteinchromosome CDS2130624 1491 - 0.492958
yegM APECO1_1164 hypothetical proteinchromosome CDS2240755 1395 + 0.53405
yegO APECO1_1166 hypothetical proteinchromosome CDS2245272 3078 + 0.562378
yeiN APECO1_4389 hypothetical proteinchromosome CDS2370135 939 - 0.468584
ygcW APECO1_3759 putative oxidoreductase YgcWchromosome CDS3066758 861 - 0.45993
yghA APECO1_3420 putative oxidoreductase YghAchromosome CDS3433392 888 + 0.539414
yhiI APECO1_2963 hypothetical proteinchromosome CDS3928038 1068 - 0.582397
yhiQ APECO1_2956 hypothetical proteinchromosome CDS3936968 858 - 0.590909
yibH APECO1_2860 hypothetical proteinchromosome CDS4058741 1137 - 0.531223
yigI APECO1_2656 hypothetical proteinchromosome CDS4301248 486 - 0.520576
yjcR APECO1_2369 putative membrane fusion protein of efflux pumpchromosome CDS4649743 1032 - 0.561047
yjcS APECO1_2367 hypothetical proteinchromosome CDS4651276 1998 - 0.524525
yohF APECO1_4412 putative oxidoreductasechromosome CDS2340476 762 - 0.551181
yojI APECO1_4348 putative ABC transporter ATP-binding protein YojIchromosome CDS2415977 1644 - 0.526156
yrbD APECO1_3242 putative ABC-type organic solvent transporterchromosome CDS3630500 552 - 0.492754
yrbE APECO1_3241 putative toluene transporter subunit: permease componentchromosome CDS3631056 783 - 0.550447
 
Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA c4532 hypothetical proteinchromosome CDS4311760 252 + 0.492063
NA c2427 Putative peptide/polyketide synthetase proteinchromosome CDS2234022 2196 + 0.606102
NA c3712 acyl-CoA synthasechromosome CDS3545212 1731 + 0.528018
NA c2429 hypothetical proteinchromosome CDS2238812 4710 + 0.602548
NA c1189 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1146145 1179 - 0.603053
NA c2454 hypothetical proteinchromosome CDS2269816 1116 - 0.552867
NA c4771 Putative carboxymethylenebutenolidasechromosome CDS4535659 876 - 0.52968
NA c2428 hypothetical proteinchromosome CDS2236117 2898 + 0.613872
NA c0321 gluconate 5-dehydrogenasechromosome CDS291188 801 + 0.380774
NA c1628 Protein ycgMchromosome CDS1466093 660 + 0.527273
NA c2432 Putative thioesterasechromosome CDS2244762 657 + 0.579909
NA c1199 acyl carrier proteinchromosome CDS1155160 252 - 0.480159
NA c3714 hypothetical proteinchromosome CDS3547885 249 + 0.405622
NA c4769 hypothetical proteinchromosome CDS4534734 600 - 0.505
NA c2670 hypothetical proteinchromosome CDS2518639 309 - 0.540453
NA c2461 hypothetical proteinchromosome CDS2293239 4812 - 0.5532
NA c1203 Putative O-methyltransferasechromosome CDS1157236 1059 - 0.458924
NA c4986 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4763989 807 - 0.51425
NA c2469 Putative polyketide synthasechromosome CDS2304280 4059 - 0.558266
NA c1474 Hypothetical protein ybcY precursorchromosome CDS1371829 666 - 0.414414
NA c1186 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1143727 1230 - 0.552846
NA c2470 Putative peptide/polyketide synthasechromosome CDS2308283 5628 - 0.515814
NA c3736 Putative enzymechromosome CDS3568730 927 - 0.522114
NA c2453 Putative polyketide synthasechromosome CDS2267326 2460 - 0.521138
NA c2466 hypothetical proteinchromosome CDS2300482 249 - 0.39759
NA c1200 Putative acyl carrier proteinchromosome CDS1155423 258 - 0.492248
NA c2460 Putative polyketide synthasechromosome CDS2290157 3033 - 0.569073
NA c2434 Putative salicyl-AMP ligasechromosome CDS2246714 285 + 0.582456
NA c1659 Glycerol metabolism operon Regulatory proteinchromosome CDS1494264 1929 + 0.516848
NA c2455 Putative peptide synthetasechromosome CDS2270909 3363 - 0.535236
NA c4548 hypothetical proteinchromosome CDS4325744 642 + 0.52648
NA c2433 2,3-dihydroxybenzoate-AMP ligasechromosome CDS2245422 1248 + 0.590545
NA c0137 hypothetical proteinchromosome CDS130380 291 + 0.38488
NA c2468 Putative polyketide synthasechromosome CDS2301639 2610 - 0.550192
NA c0289 hypothetical proteinchromosome CDS269022 357 - 0.565826
NA c2451 Putative thioesterasechromosome CDS2265084 723 - 0.460581
NA c2459 Putative peptide synthetasechromosome CDS2283613 6501 - 0.561144
NA c1648 hypothetical proteinchromosome CDS1484977 708 - 0.560734
NA c2430 hypothetical proteinchromosome CDS2243518 1101 + 0.604905
NA c0651 Hypothetical protein ybcY precursorchromosome CDS628200 666 - 0.412913
NA c4525 Putative chormophorylate of CpcAchromosome CDS4307287 687 + 0.564774
NA c2972 Ethanolamine utilization protein eutK precursorchromosome CDS2832776 507 - 0.579882
NA c4528 Ethanolamine utilization protein eutNchromosome CDS4309507 270 + 0.537037
NA c2424 Putative peptide synthetasechromosome CDS2227110 4269 + 0.600141
NA c2669 hypothetical proteinchromosome CDS2518186 387 - 0.565891
NA c2426 Putative peptide synthetasechromosome CDS2231817 2130 + 0.5723
NA c2458 Putative peptide synthetasechromosome CDS2277138 6465 - 0.56365
acpP c1364 acyl carrier proteinchromosome CDS1295117 237 + 0.481013
bioC c0857 Biotin synthesis protein bioCchromosome CDS834258 795 + 0.557233
caiC c0046 crotonobetaine/carnitine-CoA ligasechromosome CDS38930 1569 - 0.507967
cchA c2982 Ethanolamine utilization protein eutM precursorchromosome CDS2842915 336 - 0.568452
cchB c2981 Ethanolamine utilization protein eutNchromosome CDS2842521 288 - 0.538194
entA c0683 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS670624 747 + 0.570281
entB c0682 Isochorismatasechromosome CDS669767 858 + 0.550117
entC c0680 isochorismate synthasechromosome CDS666946 1188 + 0.554714
entD c0668 4'-phosphopantetheinyl transferase entDchromosome CDS651687 771 - 0.478599
entE c0681 2,3-dihydroxybenzoate-AMP ligasechromosome CDS668143 1611 + 0.564867
entF c0673 Enterobactin synthetase component Fchromosome CDS656385 3882 + 0.559505
fabB c2869 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2722183 1221 - 0.561835
fabF c1365 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1295440 1242 + 0.534622
fabG c5303 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS5043561 792 - 0.534091
fabG c1187 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1144953 732 - 0.56694
fadD c2209 acyl-CoA synthasechromosome CDS2039733 1752 - 0.510274
hdhA c2011 7-alpha-hydroxysteroid dehydrogenasechromosome CDS1857794 768 - 0.472656
idnO c5367 gluconate 5-dehydrogenasechromosome CDS5111524 765 - 0.495425
iucA c3627 IucA proteinchromosome CDS3467418 1788 - 0.535794
iucC c3625 IucC proteinchromosome CDS3464728 1743 - 0.547332
iucD c3624 IucD proteinchromosome CDS3463394 1338 - 0.464126
kduD c3439 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3290530 762 - 0.524934
menE c2803 O-succinylbenzoic acid--CoA ligasechromosome CDS2660030 1356 - 0.564159
menF c2809 menaquinone-specific isochorismate synthasechromosome CDS2665730 1296 - 0.532407
nhoA c1895 N-hydroxyarylamine O-acetyltransferasechromosome CDS1728791 846 + 0.503546
smtA c1063 Protein smtAchromosome CDS1024485 798 + 0.517544
srlD c3259 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS3110206 780 + 0.534615
sufI c3757 Protein sufI precursorchromosome CDS3590586 1413 - 0.559094
tauD c0476 Alpha-ketoglutarate-dependent taurine dioxygenasechromosome CDS463087 852 + 0.543427
tehB c1854 Tellurite resistance protein tehBchromosome CDS1694048 594 + 0.468013
ucpA c2960 short chain dehydrogenasechromosome CDS2823621 948 - 0.528481
yacK c0152 Blue copper oxidase cueO precursorchromosome CDS147373 1590 + 0.53522
yafE c0247 Hypothetical protein yafEchromosome CDS243401 771 + 0.490272
yafS c0250 Hypothetical protein yafSchromosome CDS246421 741 + 0.493927
ybbA c0616 Hypothetical ABC transporter ATP-binding protein ybbAchromosome CDS595694 687 + 0.557496
ybbO c0614 short chain dehydrogenasechromosome CDS594301 810 - 0.540741
ybbP c0617 Hypothetical protein ybbPchromosome CDS596377 2415 + 0.583437
ybdB c0684 Hypothetical protein ybdBchromosome CDS671373 414 + 0.584541
ycaC c1034 Protein ycaCchromosome CDS999114 726 - 0.464187
ycdL c1148 Hypothetical isochorismatase family protein ycdLchromosome CDS1105666 735 - 0.559184
yciK c1736 short chain dehydrogenasechromosome CDS1571954 759 - 0.524374
ydcO c1857 Hypothetical protein ydcOchromosome CDS1695647 1296 - 0.524691
ydgB c1998 short chain dehydrogenasechromosome CDS1841671 723 + 0.51314
ydiD c2097 hypothetical proteinchromosome CDS1938945 1701 + 0.500882
ydiI c2081 Hypothetical protein ydiIchromosome CDS1921363 411 - 0.508516
ydjB c2172 Nicotinamidasechromosome CDS2009098 660 + 0.527273
yebH c2229 Ribosomal RNA large subunit methyltransferase Achromosome CDS2057923 810 - 0.512346
yecD c2281 Hypothetical isochorismatase family protein yecDchromosome CDS2102370 582 + 0.52921
yecO c2284 Protein yecOchromosome CDS2104255 744 + 0.504032
yecP c2285 Hypothetical protein yecPchromosome CDS2104995 972 + 0.52572
ygcW c3332 Hypothetical oxidoreductase ygcWchromosome CDS3173277 861 - 0.4518
yghA c3739 oxidoreductasechromosome CDS3571536 888 + 0.539414
yhbL c3969 Enhancing lycopene biosynthesis protein 2chromosome CDS3783298 654 - 0.522936
yhiQ c4296 Hypothetical protein yhiQchromosome CDS4076338 816 - 0.590686
yigI c4741 Hypothetical protein yigIchromosome CDS4508659 486 - 0.522634
yjcS c5089 Hypothetical protein yjcSchromosome CDS4863771 1998 - 0.518519
ynbC c1836 Hypothetical protein ynbCchromosome CDS1673255 1758 + 0.515358
yojI c2752 Hypothetical ABC transporter ATP-binding protein yojIchromosome CDS2593915 1644 - 0.531022
yrbC c3952 Protein yrbC precursorchromosome CDS3770749 636 - 0.52044
yrbD c3953 Hypothetical protein yrbD precursorchromosome CDS3771403 567 - 0.492063
yrbE c3954 Hypothetical protein yrbEchromosome CDS3771959 783 - 0.54917
 
Escherichia coli K12, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP b1094 acyl carrier proteinchromosome CDS1150838 237 + 0.481013
bioC b0777 predicted methltransferase, enzyme of biotin synthesischromosome CDS810745 756 + 0.564815
caiC b0037 crotonobetaine/carnitine-CoA ligasechromosome CDS36271 1569 - 0.509879
cchB b2456 predicted carboxysome structural protein, ethanolamine utilization proteinchromosome CDS2569785 288 - 0.53125
ccmA b2201 heme exporter subunitchromosome CDS2295043 624 - 0.559295
cueO b0123 multicopper oxidase (laccase)chromosome CDS137083 1551 + 0.546744
dhaR b1201 predicted DNA-binding transcriptional regulator, dihydroxyacetonechromosome CDS1250289 1920 + 0.514583
elbB b3209 isoprenoid biosynthesis protein with amidotransferase-like domainchromosome CDS3347828 654 - 0.527523
entA b0596 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS627774 747 + 0.579652
entB b0595 isochorismatasechromosome CDS626917 858 + 0.553613
entC b0593 isochorismate synthasechromosome CDS624108 1176 + 0.564626
entD b0583 phosphopantetheinyltransferase component of enterobactin synthase multienzyme complexchromosome CDS608682 630 - 0.474603
entE b0594 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complexchromosome CDS625293 1611 + 0.560521
entF b0586 enterobactin synthase multienzyme complex component, ATP-dependentchromosome CDS613380 3882 + 0.56543
fabB b2323 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2438407 1221 - 0.56593
fabF b1095 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1151162 1242 + 0.533011
fabG b1093 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1149893 735 + 0.515646
fadD b1805 acyl-CoA synthasechromosome CDS1886085 1686 - 0.511862
folM b1606 short chain dehydrogenasechromosome CDS1679000 723 + 0.50899
hcaB b2541 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2669247 813 + 0.560886
hcaF b2539 3-phenylpropionate dioxygenase, small (beta) subunitchromosome CDS2668412 519 + 0.522158
hdhA b1619 7-alpha-hydroxysteroid dehydrogenasechromosome CDS1695297 768 - 0.472656
idnO b4266 gluconate 5-dehydrogenasechromosome CDS4490610 765 - 0.494118
kduD b2842 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2980519 762 - 0.519685
macA b0878 macrolide transporter subunit, membrane fusion protein (MFP) componentchromosome CDS918458 1116 + 0.530466
mdtA b2074 multidrug efflux system, subunit Achromosome CDS2152040 1248 + 0.552885
menE b2260 O-succinylbenzoic acid--CoA ligasechromosome CDS2371670 1356 - 0.560472
menF b2265 menaquinone-specific isochorismate synthasechromosome CDS2377370 1296 - 0.533951
mhpD b0350 2-keto-4-pentenoate hydratasechromosome CDS371339 810 + 0.551852
mhpF b0351 acetaldehyde dehydrogenasechromosome CDS372145 951 + 0.54469
nhoA b1463 N-hydroxyarylamine O-acetyltransferasechromosome CDS1532048 846 + 0.514184
paaB b1389 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradationchromosome CDS1452892 288 + 0.496528
paaI b1396 predicted thioesterasechromosome CDS1458495 423 + 0.515366
pncA b1768 nicotinamidase/pyrazinamidasechromosome CDS1849911 642 + 0.531153
rrmA b1822 23S rRNA m1G745 methyltransferasechromosome CDS1904275 810 - 0.51358
smtA b0921 predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS972760 786 + 0.515267
srlD b2705 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS2825759 780 + 0.533333
sufI b3017 repressor protein for FtsIchromosome CDS3159279 1413 - 0.564048
tauD b0368 taurine dioxygenasechromosome CDS387019 852 + 0.544601
tehB b1430 predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1499586 594 + 0.459596
tynA b1386 tyramine oxidase, copper-requiringchromosome CDS1447100 2274 - 0.506157
ucpA b2426 short chain dehydrogenasechromosome CDS2541854 792 - 0.55303
yafE b0210 predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS231926 624 + 0.490385
yafS b0213 predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS234816 723 + 0.493776
ybbA b0495 predicted transporter subunit: ATP-binding component of ABC superfamilychromosome CDS518957 687 + 0.56623
ybbO b0493 short chain dehydrogenasechromosome CDS517564 810 - 0.54321
ybbP b0496 predicted inner membrane proteinchromosome CDS519640 2415 + 0.575983
ybcY b0562 DLP12 prophage; predicted SAM-dependent methyltransferasechromosome CDS581375 585 - 0.415385
ybdB b0597 hypothetical proteinchromosome CDS628523 414 + 0.567633
ybhF b0794 fused predicted transporter subunits of ABC superfamily: ATP-binding componentschromosome CDS826468 1737 - 0.555556
ycaC b0897 predicted hydrolasechromosome CDS944154 627 - 0.46252
ycdL b1011 predicted enzymechromosome CDS1071394 693 - 0.554113
ycgM b1180 predicted isomerase/hydrolasechromosome CDS1227302 660 + 0.519697
yciK b1271 short chain dehydrogenasechromosome CDS1326378 759 - 0.524374
ydcO b1433 predicted benzoate transporterchromosome CDS1502929 1176 - 0.529762
ydhJ b1644 undecaprenyl pyrophosphate phosphatasechromosome CDS1719288 858 + 0.502331
ydiD b1701 hypothetical proteinchromosome CDS1781001 1701 + 0.49853
ydiI b1686 hypothetical proteinchromosome CDS1763246 411 - 0.515815
yecD b1867 predicted hydrolasechromosome CDS1948856 567 + 0.530864
yecO b1870 predicted methyltransferasechromosome CDS1950726 744 + 0.50672
yecP b1871 predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1951466 972 + 0.520576
yeiN b2165 hypothetical proteinchromosome CDS2255451 939 - 0.497338
yfiC b2575 predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS2710049 738 - 0.52439
ygcW b2774 predicted deoxygluconate dehydrogenasechromosome CDS2897510 786 - 0.456743
ygfF b2902 predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS3043180 744 - 0.549731
yghA b3003 oxidoreductasechromosome CDS3147684 885 + 0.543503
yghX b2999 predicted hydrolase (pseudogene)chromosome CDS3144878 411 - 0.520681
yghY b3000 predicted dienlactone hydrolase (pseudogene)chromosome CDS3145288 354 - 0.525424
yhiQ b3497 predicted SAM-dependent methyltransferasechromosome CDS3640403 753 - 0.581673
yigI b3820 hypothetical proteinchromosome CDS4002253 468 - 0.532051
yjcS b4083 predicted alkyl sulfatasechromosome CDS4302635 1986 - 0.529204
yjgI b4249 predicted oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS4471363 714 - 0.543417
yjhP b4306 KpLE2 phage-like element; predicted methyltransferasechromosome CDS4530460 747 - 0.595716
ymfD b1137 e14 prophage; predicted SAM-dependent methyltransferasechromosome CDS1196090 666 - 0.348348
ynbC b1410 predicted hydrolasechromosome CDS1477162 1758 + 0.509101
yohF b2137 predicted oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS2224531 762 - 0.551181
yojI b2211 fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding componentchromosome CDS2304994 1644 - 0.534063
ypjA b2647 adhesin-like autotransporterchromosome CDS2776168 4581 - 0.492032
yrbC b3192 predicted ABC-type organic solvent transporterchromosome CDS3335278 636 - 0.523585
yrbD b3193 predicted ABC-type organic solvent transporterchromosome CDS3335932 552 - 0.498188
yrbE b3194 predicted toluene transporter subunit: membrane component of ABC superfamilychromosome CDS3336488 783 - 0.551724
ysgA b3830 predicted hydrolasechromosome CDS4013377 816 - 0.545343
 
Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Z5111 hypothetical proteinchromosome CDS4668305 471 - 0.348195
NA Z1533 putative oxidoreductasechromosome CDS1424754 792 + 0.421717
NA Z1550 hypothetical proteinchromosome CDS1445073 1224 + 0.527778
NA Z3393 putative 1,2-dioxygenasechromosome CDS3033320 1029 - 0.555879
NA Z4854 acyl carrier proteinchromosome CDS4403106 252 + 0.488095
NA Z1918 putative membrane protein of prophage CP-933Xchromosome CDS1741294 2922 + 0.545859
NA Z2714 hypothetical proteinchromosome CDS2440130 411 - 0.515815
NA Z2250 putative N-hydroxyarylamine O-acetyltransferasechromosome CDS2034478 735 - 0.512925
NA Z1925 unknown protein encoded by prophage CP-933Xchromosome CDS1747627 669 - 0.406577
NA Z1549 putative beta-ketoacyl-[acyl carrier protein] synthasechromosome CDS1442510 2559 + 0.535365
NA Z4853 putative acyl carrier proteinchromosome CDS4402837 258 + 0.523256
NA Z5352 putative enzymechromosome CDS4880427 882 - 0.531746
NA Z0894 hypothetical proteinchromosome CDS852979 1389 - 0.530598
NA Z2286 putative membrane transport proteinchromosome CDS2066573 1230 + 0.531707
NA Z4866 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS4413564 1230 + 0.549594
NA Z1963 hypothetical proteinchromosome CDS1782294 645 - 0.536434
NA Z5618 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS5111561 807 - 0.51425
NA Z1547 putative acyl-carrier proteinchromosome CDS1440959 282 + 0.407801
NA Z3703 hypothetical proteinchromosome CDS3348165 507 - 0.573964
NA Z1942 putative isomerasechromosome CDS1760972 660 + 0.524242
NA Z2249 hypothetical proteinchromosome CDS2034368 156 - 0.532051
NA Z2317 hypothetical proteinchromosome CDS2091750 1758 - 0.513652
NA Z4850 putative O-methyltransferasechromosome CDS4400223 1059 + 0.458924
NA Z3392 putative isomerase-decarboxylasechromosome CDS3032604 702 - 0.551282
NA Z1545 putative fatty acyl chain reductasechromosome CDS1439630 756 + 0.513228
NA Z0233 hypothetical proteinchromosome CDS235330 771 + 0.490272
NA Z4863 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS4411206 1170 + 0.603419
NA Z1510 putative synthetasechromosome CDS1396763 735 - 0.556463
NA Z4353 putative enzymechromosome CDS3954523 927 - 0.512406
acpP Z1733 acyl carrier proteinchromosome CDS1595796 237 + 0.476793
bioC Z0996 biotin biosynthesis; reaction prior to pimeloyl CoAchromosome CDS935540 756 + 0.56746
caiC Z0043 crotonobetaine/carnitine-CoA ligasechromosome CDS40678 1569 - 0.506055
cchA Z3713 detox proteinchromosome CDS3358187 336 - 0.574405
cchB Z3712 detox proteinchromosome CDS3357793 288 - 0.534722
entA Z0738 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS709803 747 + 0.576975
entB Z0737 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS708946 858 + 0.552448
entC Z0735 isochorismate synthasechromosome CDS706137 1176 + 0.562925
entD Z0723 enterobactin synthetase component Dchromosome CDS690897 630 - 0.487302
entE Z0736 2,3-dihydroxybenzoate-AMP ligasechromosome CDS707322 1611 + 0.556176
entF Z0727 ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F)chromosome CDS695595 3882 + 0.561824
fabB Z3586 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS3236704 1221 - 0.560197
fabF Z1734 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1596120 1242 + 0.531401
fabG Z1732 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1594851 735 + 0.512925
fabG Z4865 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS4412836 732 + 0.565574
fadD Z2848 acyl-CoA synthasechromosome CDS2565094 1686 - 0.515421
hcaA2 Z3810 small terminal subunit of phenylpropionate dioxygenasechromosome CDS3460729 519 + 0.526012
hcaB Z3813 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS3461564 813 + 0.558426
hdhA Z2624 7-alpha-hydroxysteroid dehydrogenasechromosome CDS2372189 768 - 0.472656
kduD Z4162 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3772197 762 - 0.519685
menE Z3520 O-succinylbenzoic acid--CoA ligasechromosome CDS3174117 1356 - 0.561209
menF Z3525 menaquinone-specific isochorismate synthasechromosome CDS3179817 1071 - 0.537815
mhpD Z0448 2-keto-4-pentenoate hydratasechromosome CDS430717 810 + 0.555556
mhpF Z0450 acetaldehyde dehydrogenasechromosome CDS431523 951 + 0.546793
smtA Z1268 S-adenosylmethionine-dependentmethyltransferasechromosome CDS1192402 786 + 0.515267
srlD Z4012 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS3618956 780 + 0.523077
sufI Z4371 suppressor of ftsIchromosome CDS3968922 1413 - 0.564048
tauD Z0467 taurine dioxygenase, 2-oxoglutarate-dependentchromosome CDS448799 852 + 0.542253
tehB Z2288 tellurite resistancechromosome CDS2068811 594 - 0.461279
ucpA Z3691 short chain dehydrogenasechromosome CDS3336951 858 - 0.534965
yacK Z0133 hypothetical proteinchromosome CDS141456 1551 + 0.541586
yafS Z0237 hypothetical proteinchromosome CDS238349 741 + 0.492578
ybbA Z0648 putative ATP-binding component of a transport systemchromosome CDS613224 687 + 0.569141
ybbO Z0646 short chain dehydrogenasechromosome CDS611831 810 - 0.546914
ybbP Z0649 putative oxidoreductasechromosome CDS613907 2415 + 0.578468
ybdB Z0739 hypothetical proteinchromosome CDS710552 414 + 0.582126
ycaC Z1243 hypothetical proteinchromosome CDS1165267 627 - 0.45933
yciK Z2539 short chain dehydrogenasechromosome CDS2257357 759 + 0.517787
ydgB Z2606 short chain dehydrogenasechromosome CDS2356063 723 + 0.507607
ydiD Z2730 hypothetical proteinchromosome CDS2457892 1701 + 0.499118
ydjB Z2802 hypothetical proteinchromosome CDS2527375 660 + 0.528788
yebH Z2866 putative enzymechromosome CDS2583287 810 - 0.509877
yecD Z2920 hypothetical proteinchromosome CDS2627937 600 + 0.52
yecO Z2923 hypothetical proteinchromosome CDS2629840 744 + 0.50672
yecP Z2924 putative enzymechromosome CDS2630580 972 + 0.516461
yeiN Z3422 hypothetical proteinchromosome CDS3063625 939 - 0.490948
ygcW Z4085 putative oxidoreductasechromosome CDS3686903 861 - 0.457607
yghA Z4356 oxidoreductasechromosome CDS3957332 885 + 0.542373
yhbL Z4573 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS4159375 663 - 0.523379
yhiQ Z4897 hypothetical proteinchromosome CDS4443917 753 - 0.589641
yigI Z5341 hypothetical proteinchromosome CDS4869304 486 - 0.522634
yjcS Z5683 hypothetical proteinchromosome CDS5187282 1998 - 0.523524
yjgI Z5861 oxidoreductasechromosome CDS5358863 714 - 0.540616
yohF Z3386 oxidoreductasechromosome CDS3026689 762 - 0.543307
yojI Z3469 putative ATP-binding component of a transport systemchromosome CDS3111228 1644 - 0.532847
yrbC Z4555 hypothetical proteinchromosome CDS4146825 636 - 0.523585
yrbD Z4556 hypothetical proteinchromosome CDS4147479 552 - 0.498188
yrbE Z4557 hypothetical proteinchromosome CDS4148035 783 - 0.551724
 
Escherichia coli O157:H7 str. Sakai, Sakai
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECs0556 short chain dehydrogenasechromosome CDS612137 810 - 0.546914
NA ECs0422 taurine dioxygenasechromosome CDS448797 852 + 0.542253
NA ECs5226 oxidoreductasechromosome CDS5328878 714 - 0.540616
NA ECs5003 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS5081575 807 - 0.515489
NA ECs2393 hypothetical proteinchromosome CDS2364934 411 - 0.515815
NA ECs0763 putative glutamate mutase Lchromosome CDS851325 1389 - 0.530598
NA ECs0632 isochorismate synthasechromosome CDS706355 1176 + 0.562925
NA ECs3153 menaquinone-specific isochorismate synthasechromosome CDS3109861 1296 - 0.536265
NA ECs3884 hypothetical proteinchromosome CDS3887210 888 - 0.516892
NA ECs1257 putative synthetasechromosome CDS1312991 696 - 0.548851
NA ECs1473 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1511034 1242 + 0.531401
NA ECs1650 putative tail fiber proteinchromosome CDS1649515 2916 + 0.546639
NA ECs3207 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS3166748 1221 - 0.562654
NA ECs1287 putative acyl carrier proteinchromosome CDS1357196 273 + 0.406593
NA ECs3057 hypothetical proteinchromosome CDS2992357 939 - 0.490948
NA ECs2038 hypothetical proteinchromosome CDS2020671 1173 - 0.532822
NA ECs4560 CesTchromosome CDS4599322 471 - 0.348195
NA ECs3148 O-succinylbenzoic acid--CoA ligasechromosome CDS3104161 1356 - 0.561209
NA ECs0209 hypothetical proteinchromosome CDS238348 741 + 0.492578
NA ECs4328 putative acyl carrier proteinchromosome CDS4335616 258 + 0.523256
NA ECs0040 crotonobetaine/carnitine-CoA ligasechromosome CDS40677 1569 - 0.506055
NA ECs3630 putative oxidoreductasechromosome CDS3619605 786 - 0.46056
NA ECs4341 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS4346343 1230 + 0.550407
NA ECs1656 hypothetical proteinchromosome CDS1655842 432 - 0.412037
NA ECs1285 putative 3-oxoacyl-(acyl carrier protein) reductasechromosome CDS1356044 570 + 0.545614
NA ECs0635 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS710021 747 + 0.576975
NA ECs3319 detox proteinchromosome CDS3288353 336 - 0.574405
NA ECs0855 BioCchromosome CDS933888 756 + 0.56746
NA ECs0633 2,3-dihydroxybenzoate-AMP ligasechromosome CDS707540 1611 + 0.557418
NA ECs2580 hypothetical proteinchromosome CDS2554632 744 + 0.50672
NA ECs0622 enterochelin synthetase, component Dchromosome CDS691115 630 - 0.487302
NA ECs4088 sigma cross-reacting protein 27Achromosome CDS4092159 654 - 0.527523
NA ECs1472 acyl carrier proteinchromosome CDS1510710 237 + 0.476793
NA ECs2408 hypothetical proteinchromosome CDS2382745 1647 + 0.497268
NA ECs0406 acetaldehyde dehydrogenasechromosome CDS431521 951 + 0.546793
NA ECs0206 putative biotin synthesis proteinchromosome CDS235329 771 + 0.490272
NA ECs0636 hypothetical proteinchromosome CDS710770 414 + 0.582126
NA ECs3318 detox proteinchromosome CDS3287959 288 - 0.534722
NA ECs3030 putative gentisate 1,2-dioxygenasechromosome CDS2962054 1029 - 0.555879
NA ECs0634 2,3-dihydro-2,3-dihydroxybenzoate synthetasechromosome CDS709164 858 + 0.552448
NA ECs3029 putative isomerasechromosome CDS2961338 702 - 0.551282
NA ECs0557 putative ATP-binding component of a transport systemchromosome CDS613530 687 + 0.569141
NA ECs0127 hypothetical proteinchromosome CDS141455 1551 + 0.541586
NA ECs2012 hypothetical proteinchromosome CDS1994971 1758 + 0.513652
NA ECs3309 hypothetical proteinchromosome CDS3278331 501 - 0.57485
NA ECs3407 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS3391726 813 + 0.558426
NA ECs1290 hypothetical proteinchromosome CDS1361544 981 + 0.530071
NA ECs2581 hypothetical proteinchromosome CDS2555372 972 + 0.516461
NA ECs3024 oxidoreductasechromosome CDS2955422 762 - 0.545932
NA ECs3887 oxidoreductasechromosome CDS3890019 885 + 0.542373
NA ECs4338 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS4343985 1170 + 0.603419
NA ECs3405 phenylpropionate dioxygenase small terminal subunitchromosome CDS3390891 519 + 0.526012
NA ECs3901 suppressor of ftsIchromosome CDS3901608 1413 - 0.564048
NA ECs4073 hypothetical proteinchromosome CDS4080819 783 - 0.551724
NA ECs2035 TehBchromosome CDS2019071 594 + 0.461279
NA ECs4760 hypothetical proteinchromosome CDS4811663 882 - 0.531746
NA ECs3297 short chain dehydrogenasechromosome CDS3267117 792 - 0.549242
NA ECs2514 acyl-CoA synthasechromosome CDS2489890 1686 - 0.516014
NA ECs4072 hypothetical proteinchromosome CDS4080263 552 - 0.498188
NA ECs2312 short chain dehydrogenasechromosome CDS2280777 723 + 0.507607
NA ECs2066 hypothetical proteinchromosome CDS2053261 735 + 0.512925
NA ECs2577 hypothetical proteinchromosome CDS2552729 600 + 0.52
NA ECs3100 putative ATP-binding component of a transport systemchromosome CDS3039959 1644 - 0.532847
NA ECs3561 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS3551659 780 + 0.523077
NA ECs0559 putative oxidoreductasechromosome CDS614213 2415 + 0.578468
NA ECs1675 putative isomerasechromosome CDS1669565 660 + 0.524242
NA ECs0405 2-keto-4-pentenoate hydratasechromosome CDS430715 810 + 0.555556
NA ECs2532 hypothetical proteinchromosome CDS2508081 810 - 0.509877
NA ECs3699 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3704898 762 - 0.52231
NA ECs2327 7-alpha-hydroxysteroid dehydrogenasechromosome CDS2296902 768 - 0.472656
NA ECs1696 hypothetical proteinchromosome CDS1690888 645 - 0.536434
NA ECs1843 short chain dehydrogenasechromosome CDS1829061 759 - 0.517787
NA ECs4325 putative O-methyltransferasechromosome CDS4332999 1062 + 0.45951
NA ECs1275 putative oxidoreductasechromosome CDS1340991 783 + 0.422733
NA ECs4750 hypothetical proteinchromosome CDS4800540 468 - 0.532051
NA ECs1004 S-adenosylmethionine-dependentmethyltransferasechromosome CDS1103179 786 + 0.516539
NA ECs4369 hypothetical proteinchromosome CDS4376692 753 - 0.589641
NA ECs2475 hypothetical proteinchromosome CDS2452172 660 + 0.528788
NA ECs4329 acyl carrier proteinchromosome CDS4335885 252 + 0.492063
NA ECs0625 EntFchromosome CDS695813 3882 + 0.562339
NA ECs4071 hypothetical proteinchromosome CDS4079609 636 - 0.523585
NA ECs5066 hypothetical proteinchromosome CDS5157297 1998 - 0.524024
NA ECs1289 putative 3-oxoacyl-[acyl-carrier-protein] synthase synthasechromosome CDS1358738 2559 + 0.535365
NA ECs0982 hypothetical proteinchromosome CDS1076044 627 - 0.460925
fabG ECs1471 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1509765 735 + 0.512925
fabG ECs4340 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS4345615 732 + 0.565574
 
Escherichia coli UTI89, UTI89
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA UTI89_C2221 putative polyketide synthasechromosome CDS2152813 2610 - 0.550192
NA UTI89_C4813 putative oxoacyl reductasechromosome CDS4707991 792 - 0.530303
NA UTI89_C3421 putative enzymechromosome CDS3357679 927 - 0.523193
NA UTI89_C1564 acriflavine resistance protein Bchromosome CDS1474282 3108 + 0.520914
NA UTI89_C0565 hypothetical protein YbcY precursorchromosome CDS570159 666 - 0.40991
NA UTI89_C2222 putative peptide/polyketide synthasechromosome CDS2155454 9630 - 0.533333
NA UTI89_C1609 putative secretion proteinchromosome CDS1520401 1029 + 0.462585
NA UTI89_C2213 putative peptide synthetasechromosome CDS2128312 6465 - 0.563496
NA UTI89_C1394 glycerol metabolism operon regulatory proteinchromosome CDS1329706 1929 + 0.514256
NA UTI89_C4410 putative carboxymethylenebutenolidasechromosome CDS4296234 876 - 0.527397
NA UTI89_C1522 unknown protein encoded by prophage CP-933Xchromosome CDS1433896 666 - 0.411411
NA UTI89_C3399 acyl carrier protein, putativechromosome CDS3336843 249 + 0.409639
NA UTI89_C3245 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3172935 762 - 0.519685
NA UTI89_C2210 putative peptide synthetasechromosome CDS2120991 4455 - 0.539169
NA UTI89_C2180 putative ABC transporter proteinchromosome CDS2074098 1830 - 0.583607
NA UTI89_C2215 putative polyketide synthasechromosome CDS2141331 3033 - 0.569073
NA UTI89_C1385 hypothetical proteinchromosome CDS1320413 813 - 0.549815
NA UTI89_C2219 hypothetical proteinchromosome CDS2151656 249 - 0.39759
NA UTI89_C2411 putative oxidoreductasechromosome CDS2367700 762 - 0.551181
NA UTI89_C2214 putative peptide synthetasechromosome CDS2134787 6501 - 0.561144
NA UTI89_C2216 hypothetical proteinchromosome CDS2144413 4812 - 0.553616
NA UTI89_C2209 putative polyketide synthasechromosome CDS2118501 2460 - 0.521138
NA UTI89_C2207 putative thioesterasechromosome CDS2116259 723 - 0.460581
NA UTI89_C4409 hypothetical proteinchromosome CDS4295309 600 - 0.506667
NA UTI89_C0574 putative resistance proteinchromosome CDS582933 1224 + 0.558007
acpP UTI89_C1220 acyl carrier proteinchromosome CDS1196579 237 + 0.481013
acrD UTI89_C2796 probable aminoglycoside efflux pumpchromosome CDS2737221 3114 + 0.545279
acrF UTI89_C3708 acriflavine resistance protein Fchromosome CDS3632991 3105 + 0.510145
bioC UTI89_C0775 biotin synthesis protein BioCchromosome CDS774580 795 + 0.56478
caiC UTI89_C0043 probable crotonobetaine/carnitine-CoA ligasechromosome CDS38906 1569 - 0.508604
ccmA UTI89_C2479 heme exporter protein Achromosome CDS2433901 624 - 0.554487
cydC UTI89_C0901 transport ATP-binding protein CydCchromosome CDS897856 1722 - 0.534843
cydD UTI89_C0902 transport ATP-binding protein CydDchromosome CDS899578 1767 - 0.532541
emrK UTI89_C2700 multidrug resistance protein Kchromosome CDS2643444 1164 - 0.414948
entA UTI89_C0598 2,3-dihydro-2,3-dihydroxybenzoatechromosome CDS612472 747 + 0.57162
entB UTI89_C0597 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS611615 858 + 0.548951
entC UTI89_C0595 isochorismate synthasechromosome CDS608794 1188 + 0.557239
entD UTI89_C0583 4'-phosphopantetheinyl transferase EntDchromosome CDS593566 771 - 0.485084
entE UTI89_C0596 enterobactin synthetase component Echromosome CDS609991 1611 + 0.564867
entF UTI89_C0588 enterobactin synthetase component Fchromosome CDS598264 3882 + 0.563112
eutK UTI89_C2771 ethanolamine utilization protein EutKchromosome CDS2711662 507 - 0.579882
eutM UTI89_C2781 detox proteinchromosome CDS2721801 336 - 0.568452
eutN UTI89_C2780 detox proteinchromosome CDS2721407 288 - 0.538194
fabB UTI89_C2608 bifunctional beta-ketoacyl-ACP synthase I/malonyl-ACP decarboxylasechromosome CDS2572798 1221 - 0.561016
fabF UTI89_C1221 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1196902 1242 + 0.533011
fabG UTI89_C1218 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1195634 735 + 0.515646
fadD UTI89_C1999 long chain fatty acid CoA-ligasechromosome CDS1914750 1752 - 0.509132
hdhA UTI89_C1807 7-alpha-hydroxysteroid dehydrogenasechromosome CDS1737529 768 - 0.471354
hlyA UTI89_C4926 hemolysin Achromosome CDS4825022 3075 - 0.405528
hlyB UTI89_C4925 hemolysin secretion protein HlyBchromosome CDS4822828 2124 - 0.403955
hlyD UTI89_C4924 hemolysin Dchromosome CDS4821373 1437 - 0.395268
ibgR UTI89_C5033 putative regulatory protein IbgRchromosome CDS4934895 1950 + 0.395897
idnO UTI89_C4873 5-keto-D-gluconate 5-reductasechromosome CDS4774294 765 - 0.494118
iroC UTI89_C1121 IroC proteinchromosome CDS1112788 3786 - 0.576334
irp1 UTI89_C2184 HMWP1 nonribosomal peptide/polyketide synthasechromosome CDS2085201 9492 + 0.605984
irp2 UTI89_C2183 putative peptide synthetase-like proteinchromosome CDS2078988 6126 + 0.600555
macA UTI89_C0883 macrolide-specific efflux protein MacA precursorchromosome CDS879993 1143 + 0.527559
mdlB UTI89_C0477 multidrug resistance-like ATP-binding protein mdlBchromosome CDS484652 1896 + 0.560127
menE UTI89_C2543 O-succinylbenzoic acid--CoA ligasechromosome CDS2509668 1356 - 0.565634
menF UTI89_C2549 menaquinone-specific isochorismate synthasechromosome CDS2515368 1296 - 0.532407
nhoA UTI89_C1681 N-hydroxyarylamine O-acetyltransferasechromosome CDS1602737 846 + 0.503546
phnM UTI89_C4690 PhnM proteinchromosome CDS4590328 1137 - 0.597186
repB UTI89_P002 replication protein RepB-like proteinpUTI89 CDS831 261 + 0.402299
smtA UTI89_C0993 S-adenosylmethionine-dependentmethyltransferasechromosome CDS978030 798 + 0.515038
srlD UTI89_C3067 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS2986130 780 + 0.532051
sufI UTI89_C3443 FtsI suppressorchromosome CDS3379534 1413 - 0.558386
tam UTI89_C1738 putative trans-aconitate 2-methyltransferasechromosome CDS1664576 759 + 0.546772
tauD UTI89_C0387 alpha-ketoglutarate-dependent taurine dioxygenasechromosome CDS403279 852 + 0.545775
tehB UTI89_C1650 tellurite resistance protein TehBchromosome CDS1574832 594 + 0.468013
ucpA UTI89_C2759 oxidoreductase UcpAchromosome CDS2702507 858 - 0.536131
yafE UTI89_C0229 conserved hypothetical protein YafEchromosome CDS236748 771 + 0.491569
yafS UTI89_C0232 hypothetical protein YafSchromosome CDS239766 741 + 0.497976
ybbO UTI89_C0528 putative oxidoreductasechromosome CDS536324 810 - 0.537037
ybdB UTI89_C0599 hypothetical proteinchromosome CDS613221 414 + 0.584541
ybhG UTI89_C0796 hypothetical membrane protein YbhGchromosome CDS791918 999 - 0.576577
ybtE UTI89_C2187 yersiniabactin siderophore biosynthetic proteinchromosome CDS2096593 1578 + 0.586185
ybtP UTI89_C2181 putative inner membrane ABC-transporterchromosome CDS2075887 1803 - 0.571825
ybtT UTI89_C2186 YbtT proteinchromosome CDS2095801 789 + 0.588086
ycaC UTI89_C0970 protein YcaCchromosome CDS952661 726 - 0.464187
ycdL UTI89_C1074 hypothetical isochorismatase family protein ycdLchromosome CDS1059103 735 - 0.563265
ycgM UTI89_C1366 putative isomerasechromosome CDS1301528 660 + 0.525758
yciK UTI89_C1539 hypothetical oxidoreductase YciKchromosome CDS1449301 759 - 0.523057
ydcO UTI89_C1652 hypothetical protein YdcOchromosome CDS1576431 1296 - 0.525463
ydgB UTI89_C1794 hypothetical oxidoreductase YdgBchromosome CDS1721406 723 + 0.50899
ydhJ UTI89_C1835 hypothetical protein YdhJchromosome CDS1761383 900 + 0.507778
ydiD UTI89_C1894 hypothetical protein YdiDchromosome CDS1818564 1701 + 0.500882
ydiI UTI89_C1878 hypothetical protein YdiIchromosome CDS1800982 411 - 0.506083
ydjB UTI89_C1964 pyrazinamidase/nicotinamidasechromosome CDS1884116 660 + 0.527273
yebH UTI89_C2020 ribosomal RNA large subunit methyltransferase Achromosome CDS1932940 810 - 0.511111
yecD UTI89_C2071 hypothetical proteinchromosome CDS1977451 582 + 0.534364
yecO UTI89_C2074 hypothetical proteinchromosome CDS1979336 744 + 0.5
yecP UTI89_C2075 hypothetical proteinchromosome CDS1980076 972 + 0.526749
yeeO UTI89_C2199 hypothetical protein YeeOchromosome CDS2109870 1638 - 0.484737
yegM UTI89_C2349 hypothetical protein YegM precursorchromosome CDS2291249 1395 + 0.534767
yegO UTI89_C2351 hypothetical protein YegOchromosome CDS2295766 3078 + 0.562703
yeiN UTI89_C2439 hypothetical proteinchromosome CDS2397445 939 - 0.467519
ygcW UTI89_C3137 hypothetical oxidoreductase YgcWchromosome CDS3052252 861 - 0.458769
yghA UTI89_C3424 hypothetical oxidoreductase YghAchromosome CDS3360485 888 + 0.539414
yhiH UTI89_C4007 hypothetical ABC transporter ATP-binding protein yhiHchromosome CDS3892511 2736 - 0.563596
yhiI UTI89_C4008 hypothetical proteinchromosome CDS3895243 1068 - 0.582397
yhiQ UTI89_C4016 hypothetical protein YhiQchromosome CDS3904173 816 - 0.593137
yhiV UTI89_C4046 hypothetical protein YhiVchromosome CDS3927193 3114 + 0.530186
yigI UTI89_C4383 hypothetical protein YigIchromosome CDS4269233 486 - 0.520576
yjcS UTI89_C4679 hypothetical protein YjcSchromosome CDS4578974 1998 - 0.524525
yojI UTI89_C2491 hypothetical ABC transporter ATP-binding protein yojIchromosome CDS2443287 1644 - 0.526156
yrbE UTI89_C3630 hypothetical proteinchromosome CDS3558144 783 - 0.550447
 
Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP acyl carrier proteinchromosome CDS1153192 237 + 0.481013
bioC predicted methltransferase, enzyme of biotin synthesischromosome CDS811944 756 + 0.564815
caiC predicted crotonobetaine CoA ligase:carnitine CoA ligasechromosome CDS36271 1569 - 0.509879
cchB predicted carboxysome structural protein, ethanolamine utilization proteinchromosome CDS2570419 288 - 0.53125
ccmA heme exporter subunitchromosome CDS2300355 624 - 0.559295
cueO multicopper oxidase (laccase)chromosome CDS137083 1551 + 0.546744
dhaR predicted DNA-binding transcriptional regulator, dihydroxyacetonechromosome CDS1252643 1920 + 0.514583
elbB isoprenoid biosynthesis protein with amidotransferase-like domainchromosome CDS3349661 654 - 0.527523
entA 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS627774 747 + 0.579652
entB isochorismatasechromosome CDS626917 858 + 0.553613
entC isochorismate synthase 1chromosome CDS624108 1176 + 0.564626
entD phosphopantetheinyltransferase component of enterobactin synthase multienzyme complexchromosome CDS608682 630 - 0.474603
entE 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complexchromosome CDS625293 1611 + 0.560521
entF enterobactin synthase multienzyme complex component, ATP-dependentchromosome CDS613380 3882 + 0.56543
fabB 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2445831 1221 - 0.56593
fabF 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1153516 1242 + 0.533011
fabG 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1152247 735 + 0.515646
fadD acyl-CoA synthetasechromosome CDS1889775 1686 - 0.511862
folM dihydrofolate reductase isozymechromosome CDS1682690 723 + 0.50899
hcaB 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2669881 813 + 0.560886
hcaF 3-phenylpropionate dioxygenase, small (beta) subunitchromosome CDS2669046 519 + 0.522158
hdhA 7alpha-hydroxysteroid dehydrogenase, NAD-dependentchromosome CDS1698987 768 - 0.472656
idnO 5-keto-D-gluconate-5-reductasechromosome CDS4497267 765 - 0.494118
kduD 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2981153 762 - 0.519685
macA macrolide transporter subunit, membrane fusion protein (MFP) componentchromosome CDS919657 1116 + 0.530466
mdtA multidrug efflux system, subunit Achromosome CDS2156153 1248 + 0.552885
menE o-succinylbenzoate-CoA ligasechromosome CDS2378318 1356 - 0.560472
menF isochorismate synthase 2chromosome CDS2384018 1296 - 0.533951
mhpD 2-keto-4-pentenoate hydratasechromosome CDS371339 810 + 0.551852
mhpF acetaldehyde-CoA dehydrogenase II, NAD-bindingchromosome CDS372145 951 + 0.54469
nhoA N-hydroxyarylamine O-acetyltransferasechromosome CDS1535738 846 + 0.514184
paaB predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradationchromosome CDS1456582 288 + 0.496528
paaI predicted thioesterasechromosome CDS1462185 423 + 0.515366
pncA nicotinamidase/pyrazinamidasechromosome CDS1853601 642 + 0.531153
rrmA 23S rRNA m1G745 methyltransferasechromosome CDS1907965 810 - 0.51358
smtA S-adenosylmethionine-dependentmethyltransferasechromosome CDS973959 786 + 0.515267
srlD sorbitol-6-phosphate dehydrogenasechromosome CDS2826393 780 + 0.533333
sufI repressor protein for FtsIchromosome CDS3159913 1413 - 0.564048
tauD taurine dioxygenase, 2-oxoglutarate-dependentchromosome CDS387019 852 + 0.544601
tehB predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1503276 594 + 0.459596
tynA tyramine oxidase, copper-requiringchromosome CDS1450790 2274 - 0.506157
ucpA predicted oxidoredutase, sulfate metabolism proteinchromosome CDS2549278 792 - 0.55303
yafE predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS231926 624 + 0.490385
yafS predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS234816 723 + 0.493776
ybbA predicted transporter subunitchromosome CDS518957 687 + 0.56623
ybbO predicted oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS517564 810 - 0.54321
ybbP predicted inner membrane proteinchromosome CDS519640 2415 + 0.575983
ybcY predicted SAM-dependent methyltransferasechromosome CDS581375 585 - 0.415385
ybdB hypothetical proteinchromosome CDS628523 414 + 0.567633
ybhF fused predicted transporter subunits and ATP-binding components of ABC superfamilychromosome CDS827667 1737 - 0.555556
ycaC predicted hydrolasechromosome CDS945353 627 - 0.46252
ycdL hypothetical proteinchromosome CDS1072593 693 - 0.554113
ycgM predicted isomerase/hydrolasechromosome CDS1229656 660 + 0.519697
yciK predicted oxoacyl-(acyl carrier protein) reductase, EmrKY-TolC systemchromosome CDS1330068 759 - 0.524374
ydcO predicted benzoate transporterchromosome CDS1506619 1176 - 0.529762
ydhJ undecaprenyl pyrophosphate phosphatasechromosome CDS1722978 858 + 0.502331
ydiD short chain acyl-CoA synthetase, anaerobicchromosome CDS1784691 1701 + 0.49853
ydiI hypothetical proteinchromosome CDS1766936 411 - 0.515815
yecD predicted hydrolasechromosome CDS1952546 567 + 0.530864
yecO predicted methyltransferasechromosome CDS1954416 744 + 0.50672
yecP predicted methyltransferasechromosome CDS1955156 972 + 0.520576
yeiN hypothetical proteinchromosome CDS2260763 939 - 0.497338
yfiC predicted methyltransferasechromosome CDS2710683 738 - 0.52439
ygcW predicted deoxygluconate dehydrogenasechromosome CDS2898144 786 - 0.456743
ygfF predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS3043814 744 - 0.549731
yghA predicted glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domainchromosome CDS3148318 885 + 0.543503
yghX chromosome pseudo3145512 411 - 0.520681
yghX chromosome pseudo3145512 411 - 0.520681
yhiQ predicted SAM-dependent methyltransferasechromosome CDS3997283 753 + 0.581673
yigI hypothetical proteinchromosome CDS3631984 468 + 0.532051
yjcS predicted alkyl sulfatasechromosome CDS4308091 1986 - 0.529204
yjgI predicted oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS4478020 714 - 0.543417
yjhP predicted methyltransferasechromosome CDS4537117 747 - 0.595716
ymfD predicted SAM-dependent methyltransferasechromosome CDS1198444 666 - 0.348348
ynbC predicted hydrolasechromosome CDS1480852 1758 + 0.509101
yohF predicted oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS2229843 762 - 0.551181
yojI fused predicted multidrug transport subunits and membrane component and ATP-binding component of ABC superfamilychromosome CDS2310306 1644 - 0.534063
ypjA adhesin-like autotransporterchromosome CDS2776802 4581 - 0.492032
yrbC predicted ABC-type organic solvent transporterchromosome CDS3337111 636 - 0.523585
yrbD predicted ABC-type organic solvent transporterchromosome CDS3337765 552 - 0.498188
yrbE predicted toluene transporter subunitchromosome CDS3338321 783 - 0.551724
ysgA predicted hydrolasechromosome CDS3620512 816 + 0.545343
 
Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA plu3532 hypothetical proteinchromosome CDS4132061 9816 - 0.452119
NA plu2140 hypothetical proteinchromosome CDS2523480 657 + 0.452055
NA plu0977 hypothetical proteinchromosome CDS1160183 747 - 0.457831
NA plu4191 hypothetical proteinchromosome CDS4904466 1287 - 0.425019
NA plu2237 hypothetical proteinchromosome CDS2631904 948 + 0.361814
NA plu2102 hypothetical proteinchromosome CDS2487210 972 - 0.455761
NA plu2239 hypothetical proteinchromosome CDS2633894 978 - 0.445808
NA plu4258 hypothetical proteinchromosome CDS4981557 1446 - 0.399723
NA plu3560 hypothetical proteinchromosome CDS4193684 1296 - 0.465278
NA plu0841 hypothetical proteinchromosome CDS973244 540 + 0.451852
NA plu2450 short chain dehydrogenasechromosome CDS2877523 765 + 0.469281
NA plu2258 hypothetical proteinchromosome CDS2650221 1194 - 0.386097
NA plu2323 hypothetical proteinchromosome CDS2739282 777 + 0.471042
NA plu4032 hypothetical proteinchromosome CDS4723189 507 - 0.447732
NA plu4630 hypothetical proteinchromosome CDS5397777 2418 + 0.435484
NA plu2816 hypothetical proteinchromosome CDS3345783 978 + 0.373211
NA plu4189 hypothetical proteinchromosome CDS4903075 249 - 0.333333
NA plu4194 hypothetical proteinchromosome CDS4907928 777 - 0.406692
NA plu0246 hypothetical proteinchromosome CDS262042 1554 + 0.45045
NA plu4678 hypothetical proteinchromosome CDS5454513 744 + 0.435484
NA plu1341 hypothetical proteinchromosome CDS1577798 11019 + 0.471458
NA plu1219 hypothetical proteinchromosome CDS1409456 1236 + 0.442557
NA plu4891 hypothetical proteinchromosome CDS5664296 954 - 0.319706
NA plu2219 hypothetical proteinchromosome CDS2607476 246 + 0.292683
NA plu1541 hypothetical proteinchromosome CDS1843750 747 - 0.460509
NA plu4890 hypothetical proteinchromosome CDS5662379 957 - 0.327064
NA plu2796 hypothetical proteinchromosome CDS3320221 2808 + 0.433048
NA plu4351 hypothetical proteinchromosome CDS5084097 939 - 0.455804
NA plu4336 hypothetical proteinchromosome CDS5064178 1473 + 0.367278
NA plu4836 hypothetical proteinchromosome CDS5609561 720 + 0.318056
NA plu3668 hypothetical proteinchromosome CDS4318729 1266 + 0.380727
NA plu4268 hypothetical proteinchromosome CDS4993354 1302 + 0.364823
NA plu0296 hypothetical proteinchromosome CDS313663 1224 - 0.373366
NA plu1210 hypothetical proteinchromosome CDS1392054 972 + 0.424897
NA plu0756 hypothetical proteinchromosome CDS871792 1566 - 0.39719
NA plu2625 hypothetical proteinchromosome CDS3070999 417 - 0.448441
NA plu2733 hypothetical proteinchromosome CDS3241008 4392 + 0.38775
NA plu4631 hypothetical proteinchromosome CDS5400490 471 + 0.426752
NA plu1880 hypothetical proteinchromosome CDS2226516 12483 - 0.487543
NA plu1211 hypothetical proteinchromosome CDS1393004 1785 + 0.419608
NA plu4621 hypothetical proteinchromosome CDS5385534 1824 + 0.427632
NA plu0998 hypothetical proteinchromosome CDS1183567 294 + 0.404762
NA plu0897 hypothetical proteinchromosome CDS1021625 3507 + 0.410607
NA plu4833 hypothetical proteinchromosome CDS5607629 699 + 0.340486
NA plu3921 hypothetical proteinchromosome CDS4598801 1854 - 0.455771
NA plu2201 hypothetical proteinchromosome CDS2589485 783 - 0.440613
NA plu2186 hypothetical proteinchromosome CDS2570086 3855 + 0.378988
NA plu2966 hypothetical proteinchromosome CDS3472144 906 - 0.497792
NA plu2322 hypothetical proteinchromosome CDS2738158 1098 + 0.461749
NA plu4027 hypothetical proteinchromosome CDS4718277 1560 + 0.433333
NA plu1885 hypothetical proteinchromosome CDS2247626 1851 + 0.460832
NA plu0511 hypothetical proteinchromosome CDS561985 1206 - 0.484245
NA plu2075 hypothetical proteinchromosome CDS2458486 693 + 0.401154
NA plu2103 hypothetical proteinchromosome CDS2488178 759 - 0.440053
NA plu3534 hypothetical proteinchromosome CDS4145277 9813 - 0.472027
NA plu4033 hypothetical proteinchromosome CDS4723700 783 - 0.508301
NA plu2187 hypothetical proteinchromosome CDS2574027 957 + 0.434692
NA plu4183 hypothetical proteinchromosome CDS4894114 1104 - 0.355978
NA plu2353 hypothetical proteinchromosome CDS2772416 1113 - 0.439353
NA plu3530 hypothetical proteinchromosome CDS4128470 1677 - 0.35003
NA plu4262 hypothetical proteinchromosome CDS4986690 1326 + 0.361237
NA plu4510 hypothetical proteinchromosome CDS5269014 1587 + 0.47511
NA plu4629 hypothetical proteinchromosome CDS5396476 1302 + 0.403994
NA plu2320 hypothetical proteinchromosome CDS2720286 6150 + 0.47252
NA plu2798 pteridine reductasechromosome CDS3324441 765 + 0.426144
NA plu4190 hypothetical proteinchromosome CDS4903358 1116 - 0.396953
NA plu1217 hypothetical proteinchromosome CDS1407172 765 + 0.445752
NA plu1323 hypothetical proteinchromosome CDS1539045 450 + 0.38
NA plu3130 hypothetical proteinchromosome CDS3678528 9936 - 0.529589
NA plu1001 hypothetical proteinchromosome CDS1186748 450 + 0.308889
NA plu3923 hypothetical proteinchromosome CDS4601127 588 - 0.433673
NA plu0123 hypothetical proteinchromosome CDS129035 744 - 0.505376
NA plu0250 hypothetical proteinchromosome CDS267752 744 + 0.399194
NA plu2737 hypothetical proteinchromosome CDS3248491 231 + 0.402597
NA plu3102 hypothetical proteinchromosome CDS3621255 825 - 0.518788
NA plu3819 short chain dehydrogenasechromosome CDS4487463 786 + 0.455471
NA plu3531 hypothetical proteinchromosome CDS4130187 1839 - 0.387167
NA plu3123 hypothetical proteinchromosome CDS3646119 16374 - 0.530231
NA plu2817 hypothetical proteinchromosome CDS3346772 846 + 0.373522
NA plu0899 hypothetical proteinchromosome CDS1029858 6030 + 0.42272
NA plu3533 hypothetical proteinchromosome CDS4141873 3402 - 0.461199
NA plu0760 hypothetical proteinchromosome CDS878406 1578 - 0.345374
NA plu4034 hypothetical proteinchromosome CDS4724493 804 - 0.455224
NA plu1878 hypothetical proteinchromosome CDS2222028 3198 - 0.469043
NA plu4892 hypothetical proteinchromosome CDS5665879 954 - 0.323899
NA plu4117 hypothetical proteinchromosome CDS4803949 1158 - 0.313471
NA plu4419 hypothetical proteinchromosome CDS5167715 834 - 0.340528
NA plu2313 hypothetical proteinchromosome CDS2709005 1854 + 0.445523
NA plu4031 hypothetical proteinchromosome CDS4722526 630 - 0.433333
NA plu2165 hypothetical proteinchromosome CDS2550941 243 + 0.386831
NA plu0941 hypothetical proteinchromosome CDS1083473 714 + 0.442577
NA plu2408 hypothetical proteinchromosome CDS2827701 1386 - 0.310245
NA plu4675 hypothetical proteinchromosome CDS5451987 237 + 0.337553
NA plu4894 hypothetical proteinchromosome CDS5668798 954 - 0.33543
NA plu4676 hypothetical proteinchromosome CDS5452379 1266 + 0.456556
NA plu1212 hypothetical proteinchromosome CDS1394785 3804 + 0.456625
NA plu3135 hypothetical proteinchromosome CDS3694556 1611 - 0.402855
NA plu0898 hypothetical proteinchromosome CDS1025128 4734 + 0.436206
NA plu1004 hypothetical proteinchromosome CDS1190069 948 + 0.35443
NA plu0972 hypothetical proteinchromosome CDS1151820 720 + 0.3875
NA plu1871 hypothetical proteinchromosome CDS2215467 786 + 0.431298
NA plu4895 hypothetical proteinchromosome CDS5670464 954 - 0.324948
NA plu1220 hypothetical proteinchromosome CDS1410701 3183 + 0.431668
NA plu2642 hypothetical proteinchromosome CDS3092574 2751 + 0.416576
NA plu2321 hypothetical proteinchromosome CDS2726435 11727 + 0.481794
NA plu4188 hypothetical proteinchromosome CDS4901504 1548 - 0.347545
NA plu3263 hypothetical proteinchromosome CDS3865127 15651 - 0.521372
NA plu1213 hypothetical proteinchromosome CDS1398591 5010 + 0.445709
NA plu2217 hypothetical proteinchromosome CDS2605416 1266 + 0.42496
NA plu1884 hypothetical proteinchromosome CDS2246068 1566 + 0.464879
NA plu3535 hypothetical proteinchromosome CDS4155089 9858 - 0.42392
NA plu0765 hypothetical proteinchromosome CDS884051 264 - 0.32197
NA plu2670 hypothetical proteinchromosome CDS3124571 49104 - 0.52232
acpP plu2832 acyl carrier protein (cytosolic activating factor) (CAF)chromosome CDS3362880 237 - 0.396624
bioC plu1487 biotin synthesis proteinchromosome CDS1780394 768 + 0.454427
cpmC plu0184 CpmC protein involved in carbapenem biosynthesischromosome CDS194707 822 + 0.349148
crtI plu4342 phytoene dehydrogenase (phytoene desaturase)chromosome CDS5070119 1482 + 0.481781
cueO plu0845 Blue copper oxidase CueO precursorchromosome CDS976364 1545 + 0.476375
dltA plu4384 D-alanine-activating enzyme (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL)chromosome CDS5118630 1464 + 0.321038
dltC plu4381 D-alanine carrier protein DltCchromosome CDS5115942 225 + 0.328889
elbB plu4007 enhancing lycopene biosynthesis protein 2 (sigma cross-reacting protein 27A) (SCRP-27A)chromosome CDS4692171 654 - 0.397554
entA plu2727 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS3234194 747 - 0.420348
entB plu2728 isochorismatase (2,3-dihydro-2,3-dihydroxybenzoate synthetase)chromosome CDS3235008 654 - 0.353211
entE plu2729 2,3-dihydroxybenzoate--[carrier protein] ligase (enterobactin synthetase component E)chromosome CDS3235684 1620 - 0.396296
fabB plu3184 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS3745826 1215 - 0.454321
fabF plu2831 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS3361556 1251 - 0.471623
fabG plu2833 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS3363271 735 - 0.461224
fabG plu2344 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS2761480 771 - 0.516213
fadD plu2134 acyl-CoA synthasechromosome CDS2517873 1683 + 0.427213
hcaB plu2207 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2594591 843 + 0.475682
hcaF plu2205 3-phenylpropionate dioxygenase beta subunit (digoxigenin beta subunit)chromosome CDS2593732 543 + 0.429098
hpaB plu0975 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component (4-HPA 3-monooxygenase large component) (4-HPA 3-hydroxylase)chromosome CDS1155152 1563 - 0.46961
hpaG1 plu0990 hypothetical proteinchromosome CDS1173611 633 - 0.488152
hpaG2 plu0989 hypothetical proteinchromosome CDS1172853 762 - 0.485564
hpcG plu0983 2-oxo-hepta-3-ene-1,7-dioic acid hydratasechromosome CDS1166542 804 - 0.5
hutI plu3197 imidazolonepropionasechromosome CDS3761472 1248 - 0.453526
menE plu3069 O-succinylbenzoic acid--CoA ligasechromosome CDS3577479 1401 - 0.452534
menF plu3074 menaquinone-specific isochorismate synthasechromosome CDS3583269 1320 - 0.475
ngrA plu0992 4'-phosphopantetheinyl tranferasechromosome CDS1175153 744 - 0.403226
pncA plu2555 Pyrazinamidase/nicotinamidase [Includes: Pyrazinamidase (PZASE); Nicotinamidase (Nicotine deamidase)]chromosome CDS2999887 639 + 0.452269
prtA plu0655 Alkaline metalloprotease precursor PrtAchromosome CDS752825 1443 + 0.43659
rrmA plu2702 ribosomal RNA large subunit methyltransferase Achromosome CDS3203472 819 - 0.426129
smtA plu1636 S-adenosylmethionine-dependentmethyltransferasechromosome CDS1953543 780 + 0.425641
sufI plu3947 Protein SufI precursorchromosome CDS4631472 1422 - 0.468354
tehB plu3742 Tellurite resistance protein TehBchromosome CDS4414485 858 - 0.339161
ybbA plu3817 Probable ABC transporter ATP-binding protein YbbAchromosome CDS4486123 687 - 0.467249
ybbP plu3816 Probable ABC transporter permease protein YbbPchromosome CDS4483694 2433 - 0.475545
 
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, B67
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SC002 hypothetical proteinpSC138 CDS1068 393 + 0.613232
yusZ SC046 short chain dehydrogenasepSC138 CDS35635 864 + 0.439815
 
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SC2018 putative cytoplasmic proteinchromosome CDS2114698 327 - 0.409786
acp SC1144 acyl carrier proteinchromosome CDS1260171 237 + 0.476793
bioC SC0794 biotin biosynthesis; reaction prior to pimeloyl CoAchromosome CDS890976 756 + 0.596561
caiC SC0065 crotonobetaine/carnitine-CoA ligasechromosome CDS76645 1554 - 0.51094
cueO SC0168 putative multicopper oxidasechromosome CDS192642 1611 + 0.563625
dlhH SC3865 putative dienelactone hydrolase familychromosome CDS4108025 813 - 0.573186
entA SC0629 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS702475 756 + 0.583333
entB SC0628 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatasechromosome CDS701618 858 + 0.567599
entC SC0626 isochorismate synthasechromosome CDS698878 1107 + 0.585366
entD SC0615 enterochelin synthetase, component D (phoshpantetheinyltransferase)chromosome CDS683361 705 - 0.556028
entE SC0627 2,3-dihydroxybenzoate-AMP ligasechromosome CDS699994 1611 + 0.572936
entF SC0619 enterobactin synthetase, component F (nonribosomal peptide synthetase)chromosome CDS688015 3885 + 0.588932
eutM SC2461 putative detox protein in ethanolamine utilizationchromosome CDS2589814 291 - 0.61512
eutN SC2460 putative detox protein in ethanolamine utilizationchromosome CDS2589414 288 - 0.572917
faaH SC0376 putative fumarylacetoacetate (FAA) hydrolasechromosome CDS419375 879 + 0.499431
fabB SC2380 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2503032 1215 - 0.571193
fabF SC1145 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1260493 1242 + 0.550725
fabG SC1143 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1259281 735 + 0.50068
fadD SC1811 acyl-CoA synthasechromosome CDS1930394 1542 - 0.523995
fst SC2194 putative flutathione S-transferasechromosome CDS2296146 702 - 0.545584
gdo SC2195 putative 1,2-dioxygenase proteinchromosome CDS2296863 1038 - 0.565511
hpaB SC1049 4-hydroxyphenylacetate catabolismchromosome CDS1165150 1563 - 0.526551
hpaG SC1051 4-hydroxyphenylacetate catabolismchromosome CDS1167645 1290 + 0.558915
hpaH SC1055 4-hydroxyphenylacetate catabolismchromosome CDS1171773 804 + 0.588308
hutI SC0785 imidazolonepropionasechromosome CDS880429 1263 + 0.581948
iacp SC2813 acyl carrier proteinchromosome CDS2977940 249 - 0.389558
idnO SC4339 gluconate 5-dehydrogenasechromosome CDS4641150 765 - 0.534641
kduD SC2956 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3137265 762 - 0.515748
menE SC2305 O-succinylbenzoic acid--CoA ligasechromosome CDS2425952 1368 - 0.597953
menF SC2310 menaquinone-specific isochorismate synthasechromosome CDS2431661 1296 - 0.568673
pduA SC2046 Propanediol utilization: polyhedral bodieschromosome CDS2138585 285 + 0.536842
pduC SC2048 Propanediol utilization: dehydratase, large subunitchromosome CDS2139697 1665 + 0.568168
pduE SC2050 Propanediol utilization: dehydratase, small subunitchromosome CDS2142061 522 + 0.570881
pduJ SC2053 Propanediol utilization: polyhedral bodieschromosome CDS2144789 276 + 0.557971
pduK SC2054 Propanediol utilization: polyhedral bodieschromosome CDS2145068 483 + 0.554865
pduL SC2055 Propanediol utilizationchromosome CDS2145550 633 + 0.598736
pduN SC2057 Propanediol utilization: polyhedral bodieschromosome CDS2146674 276 + 0.608696
pduT SC2062 Propanediol utilization: polyhedral bodieschromosome CDS2151839 330 + 0.545455
pduX SC2067 Propanediol utilizationchromosome CDS2154006 903 + 0.55371
pncA SC1315 nicotinamidase/ pyrazinamidasechromosome CDS1412134 624 - 0.570513
rrmA SC1829 23S rRNA m1G745 methyltransferasechromosome CDS1947884 810 - 0.561728
slsA SC3682 putative inner membrane proteinchromosome CDS3898353 681 + 0.522761
smtA SC0949 S-adenosylmethionine-dependentmethyltransferasechromosome CDS1062668 804 + 0.549751
srlD SC2768 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS2934638 780 + 0.547436
stcD SC2164 putative outer membrane lipoproteinchromosome CDS2265349 1008 - 0.411706
sufI SC3116 suppressor of ftsI, putative periplasmic proteinchromosome CDS3295229 1413 - 0.585987
tehB SC1605 paral putative methyltransferase; tellurite resistancechromosome CDS1711518 597 - 0.499162
ucpA SC2444 short chain dehydrogenasechromosome CDS2572350 792 - 0.537879
yafE SC0255 putative methyltransferase in menaquinone/biotin biosynthesischromosome CDS295006 771 + 0.520104
yafS SC0258 putative SAM-dependent methyltransferasechromosome CDS298061 723 + 0.510373
ybbA SC0548 putative ABC superfamily (atp_bind) transporterchromosome CDS610796 687 + 0.590975
ybbO SC0546 short chain dehydrogenasechromosome CDS609286 771 - 0.546044
ybbP SC0549 putative inner membrane proteinchromosome CDS611479 2415 + 0.580538
ybcY SC1634 putative SAM-dependent methyltransferasechromosome CDS1742046 663 + 0.466063
ybdB SC0630 putative protein PaaI, possibly involved in aromatic compounds catabolismchromosome CDS703233 414 + 0.603865
ycaC SC0904 Homolog of slsA in STMchromosome CDS1011610 678 - 0.541298
ycgM SC1805 putative Fumarylacetoacetate (FAA) hydrolase familychromosome CDS1926132 660 - 0.533333
yciK SC1714 short chain dehydrogenasechromosome CDS1827501 762 + 0.566929
yczH SC4361 putative dienelactone hydrolasechromosome CDS4667706 675 - 0.536296
ydcO SC1603 putative benzoate membrane transport proteinchromosome CDS1709394 1239 + 0.567393
ydiD SC1369 hypothetical proteinchromosome CDS1466297 1686 - 0.527877
ydiI SC1386 putative protein PaaI, possibly involved in aromatic compounds catabolismchromosome CDS1486979 411 + 0.569343
yecD SC1910 putative isochorismatasechromosome CDS2019789 567 + 0.555556
yecO SC1913 putative SAM-dependent methyltransferasechromosome CDS2021659 744 + 0.530914
yecP SC1914 putative enzymechromosome CDS2022399 972 + 0.552469
yghA SC3099 oxidoreductasechromosome CDS3278037 885 + 0.564972
yhbL SC3265 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS3444354 654 - 0.568807
yhiQ SC3522 putative SAM-dependent methyltransferasechromosome CDS3717306 759 - 0.620553
yigI SC3855 putative protein PaaI, possibly involved in aromatic compounds catabolismchromosome CDS4095233 486 - 0.563786
yjcS SC1867 putative hydrolasechromosome CDS1978287 1980 - 0.496465
yjgI SC1669 oxidoreductasechromosome CDS1781129 714 + 0.571429
yjhP SC4356 putative SAM-dependent methyltransferasechromosome CDS4662789 1632 - 0.546569
yohF SC2187 oxidoreductasechromosome CDS2290516 762 - 0.549869
yojI SC2267 putative ABC-type multidrug/protein/lipid transport system, ATPase componentchromosome CDS2375046 1644 - 0.551095
yrbC SC3248 putative ABC superfamily (atp&memb), transport proteinchromosome CDS3431688 636 - 0.531447
yrbD SC3249 putative ABC superfamily (bind_prot) transport proteinchromosome CDS3432342 552 - 0.512681
yrbE SC3250 putative ABC superfamily (membr) transport proteinchromosome CDS3432898 783 - 0.57599
yrbF SC3251 putative ABC superfamily (atp_bind) transport proteinchromosome CDS3433688 813 - 0.580566
 
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPA1489 hypothetical proteinchromosome CDS1562643 354 - 0.581921
NA SPA0673 putative gentisate 1,2-dioxygenasechromosome CDS755875 1038 + 0.565511
NA SPA4325 hypothetical proteinchromosome CDS4499988 666 - 0.543544
NA SPA0862 hypothetical proteinchromosome CDS952540 327 + 0.412844
NA SPA0674 FAA-hydrolase-family proteinchromosome CDS756928 702 + 0.54416
NA SPA1848 hypothetical proteinchromosome CDS1924179 678 + 0.538348
acpP SPA1655 acyl carrier proteinchromosome CDS1719842 237 - 0.476793
bioC SPA1956 biotin synthesis protein BioCchromosome CDS2036967 756 - 0.597884
caiC SPA0072 crotonobetaine/carnitine-CoA ligasechromosome CDS82318 1554 - 0.502574
entA SPA2136 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS2221816 756 - 0.583333
entB SPA2137 isochorismatasechromosome CDS2222571 858 - 0.564103
entC SPA2139 isochorismate synthasechromosome CDS2225062 1170 - 0.587179
entD SPA2150 enterobactin synthetase component Dchromosome CDS2240981 705 + 0.558865
entE SPA2138 2,3-dihydroxybenzoate-AMP ligasechromosome CDS2223442 1614 - 0.574969
entF SPA2146 enterobactin synthetase component Fchromosome CDS2233146 3885 - 0.591506
eutK SPA0413 ethanolamine utilization protein EutKchromosome CDS484221 495 + 0.612121
eutM SPA0404 putative ethanolamine utilization protein EutNchromosome CDS474896 348 + 0.577586
eutN SPA0403 putative ethanolamine utilization protein EutNchromosome CDS474553 291 + 0.604811
fabB SPA0486 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS558073 1215 + 0.567901
fabF SPA1654 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1718515 1242 - 0.550725
fabG SPA1656 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1720234 735 - 0.50068
fadD SPA1055 acyl-CoA synthasechromosome CDS1125229 1686 + 0.520759
hpaB SPA1751 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS1811291 1308 + 0.537462
hpcG SPA1745 2-oxo-hepta-3-ene-1,7-dioic acid hydratasechromosome CDS1805163 804 - 0.59204
hutI SPA1965 imidazolonepropionasechromosome CDS2047007 1224 - 0.578431
idnO SPA4283 gluconate 5-dehydrogenasechromosome CDS4457205 765 - 0.530719
kduD SPA2884 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2995204 762 - 0.523622
menE SPA0558 O-succinylbenzoic acid--CoA ligasechromosome CDS632251 1368 + 0.605263
menF SPA0553 menaquinone-specific isochorismate synthasechromosome CDS626614 1296 + 0.56713
nhoA SPA1286 N-hydroxyarylamine O-acetyltransferasechromosome CDS1361005 846 + 0.520095
pduA SPA0833 putative propanediol utilization protein PduAchromosome CDS928696 285 - 0.533333
pduC SPA0831 glycerol dehydratase large subunitchromosome CDS926204 1665 - 0.568769
pduE SPA0829 diol dehydratase small subunitchromosome CDS924983 522 - 0.563218
pduJ SPA0826 putative propanediol utilization protein PduJchromosome CDS922310 276 - 0.557971
pduK SPA0825 putative propanediol utilization protein PduKchromosome CDS921824 483 - 0.554865
pduL SPA0824 hypothetical proteinchromosome CDS921192 633 - 0.589257
pduN SPA0822 Propanediol utilization: polyhedral bodieschromosome CDS920425 276 - 0.619565
pduT SPA0817 putative propanediol utilization protein PduTchromosome CDS914987 555 - 0.585586
pduX SPA0813 hypothetical proteinchromosome CDS912021 903 - 0.55371
pncA SPA1551 pyrazinamidase/nicotinamidasechromosome CDS1627069 657 + 0.57382
rrmA SPA1038 rRNA guanine-N1-methyltransferasechromosome CDS1108616 810 + 0.562963
sipF SPA2739 acyl carrier proteinchromosome CDS2838958 249 - 0.381526
slsA SPA3611 hypothetical proteinchromosome CDS3747889 681 + 0.524229
smtA SPA1807 SmtA proteinchromosome CDS1874281 804 - 0.548507
srlD SPA2693 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS2795647 780 + 0.552564
sufI SPA3041 SufI proteinchromosome CDS3145047 1413 - 0.58811
tehB SPA1261 tellurite resistance protein TehBchromosome CDS1332007 597 + 0.500838
yacK SPA0171 possible multicopper oxidase precursorchromosome CDS198809 1611 + 0.562384
yafE SPA2510 putative methyltransferasechromosome CDS2609159 771 - 0.522698
yafS SPA2507 hypothetical proteinchromosome CDS2606152 723 - 0.510373
ybbA SPA2215 hypothetical ABC transporter ATP-binding proteinchromosome CDS2306120 687 - 0.58952
ybbO SPA2217 short chain dehydrogenasechromosome CDS2307546 771 + 0.546044
ybbP SPA2214 hypothetical proteinchromosome CDS2303709 2415 - 0.587992
ybdB SPA2135 hypothetical proteinchromosome CDS2221400 414 - 0.601449
ycgM SPA1061 putative hydrolasechromosome CDS1130518 660 + 0.531818
yciK SPA1159 short chain dehydrogenasechromosome CDS1227212 762 - 0.565617
yecD SPA0967 putative hydrolasechromosome CDS1040011 567 - 0.559083
yecO SPA0964 hypothetical proteinchromosome CDS1037964 744 - 0.532258
yecP SPA0963 hypothetical proteinchromosome CDS1036996 972 - 0.546296
yfeF SPA0421 short chain dehydrogenasechromosome CDS490755 792 + 0.541667
yghA SPA3025 oxidoreductasechromosome CDS3127340 885 + 0.564972
yhbL SPA3194 hypothetical proteinchromosome CDS3297075 654 - 0.568807
yhiQ SPA3450 hypothetical proteinchromosome CDS3559847 759 - 0.628458
yigI SPA3797 hypothetical proteinchromosome CDS3939210 468 - 0.566239
yjcS SPA1006 putative hydrolasechromosome CDS1078444 1980 + 0.493939
yjgI SPA1209 oxidoreductasechromosome CDS1278060 714 - 0.57563
yjhP SPA4320 hypothetical proteinchromosome CDS4495028 1626 - 0.549815
yohF SPA0680 oxidoreductasechromosome CDS762499 762 + 0.541995
yojI SPA0601 putative ABC transporter ATP-binding proteinchromosome CDS682863 1644 + 0.545012
yrbC SPA3177 possible exported proteinchromosome CDS3284413 636 - 0.533019
yrbD SPA3178 possible exported proteinchromosome CDS3285067 552 - 0.509058
yrbE SPA3179 hypothetical proteinchromosome CDS3285623 783 - 0.578544
yrbF SPA3180 possible ABC-transport protein, ATP-binding componentchromosome CDS3286413 813 - 0.583026
ysgA SPA3808 putative hydrolasechromosome CDS3952012 813 - 0.568266
 
Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t2603 hypothetical proteinchromosome CDS2679382 723 - 0.504841
NA t4550 hypothetical proteinchromosome CDS4702025 1629 - 0.547575
NA t1579 oxidoreductasechromosome CDS1638675 714 + 0.570028
NA t4342 Putative methyltransferasechromosome CDS4492231 891 + 0.538721
NA t3227 possible exported proteinchromosome CDS3316967 636 - 0.531447
NA t1234 hypothetical proteinchromosome CDS1304257 393 + 0.582697
NA t3229 hypothetical proteinchromosome CDS3318177 783 - 0.578544
NA t1630 short chain dehydrogenasechromosome CDS1689844 762 + 0.566929
NA t4555 hypothetical proteinchromosome CDS4706975 666 - 0.537538
NA t0678 FAA-hydrolase-family proteinchromosome CDS764021 702 + 0.54416
NA t0971 hypothetical proteinchromosome CDS1060733 972 - 0.548354
NA t0866 hypothetical proteinchromosome CDS953913 327 + 0.412844
NA t3228 possible exported proteinchromosome CDS3317621 552 - 0.514493
NA t4356 hypothetical proteinchromosome CDS4509837 1590 + 0.476101
NA t3244 hypothetical proteinchromosome CDS3329629 654 - 0.568807
NA t3230 possible ABC-transport protein, ATP-binding componentchromosome CDS3318967 813 - 0.580566
NA t1065 putative hydrolasechromosome CDS1147913 660 + 0.531818
NA t2352 hypothetical proteinchromosome CDS2418341 2415 - 0.584265
NA t3077 oxidoreductasechromosome CDS3159757 885 + 0.564972
NA t3923 hypothetical proteinchromosome CDS4060880 759 + 0.627141
NA t0972 hypothetical proteinchromosome CDS1061701 744 - 0.532258
NA t1515 putative benzoate membrane transport proteinchromosome CDS1571734 1239 + 0.569814
NA t1541 hypothetical proteinchromosome CDS1596603 438 + 0.481735
NA t1492 N-hydroxyarylamine O-acetyltransferasechromosome CDS1544005 846 - 0.521277
NA t1983 hypothetical proteinchromosome CDS2042184 678 + 0.536873
NA t1914 putative methyltransferasechromosome CDS1961813 474 - 0.521097
NA t0677 putative gentisate 1,2-dioxygenasechromosome CDS762968 1038 + 0.567437
acpP t1724 acyl carrier proteinchromosome CDS1791164 237 - 0.476793
bioC t2091 biotin synthesis protein BioCchromosome CDS2153378 756 - 0.601852
caiC t0072 crotonobetaine/carnitine-CoA ligasechromosome CDS82372 1554 - 0.51094
entA t2270 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS2336307 756 - 0.589947
entB t2271 isochorismatasechromosome CDS2337062 858 - 0.55711
entC t2273 isochorismate synthasechromosome CDS2339553 1170 - 0.588889
entD t2284 enterobactin synthetase component Dchromosome CDS2355471 705 + 0.561702
entE t2272 2,3-dihydroxybenzoate-AMP ligasechromosome CDS2337933 1614 - 0.578686
entF t2280 enterobactin synthetase component Fchromosome CDS2347636 3885 - 0.589447
eutK t0403 ethanolamine utilization protein EutKchromosome CDS478843 495 + 0.608081
eutN t0394 putative ethanolamine utilization protein EutNchromosome CDS468997 690 + 0.591304
fabB t0486 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS559857 1215 + 0.572839
fabF t1723 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1789837 1242 - 0.549919
fabG t1725 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1791556 735 - 0.502041
fadD t1059 acyl-CoA synthasechromosome CDS1142624 1686 + 0.523725
hpaB t1820 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS1883324 1308 + 0.534404
hpaG t1818 2-hydroxyhepta-2,4-diene-1,7-dioate decarboxylasechromosome CDS1881214 1290 - 0.560465
hpcG t1814 2-oxo-hepta-3-ene-1,7-dioic acid hydratasechromosome CDS1877562 804 - 0.589552
hutI t2100 imidazolonepropionasechromosome CDS2163429 1224 - 0.587418
kduD t2927 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3020422 762 - 0.518373
menE t0558 O-succinylbenzoic acid--CoA ligasechromosome CDS634081 1368 + 0.60307
menF t0553 menaquinone-specific isochorismate synthasechromosome CDS628444 1296 + 0.568673
pduA t0836 putative propanediol utilization protein PduAchromosome CDS930221 285 - 0.536842
pduC t0834 glycerol dehydratase large subunitchromosome CDS927729 1665 - 0.568769
pduE t0832 diol dehydratase small subunitchromosome CDS926508 522 - 0.563218
pduJ t0829 putative propanediol utilization protein PduJchromosome CDS923834 276 - 0.554348
pduK t0828 putative propanediol utilization protein PduKchromosome CDS923348 483 - 0.563147
pduL t0827 hypothetical proteinchromosome CDS922716 633 - 0.584518
pduT t0820 putative propanediol utilization protein PduTchromosome CDS916506 555 - 0.581982
pduX t0816 hypothetical proteinchromosome CDS913540 903 - 0.557032
pncA t1172 pyrazinamidase/nicotinamidasechromosome CDS1238993 657 - 0.57382
rrmA t1043 rRNA guanine-N1-methyltransferasechromosome CDS1126011 810 + 0.560494
sipF t2783 acyl carrier proteinchromosome CDS2862279 249 - 0.381526
slsA t3757 hypothetical proteinchromosome CDS3873860 681 - 0.527166
smtA t1943 SmtA proteinchromosome CDS1992357 804 - 0.557214
srlD t2736 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS2818970 780 + 0.551282
sufI t3093 SufI proteinchromosome CDS3177465 1413 - 0.588818
tehB t1517 tellurite resistance protein TehBchromosome CDS1573850 597 - 0.502513
yacK t0173 possible multicopper oxidase precursorchromosome CDS198711 1611 + 0.562384
yafE t2606 putative methyltransferasechromosome CDS2682389 771 - 0.522698
ybbA t2354 hypothetical ABC transporter ATP-binding proteinchromosome CDS2420752 687 - 0.586608
ybbO t2355 short chain dehydrogenasechromosome CDS2422178 771 + 0.551232
ybdB t2269 hypothetical proteinchromosome CDS2335891 414 - 0.596618
yecD t0975 putative hydrolasechromosome CDS1063748 567 - 0.560847
yfeF t0413 short chain dehydrogenasechromosome CDS487106 792 + 0.540404
yigI t3341 hypothetical proteinchromosome CDS3443693 468 + 0.568376
yjcS t1012 putative hydrolasechromosome CDS1095911 1980 + 0.49596
yjhP t4343 hypothetical proteinchromosome CDS4493121 747 + 0.542169
yohF t0684 oxidoreductasechromosome CDS769591 762 + 0.548556
yojI t0601 putative ABC transporter ATP-binding proteinchromosome CDS685357 1644 + 0.55292
ysgA t3330 putative hydrolasechromosome CDS3430556 813 + 0.568266
 
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STY1389 oxidoreductasechromosome CDS1341794 714 - 0.570028
NA STY3491 hypothetical proteinchromosome CDS3332682 783 - 0.578544
NA STY1458 putative benzoate membrane transport proteinchromosome CDS1408209 1239 - 0.569814
NA STY2213 hypothetical proteinchromosome CDS2049689 327 - 0.412844
NA STY3330 oxidoreductasechromosome CDS3174262 885 + 0.564972
NA STY2408 putative gentisate 1,2-dioxygenasechromosome CDS2239932 1038 - 0.568401
NA STY3506 hypothetical proteinchromosome CDS3344134 654 - 0.568807
NA STY2407 FAA-hydrolase-family proteinchromosome CDS2239215 702 - 0.54416
NA HCM2.0016c putative porphyrin biosynthetic proteinpHCM2 CDS11783 1236 - 0.530744
NA STY4649 Putative methyltransferasechromosome CDS4508645 891 + 0.538721
NA STY2113 hypothetical proteinchromosome CDS1964037 744 + 0.532258
NA STY3489 possible exported proteinchromosome CDS3331472 636 - 0.531447
NA STY3492 possible ABC-transport protein, ATP-binding componentchromosome CDS3333472 813 - 0.580566
NA STY1757 hypothetical proteinchromosome CDS1676481 393 - 0.582697
NA STY1433 hypothetical proteinchromosome CDS1384141 438 - 0.481735
NA STY3490 possible exported proteinchromosome CDS3332126 552 - 0.514493
NA STY4210 hypothetical proteinchromosome CDS4076233 759 + 0.627141
NA STY0554 hypothetical proteinchromosome CDS560346 2415 + 0.584265
NA STY2114 hypothetical proteinchromosome CDS1964777 972 + 0.548354
NA STY4665 hypothetical proteinchromosome CDS4527028 1590 + 0.476101
NA STY1333 short chain dehydrogenasechromosome CDS1290578 762 - 0.566929
NA STY0948 hypothetical proteinchromosome CDS938216 678 - 0.536873
NA STY1483 N-hydroxyarylamine O-acetyltransferasechromosome CDS1436331 846 + 0.521277
NA STY1026 putative methyltransferasechromosome CDS1018791 474 + 0.521097
NA STY4861 hypothetical proteinchromosome CDS4724051 666 - 0.537538
NA STY0283 hypothetical proteinchromosome CDS299977 723 + 0.504841
NA STY1942 putative hydrolasechromosome CDS1832560 660 - 0.533333
NA STY4856 hypothetical proteinchromosome CDS4719101 1629 - 0.547575
acpP STY1235 acyl carrier proteinchromosome CDS1189783 237 + 0.476793
bioC STY0829 biotin synthesis protein BioCchromosome CDS826944 756 + 0.601852
caiC STY0081 crotonobetaine/carnitine-CoA ligasechromosome CDS82381 1554 - 0.51094
entA STY0642 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS644039 756 + 0.589947
entB STY0641 isochorismatasechromosome CDS643182 858 + 0.55711
entC STY0639 isochorismate synthasechromosome CDS640379 1170 + 0.588889
entD STY0627 enterobactin synthetase component Dchromosome CDS624926 705 - 0.561702
entE STY0640 2,3-dihydroxybenzoate-AMP ligasechromosome CDS641555 1614 + 0.578686
entF STY0631 enterobactin synthetase component Fchromosome CDS629581 3885 + 0.589447
eutK STY2692 ethanolamine utilization protein EutKchromosome CDS2525375 495 - 0.608081
eutN STY2701 putative ethanolamine utilization protein EutNchromosome CDS2535026 690 - 0.591304
fabB STY2609 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2443641 1215 - 0.572839
fabF STY1236 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1190105 1242 + 0.549919
fabG STY1234 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1188893 735 + 0.502041
fadD STY1948 acyl-CoA synthasechromosome CDS1836823 1686 - 0.523132
hpaB STY1131 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS1096182 1308 - 0.534404
hpaG STY1134 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerasechromosome CDS1098310 1290 + 0.560465
hpcG STY1139 2-oxo-hepta-3-ene-1,7-dioic acid hydratasechromosome CDS1102448 804 + 0.589552
hutI STY0820 imidazolonepropionasechromosome CDS816437 1224 + 0.587418
kduD STY3162 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3034527 762 - 0.518373
menE STY2535 O-succinylbenzoic acid--CoA ligasechromosome CDS2369264 1368 - 0.60307
menF STY2541 menaquinone-specific isochorismate synthasechromosome CDS2374973 1296 - 0.568673
pduA STY2243 putative propanediol utilization protein PduAchromosome CDS2073423 285 + 0.536842
pduC STY2245 glycerol dehydratase large subunitchromosome CDS2074535 1665 + 0.568769
pduE STY2247 diol dehydratase small subunitchromosome CDS2076899 522 + 0.563218
pduJ STY2250 putative propanediol utilization protein PduJchromosome CDS2079819 276 + 0.554348
pduK STY2251 putative propanediol utilization protein PduKchromosome CDS2080098 483 + 0.563147
pduL STY2252 hypothetical proteinchromosome CDS2080580 633 + 0.584518
pduT STY2259 putative propanediol utilization protein PduTchromosome CDS2086868 555 + 0.581982
pduX STY2263 hypothetical proteinchromosome CDS2089486 903 + 0.55814
pncA STY1821 pyrazinamidase/nicotinamidasechromosome CDS1741482 657 + 0.57382
rrmA STY1964 rRNA guanine-N1-methyltransferasechromosome CDS1854312 810 - 0.560494
sipF STY3004 acyl carrier proteinchromosome CDS2876422 249 - 0.381526
slsA STY4025 hypothetical proteinchromosome CDS3888370 681 - 0.527166
smtA STY0993 SmtA proteinchromosome CDS987917 804 + 0.557214
srlD STY2956 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS2833113 780 + 0.551282
sufI STY3349 SufI proteinchromosome CDS3191970 1413 - 0.588818
tehB STY1456 tellurite resistance protein TehBchromosome CDS1406735 597 + 0.502513
yacK STY0190 possible multicopper oxidase precursorchromosome CDS198720 1611 + 0.562384
yafE STY0280 putative methyltransferasechromosome CDS296922 771 + 0.522698
ybbA STY0553 hypothetical ABC transporter ATP-binding proteinchromosome CDS559663 687 + 0.586608
ybbO STY0551 short chain dehydrogenasechromosome CDS558153 771 - 0.551232
ybdB STY0643 hypothetical proteinchromosome CDS644797 414 + 0.596618
yecD STY2110 putative hydrolasechromosome CDS1962167 567 + 0.560847
yfeF STY2682 short chain dehydrogenasechromosome CDS2516815 792 - 0.540404
yigI STY3603 hypothetical proteinchromosome CDS3458035 468 + 0.568376
yjcS STY2004 putative hydrolasechromosome CDS1883242 1980 - 0.49596
yjhP STY4650 hypothetical proteinchromosome CDS4509535 747 + 0.542169
yohF STY2401 oxidoreductasechromosome CDS2233585 762 - 0.547244
yojI STY2489 putative ABC transporter ATP-binding proteinchromosome CDS2317713 1644 - 0.55292
ysgA STY3592 putative hydrolasechromosome CDS3444898 813 + 0.567036
 
Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SBO_1677 hypothetical proteinchromosome CDS1662978 1353 - 0.501109
NA SBO_0952 unknown protein encoded within prophagechromosome CDS983435 657 + 0.404871
NA SBO_1444 hypothetical proteinchromosome CDS1422663 411 + 0.508516
NA SBO_3844 putative enzymechromosome CDS3868793 879 - 0.531286
NA SBO_1166 putative isomerasechromosome CDS1166249 660 + 0.518182
NA SBO_2463 hypothetical proteinchromosome CDS2453541 507 - 0.583826
NA SBO_1428 putative IS1 encoded proteinchromosome CDS1404948 333 - 0.438438
NA SBO_1869 putative sensor-type regulatorchromosome CDS1851863 1929 - 0.512701
NA SBO_4241 hypothetical proteinchromosome CDS4296586 927 + 0.518878
NA SBO_1190 hypothetical proteinchromosome CDS1185518 288 + 0.510417
acpP SBO_1969 acyl carrier proteinchromosome CDS1943482 237 - 0.481013
bioC SBO_0664 BioCchromosome CDS677544 756 + 0.564815
cchA SBO_2472 detox proteinchromosome CDS2460676 336 - 0.571429
cchB SBO_2471 detox proteinchromosome CDS2460282 288 - 0.53125
entA SBO_0457 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS477028 747 + 0.576975
entB SBO_0456 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS476171 858 + 0.551282
entC SBO_0454 isochorismate hydroxymutase 2, enterochelin biosynthesischromosome CDS473362 1176 + 0.561224
entD SBO_0443 enterochelin synthetase, component Dchromosome CDS457938 630 - 0.495238
entE SBO_0455 2,3-dihydroxybenzoate-AMP ligasechromosome CDS474547 1611 + 0.563625
entF SBO_0447 ATP-dependent serine activating enzymechromosome CDS462635 3882 + 0.562081
fabB SBO_2360 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2349335 1221 - 0.561835
fabF SBO_1968 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1942153 1242 - 0.532206
fabG SBO_1970 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1943929 735 - 0.514286
fadD SBO_1283 acyl-CoA synthetasechromosome CDS1271842 1686 + 0.511269
hcaA2 SBO_2563 small terminal subunit of phenylpropionate dioxygenasechromosome CDS2565598 519 + 0.520231
hcaB SBO_2565 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2566433 813 + 0.563346
hdhA SBO_1517 NAD-dependent 7alpha-hydroxysteroid dehydrogenasechromosome CDS1494183 768 + 0.47526
hpaB SBO_4404 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS4457553 1563 - 0.541267
hpaG SBO_4412 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerasechromosome CDS4466232 1290 - 0.556589
hpaH SBO_4408 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS4462765 651 - 0.582181
iucA SBO_4337 siderophore biosynthesis proteinchromosome CDS4386545 1782 + 0.537037
iucC SBO_4339 siderophore biosynthesis proteinchromosome CDS4389274 1743 + 0.545611
iucD SBO_4340 lysine:N6-hydroxylasechromosome CDS4391013 1338 + 0.466368
kduD SBO_2734 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2747547 762 - 0.520997
menE SBO_2297 o-succinylbenzoate-CoA ligasechromosome CDS2285818 1356 - 0.548673
menF SBO_2302 isochorismate hydroxymutase 2chromosome CDS2291518 1071 - 0.537815
smtA SBO_2209 S-adenosylmethionine-dependentmethyltransferasechromosome CDS2189492 786 + 0.516539
sorD SBO_4048 putative sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4091055 807 - 0.505576
srlD SBO_2813 glucitol (sorbitol)-6-phosphate dehydrogenasechromosome CDS2823329 780 - 0.525641
sufI SBO_2879 suppressor of ftsIchromosome CDS2882056 1413 - 0.564048
tauD SBO_0262 taurine dioxygenasechromosome CDS276087 852 + 0.543427
tehB SBO_1657 tellurite resistancechromosome CDS1639923 594 - 0.452862
ucpA SBO_2451 putative oxidoreductasechromosome CDS2442181 858 - 0.537296
yacK SBO_0112 hypothetical proteinchromosome CDS125437 1551 + 0.539007
yafE SBO_0199 putative biotin synthesis proteinchromosome CDS217880 624 + 0.496795
yafS SBO_0202 hypothetical proteinchromosome CDS220768 726 + 0.49449
ybbA SBO_0396 putative ATP-binding component of a transport systemchromosome CDS413554 687 + 0.56623
ybbO SBO_0395 putative oxidoreductasechromosome CDS412161 810 - 0.539506
ybcY SBO_1027 hypothetical proteinchromosome CDS1046279 432 - 0.405093
ybdB SBO_0458 hypothetical proteinchromosome CDS477777 414 + 0.582126
ycaC SBO_0986 hypothetical proteinchromosome CDS1008573 582 - 0.465636
yciK SBO_1795 putative oxidoreductasechromosome CDS1774591 759 + 0.523057
ydgB SBO_1530 putative oxidoreductasechromosome CDS1510504 723 - 0.51314
ydjB SBO_1319 hypothetical proteinchromosome CDS1303184 660 - 0.521212
yebH SBO_1235 putative enzymechromosome CDS1231468 810 - 0.518519
yecD SBO_1192 hypothetical proteinchromosome CDS1187232 336 + 0.520833
yecO SBO_1132 hypothetical proteinchromosome CDS1135566 744 - 0.502688
yecP SBO_1131 putative enzymechromosome CDS1134598 972 - 0.522634
yeiN SBO_2161 hypothetical proteinchromosome CDS2137924 891 - 0.501683
yghA SBO_2997 putative oxidoreductasechromosome CDS3000624 885 + 0.544633
yhbL SBO_3173 sigma cross-reacting protein 27Achromosome CDS3184669 663 + 0.524887
yhiQ SBO_3495 hypothetical proteinchromosome CDS3487340 753 - 0.586985
yigI SBO_3832 hypothetical proteinchromosome CDS3854364 480 - 0.522917
yjcS SBO_4115 hypothetical proteinchromosome CDS4160426 1998 - 0.51952
yjgI SBO_4198 putative oxidoreductasechromosome CDS4248347 714 + 0.543417
yohF SBO_1007 putative oxidoreductasechromosome CDS1025466 762 + 0.553806
yojI SBO_2096 putative ATP-binding component of a transport systemchromosome CDS2077005 1644 + 0.527981
yrbC SBO_3190 hypothetical proteinchromosome CDS3197246 636 + 0.525157
yrbD SBO_3189 hypothetical proteinchromosome CDS3196676 552 + 0.494565
yrbE SBO_3188 hypothetical proteinchromosome CDS3195889 783 + 0.551724
 
Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SDY_2636 hypothetical proteinchromosome CDS2428320 507 - 0.573964
NA SDY_0420 hypothetical proteinchromosome CDS400936 1335 - 0.597004
NA SDY_1154 hypothetical proteinchromosome CDS1073829 255 + 0.517647
NA SDY_1212 putative isomerasechromosome CDS1121164 660 + 0.525758
NA SDY_1060 hypothetical proteinchromosome CDS996338 432 + 0.405093
NA SDY_1239 hypothetical proteinchromosome CDS1145679 414 - 0.528986
NA SDY_1779 hypothetical proteinchromosome CDS1618679 1758 - 0.508532
NA SDY_3913 putative enzymechromosome CDS3644050 870 + 0.532184
NA SDY_1237 hypothetical proteinchromosome CDS1144506 582 - 0.530928
NA SDY_3090 hypothetical proteinchromosome CDS2865287 1623 - 0.529883
NA SDY_1249 hypothetical proteinchromosome CDS1153779 432 + 0.511574
NA SDY_1674 hypothetical proteinchromosome CDS1534642 411 - 0.510949
NA SDY_3629 putative beta-ketoacyl-ACP synthasechromosome CDS3363131 1230 + 0.55122
acp SDY_P162 AcppSD1_197 CDS129030 237 - 0.299578
acpP SDY_2056 acyl carrier proteinchromosome CDS1868138 237 - 0.481013
bioC SDY_0829 biotin biosynthesis proteinchromosome CDS773471 756 - 0.564815
caiC SDY_0059 probable crotonobetaine/carnitine-CoA ligasechromosome CDS55024 1569 - 0.506055
entA SDY_0527 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS513759 747 + 0.575636
entB SDY_0526 2,3-dihydro-2,3-dihydroxybenzoate synthetasechromosome CDS512902 858 + 0.544289
entC SDY_0524 isochorismate hydroxymutase 2chromosome CDS510093 1176 + 0.562075
entD SDY_0511 enterochelin synthetase, component Dchromosome CDS493991 630 - 0.487302
entE SDY_0525 2,3-dihydroxybenzoate-AMP ligasechromosome CDS511278 1611 + 0.559901
entF SDY_0515 ATP-dependent serine activating enzymechromosome CDS498689 3882 + 0.561566
fabB SDY_2522 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2320477 1221 - 0.562654
fabF SDY_2055 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1866811 1242 - 0.532206
fabG SDY_2057 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1868585 735 - 0.512925
fadD SDY_1709 acyl-CoA synthetasechromosome CDS1561171 1686 - 0.513049
hdhA SDY_1838 NAD-dependent 7alpha-hydroxysteroid dehydrogenasechromosome CDS1674498 768 - 0.473958
menE SDY_2456 o-succinylbenzoate-CoA ligasechromosome CDS2256592 1356 - 0.561209
menF SDY_2461 isochorismate hydroxymutase 2, menaquinone biosynthesischromosome CDS2262292 1071 - 0.533147
smtA SDY_2337 S-adenosylmethionine-dependentmethyltransferasechromosome CDS2128881 786 - 0.517812
srlD SDY_2902 glucitol-6-phosphate dehydrogenasechromosome CDS2682458 780 + 0.528205
sufI SDY_3220 suppressor of ftsIchromosome CDS2983361 1413 + 0.562633
tauD SDY_0502 taurine dioxygenasechromosome CDS486961 852 - 0.538732
tehB SDY_1747 tellurite resistance proteinchromosome CDS1591269 594 - 0.464646
ucpA SDY_2622 putative oxidoreductasechromosome CDS2416333 858 - 0.532634
yacK SDY_0030 hypothetical proteinchromosome CDS27255 1551 + 0.539652
yafE SDY_0229 putative biotin synthesis proteinchromosome CDS233151 564 + 0.469858
yafS SDY_0232 hypothetical proteinchromosome CDS235963 741 + 0.489879
ybbA SDY_0405 putative ATP-binding component of a transport systemchromosome CDS389100 687 - 0.567686
ybbO SDY_0406 putative oxidoreductasechromosome CDS390370 810 + 0.540741
ybdB SDY_0528 hypothetical proteinchromosome CDS514508 414 + 0.582126
ycaC SDY_2364 hypothetical proteinchromosome CDS2160996 456 + 0.453947
yciK SDY_1341 putative oxidoreductasechromosome CDS1238903 759 - 0.520422
ydgB SDY_1547 putative oxidoreductasechromosome CDS1414420 723 - 0.507607
ydjB SDY_1505 hypothetical proteinchromosome CDS1377057 660 - 0.527273
yebH SDY_1968 putative enzymechromosome CDS1790132 810 - 0.51358
yecO SDY_1169 hypothetical proteinchromosome CDS1084147 744 + 0.505376
yecP SDY_1170 putative enzymechromosome CDS1084887 972 + 0.514403
ygcW SDY_2976 putative oxidoreductasechromosome CDS2749916 786 - 0.452926
yghA SDY_3069 putative oxidoreductasechromosome CDS2846431 885 - 0.541243
yhbL SDY_3390 sigma cross-reacting protein 27Achromosome CDS3141055 663 - 0.520362
yhiQ SDY_3565 hypothetical proteinchromosome CDS3300584 753 + 0.605578
yigI SDY_3923 hypothetical proteinchromosome CDS3655557 486 + 0.520576
yjgI SDY_4267 putative oxidoreductasechromosome CDS3998900 714 - 0.542017
yohF SDY_2151 putative oxidoreductasechromosome CDS1949351 762 + 0.551181
yojI SDY_0865 putative ATP-binding component of a transport systemchromosome CDS814416 1644 + 0.535888
yrbC SDY_3373 hypothetical proteinchromosome CDS3128514 636 - 0.523585
yrbD SDY_3374 hypothetical proteinchromosome CDS3129168 552 - 0.496377
yrbE SDY_3375 hypothetical proteinchromosome CDS3129724 783 - 0.54917
 
Shigella flexneri 2a str. 2457T, 2457T
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA S2639 hypothetical proteinchromosome CDS2529298 501 - 0.576846
NA S1848 hypothetical proteinchromosome CDS1785094 411 - 0.508516
NA S1277 hypothetical proteinchromosome CDS1236262 810 - 0.545679
NA S3222 acyl-CoA synthasechromosome CDS3107379 1689 + 0.529307
NA S1257 putative isomerasechromosome CDS1214682 660 + 0.518182
NA S3247 hypothetical proteinchromosome CDS3130957 411 - 0.513382
NA S1084 putative synthetasechromosome CDS1064463 735 - 0.557823
NA S1466 hypothetical proteinchromosome CDS1429960 1758 + 0.507964
NA S4169 hypothetical proteinchromosome CDS4072203 297 + 0.508417
NA S1288 putative sensor-type regulatorchromosome CDS1247578 1929 + 0.513738
NA S3224 hypothetical proteinchromosome CDS3110011 249 + 0.405622
NA S0688 hypothetical bacteriophage proteinchromosome CDS696632 246 - 0.49187
acpP S1178 acyl carrier proteinchromosome CDS1142224 237 + 0.481013
bioC S0768 biotin biosynthesis protein BioCchromosome CDS750506 756 + 0.562169
caiC S0036 crotonobetaine/carnitine-CoA ligasechromosome CDS35187 1569 - 0.50733
entA S0516 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS527806 747 + 0.575636
entB S0515 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS526949 858 + 0.550117
entD S0501 enterochelin synthetase, component Dchromosome CDS508075 630 - 0.485714
entE S0514 2,3-dihydroxybenzoate-AMP ligasechromosome CDS525325 1611 + 0.563004
entF S0504 ATP-dependent serine activating enzymechromosome CDS512773 3846 + 0.565003
fabB S2534 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2427944 1242 - 0.561192
fabF S1179 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1142547 1242 + 0.533011
fabG S4547 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS4452843 792 + 0.540404
fabG S1177 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1141279 735 + 0.514286
fadD S1538 acyl-CoA synthasechromosome CDS1497407 1752 + 0.511986
hcaA2 S2758 small terminal subunit of phenylpropionate dioxygenasechromosome CDS2648830 519 + 0.527938
hcaB S2760 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2649665 813 + 0.560886
hpaG S4654 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerasechromosome CDS4547972 1290 - 0.55969
hpaH S4650 2-oxo-hept-3-ene-1, 7-dioate hydratasechromosome CDS4544395 804 - 0.575871
iucA S4056 siderophore biosynthesis proteinchromosome CDS3952684 1782 - 0.535915
iucC S4054 siderophore biosynthesis proteinchromosome CDS3949994 1743 - 0.545611
iucD S4053 lysine:N6-hydroxylasechromosome CDS3948660 1338 - 0.46562
kduD S3050 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2937539 762 - 0.519685
menE S2473 O-succinylbenzoic acid--CoA ligasechromosome CDS2365835 1356 - 0.561947
menF S2478 menaquinone-specific isochorismate synthasechromosome CDS2371535 1071 - 0.538749
smtA S0981 S-adenosylmethionine-dependentmethyltransferasechromosome CDS961291 786 + 0.513995
sorD S3637 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS3519483 807 + 0.509294
srlD S2919 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS2796045 780 + 0.530769
sufI S3265 suppressor of ftsIchromosome CDS3145361 1413 - 0.56334
tauD S0271 taurine dioxygenasechromosome CDS272006 852 - 0.545775
tehB S1494 Tellurite resistance protein TehBchromosome CDS1455972 594 + 0.459596
ucpA S2627 short chain dehydrogenasechromosome CDS2519269 792 - 0.54798
vpsA S3453 putative ATP-binding component of a transport systemchromosome CDS3322554 810 - 0.54321
vpsB S3452 integral membrane proteinchromosome CDS3321764 783 - 0.554278
vpsC S3451 cytoplasmic membrane proteinchromosome CDS3321208 552 - 0.498188
yacK S0122 hypothetical proteinchromosome CDS134820 1551 + 0.545455
yafE S0204 putative biotin synthesis proteinchromosome CDS223972 621 + 0.492754
yafS S0207 hypothetical proteinchromosome CDS226844 726 + 0.495868
ybbA S0447 putative ATP-binding component of a transport systemchromosome CDS455853 687 + 0.56623
ybbO S0445 short chain dehydrogenasechromosome CDS454461 810 - 0.537037
ybdB S0517 hypothetical proteinchromosome CDS528555 414 + 0.577295
ycaC S0897 hypothetical proteinchromosome CDS891080 627 - 0.457735
yciK S1358 short chain dehydrogenasechromosome CDS1322505 759 - 0.524374
ydgB S1759 short chain dehydrogenasechromosome CDS1695251 723 + 0.50899
ydiD S1647 hypothetical proteinchromosome CDS1600707 1701 - 0.496767
ydjB S1570 hypothetical proteinchromosome CDS1528599 660 - 0.530303
yebH S1519 putative enzymechromosome CDS1479386 810 + 0.518519
yecO S2001 hypothetical proteinchromosome CDS1922862 744 + 0.505376
yecP S2002 putative enzymechromosome CDS1923602 972 + 0.520576
yeiN S2379 hypothetical proteinchromosome CDS2259308 939 - 0.492013
ygfF S3087 putative oxidoreductasechromosome CDS2971161 744 - 0.549731
yghA S3251 oxidoreductasechromosome CDS3133766 885 + 0.545763
yhbL S3467 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS3333090 654 - 0.527523
yhiQ S4240 hypothetical proteinchromosome CDS4155030 753 + 0.590969
yigI S3857 hypothetical proteinchromosome CDS3755454 486 + 0.524691
yjgI S4503 oxidoreductasechromosome CDS4405258 714 + 0.539216
yojI S2425 putative ATP-binding component of a transport systemchromosome CDS2307815 1644 - 0.532847
yrbC S3450 hypothetical proteinchromosome CDS3320554 636 - 0.52044
 
Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SF2021 hypothetical proteinchromosome CDS2045549 669 + 0.405082
NA SF1808 hypothetical proteinchromosome CDS1844431 1758 - 0.507964
NA SF2201 hypothetical proteinchromosome CDS2228275 669 + 0.405082
NA SF3023 hypothetical proteinchromosome CDS3121348 249 + 0.405622
NA SF1014 putative synthetasechromosome CDS1060231 735 - 0.557823
NA SF4375 hypothetical proteinchromosome CDS4547451 510 - 0.556863
NA SF1204 putative sensor-type regulatorchromosome CDS1247863 1929 + 0.513738
NA SF2491 hypothetical proteinchromosome CDS2551164 501 - 0.576846
NA SF3046 hypothetical proteinchromosome CDS3142294 411 - 0.513382
NA SF1191 hypothetical proteinchromosome CDS1235208 810 - 0.544444
NA SF1644 7-alpha-hydroxysteroid dehydrogenasechromosome CDS1674136 621 - 0.454106
NA SF4374 4-hydroxyphenylacetate 3-monooxygenase large chainchromosome CDS4546402 1053 - 0.54321
NA SF1169 putative isomerasechromosome CDS1211781 660 + 0.518182
NA SF3908 putative enzymechromosome CDS4028494 882 - 0.531746
NA SF1716 hypothetical proteinchromosome CDS1748137 411 - 0.508516
NA SF3021 acyl-CoA synthasechromosome CDS3118716 1689 + 0.529307
acp CP0124 Acp, putative acyl carrier proteinpCP301 CDS106938 237 - 0.291139
acpP SF1098 acyl carrier proteinchromosome CDS1139332 237 + 0.481013
bioC SF0727 biotin biosynthesis protein BioCchromosome CDS754349 756 + 0.562169
caiC SF0034 crotonobetaine/carnitine-CoA ligasechromosome CDS35701 1569 - 0.50733
entA SF0510 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS531914 747 + 0.575636
entB SF0509 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS531057 858 + 0.551282
entD SF0495 enterochelin synthetase, component Dchromosome CDS512184 630 - 0.485714
entE SF0508 2,3-dihydroxybenzoate-AMP ligasechromosome CDS529433 1611 + 0.563004
entF SF0498 ATP-dependent serine activating enzymechromosome CDS516881 3846 + 0.565003
fabB SF2399 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2448487 1242 - 0.561192
fabF SF1099 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1139654 1242 + 0.533011
fabG SF4282 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS4460650 792 + 0.540404
fabG SF1097 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1138387 735 + 0.514286
fadD SF1423 acyl-CoA synthasechromosome CDS1460476 1752 + 0.511986
hcaA2 SF2586 small terminal subunit of phenylpropionate dioxygenasechromosome CDS2655243 519 + 0.527938
hcaB SF2588 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2656078 813 + 0.560886
hpaG SF4384 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerasechromosome CDS4555819 1290 - 0.55969
hpaH SF4380 2-oxo-hept-3-ene-1, 7-dioate hydratasechromosome CDS4552242 804 - 0.575871
iucA SF3715 siderophore biosynthesis proteinchromosome CDS3820793 1782 + 0.535915
iucC SF3717 siderophore biosynthesis proteinchromosome CDS3823522 1743 + 0.545611
iucD SF3718 lysine:N6-hydroxylasechromosome CDS3825261 1338 + 0.46562
kduD SF2852 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2942858 762 - 0.519685
menE SF2339 O-succinylbenzoic acid--CoA ligasechromosome CDS2386378 1356 - 0.562684
menF SF2344 menaquinone-specific isochorismate synthasechromosome CDS2392078 1071 - 0.538749
smtA SF0917 S-adenosylmethionine-dependentmethyltransferasechromosome CDS957322 786 + 0.513995
sorD SF4093 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4251932 807 - 0.509294
srlD SF2728 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS2801410 780 + 0.530769
sufI SF3061 suppressor of ftsIchromosome CDS3156698 1413 - 0.56334
tauD SF0250 taurine dioxygenasechromosome CDS269454 852 - 0.545775
tehB SF1780 tellurite resistance protein TehBchromosome CDS1817790 594 - 0.459596
ucpA SF2480 short chain dehydrogenasechromosome CDS2541136 792 - 0.54798
vpsA SF3235 putative ATP-binding component of a transport systemchromosome CDS3331437 810 - 0.54321
vpsB SF3234 integral membrane proteinchromosome CDS3330647 783 - 0.554278
vpsC SF3233 cytoplasmic membrane proteinchromosome CDS3330091 552 - 0.498188
yacK SF0119 hypothetical proteinchromosome CDS135334 1551 + 0.544165
yafE SF0196 putative biotin synthesis proteinchromosome CDS224843 621 + 0.492754
yafS SF0199 hypothetical proteinchromosome CDS227715 726 + 0.495868
ybbA SF0439 putative ATP-binding component of a transport systemchromosome CDS456052 687 + 0.56623
ybbO SF0438 short chain dehydrogenasechromosome CDS454660 810 - 0.537037
ybbP SF0441 putative oxidoreductasechromosome CDS456735 2280 + 0.575
ybdB SF0511 hypothetical proteinchromosome CDS532663 414 + 0.577295
ycaC SF0856 hypothetical proteinchromosome CDS896266 627 - 0.457735
yciK SF1273 short chain dehydrogenasechromosome CDS1322638 759 - 0.524374
ydgB SF1627 short chain dehydrogenasechromosome CDS1655613 723 + 0.50899
ydiD SF1529 hypothetical proteinchromosome CDS1562330 1701 - 0.496767
ydjB SF1455 hypothetical proteinchromosome CDS1490225 660 - 0.530303
yebH SF1404 putative enzymechromosome CDS1442460 810 + 0.518519
yecO SF1911 hypothetical proteinchromosome CDS1946197 744 + 0.505376
yecP SF1912 putative enzymechromosome CDS1946937 972 + 0.519547
yeiN SF2250 hypothetical proteinchromosome CDS2279855 939 - 0.492013
ygfF SF2888 putative oxidoreductasechromosome CDS2979072 744 - 0.549731
yghA SF3049 oxidoreductasechromosome CDS3145103 885 + 0.545763
yhbL SF3249 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS3341973 654 - 0.527523
yhiQ SF3528 hypothetical proteinchromosome CDS3618066 753 - 0.590969
yhiU SF3599 chromosome pseudo3702719 297 - 0.508417
yhiU SF3599 chromosome pseudo3702719 297 - 0.508417
yigI SF3898 hypothetical proteinchromosome CDS4017372 486 - 0.524691
yjgI SF4241 oxidoreductasechromosome CDS4413064 714 + 0.539216
yojI SF2295 putative ATP-binding component of a transport systemchromosome CDS2328358 1644 - 0.532847
yrbC SF3232 hypothetical proteinchromosome CDS3329437 636 - 0.52044
 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SFV_1206 hypothetical proteinchromosome CDS1250048 705 - 0.557447
NA SFV_4283 hypothetical proteinchromosome CDS4429130 897 + 0.522854
NA SFV_2136 hypothetical proteinchromosome CDS2167588 495 + 0.565657
NA SFV_1663 hypothetical proteinchromosome CDS1698797 867 + 0.499423
NA SFV_1576 putative enzymechromosome CDS1611693 759 + 0.545455
NA SFV_2186 unknown protein encoded within prophagechromosome CDS2218637 657 + 0.407915
NA SFV_2490 hypothetical proteinchromosome CDS2544866 501 - 0.576846
NA SFV_2020 unknown protein encoded within prophagechromosome CDS2054224 657 + 0.407915
NA SFV_1602 hypothetical proteinchromosome CDS1632725 801 - 0.505618
NA SFV_1709 hypothetical proteinchromosome CDS1745116 411 - 0.508516
NA SFV_3985 hypothetical proteinchromosome CDS4089067 297 + 0.508417
NA SFV_1215 putative sensor-type regulatorchromosome CDS1260672 1842 + 0.513572
NA SFV_1187 putative isomerasechromosome CDS1228463 660 + 0.516667
NA SFV_2056 hypothetical proteinchromosome CDS2078139 498 - 0.475904
NA SFV_1799 hypothetical proteinchromosome CDS1842502 1758 - 0.508532
acpP SFV_1114 acyl carrier proteinchromosome CDS1157409 237 + 0.481013
acrA SFV_0436 acridine efflux pumpchromosome CDS458608 1230 - 0.534959
acrB SFV_0435 acridine efflux pumpchromosome CDS455436 3150 - 0.538095
acrD SFV_2514 Probable aminoglycoside efflux pumpchromosome CDS2571467 3114 + 0.542068
bioC SFV_0760 Biotin synthesis protein bioCchromosome CDS790327 756 + 0.562169
caiC SFV_0031 probable crotonobetaine/carnitine-CoA ligasechromosome CDS35274 1533 - 0.512068
dinF SFV_4169 DNA-damage-inducible protein Fchromosome CDS4303146 1380 - 0.555797
entA SFV_0544 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS575278 747 + 0.576975
entB SFV_0543 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS574421 858 + 0.552448
entD SFV_0528 enterochelin synthetase, component Dchromosome CDS555499 771 - 0.491569
entE SFV_0542 2,3-dihydroxybenzoate-AMP ligasechromosome CDS572797 1611 + 0.563004
entF SFV_0532 Enterobactin synthetase component Fchromosome CDS560197 3894 + 0.564458
fabF SFV_1115 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1157767 1206 + 0.531509
fabG SFV_1113 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1156464 735 + 0.514286
fadD SFV_1424 acyl-CoA synthetase, long-chain-fatty-acid--CoA ligasechromosome CDS1471047 1719 + 0.513089
hcaB SFV_2589 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2651755 813 + 0.562116
hpaG SFV_4384 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerasechromosome CDS4522894 1290 - 0.560465
hpaH SFV_4380 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS4519314 804 - 0.578358
iucA SFV_3854 siderophore biosynthesis proteinchromosome CDS3954511 1725 - 0.543768
iucC SFV_3852 siderophore biosynthesis proteinchromosome CDS3951821 1743 - 0.545611
iucD SFV_3851 lysine:N6-hydroxylasechromosome CDS3950487 1338 - 0.46562
kduD SFV_2920 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2989821 762 - 0.519685
mdlA SFV_0422 ATP-binding component of a transport systemchromosome CDS441615 1773 + 0.540891
menE SFV_2331 o-succinylbenzoate-CoA ligasechromosome CDS2380125 1356 - 0.562684
menF SFV_2336 isochorismate hydroxymutase 2chromosome CDS2385825 1296 - 0.534722
sorD SFV_4098 putative sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4224114 807 - 0.509294
srlD SFV_2800 glucitol (sorbitol)-6-phosphate dehydrogenasechromosome CDS2868509 780 - 0.530769
sufI SFV_3066 suppressor of ftsIchromosome CDS3130365 1413 - 0.564048
tauD SFV_0332 taurine dioxygenase, 2-oxoglutarate-dependentchromosome CDS350981 852 + 0.546948
tehB SFV_1776 tellurite resistancechromosome CDS1817124 594 - 0.459596
ucpA SFV_2479 putative oxidoreductasechromosome CDS2534838 792 - 0.54798
yacK SFV_0113 hypothetical proteinchromosome CDS135004 1551 + 0.545455
yadG SFV_0118 putative ATP-binding component of a transport systemchromosome CDS140620 852 + 0.491784
yafE SFV_0194 putative biotin synthesis proteinchromosome CDS223904 771 + 0.494163
yafS SFV_0197 hypothetical proteinchromosome CDS226941 723 + 0.495159
ybbO SFV_0466 putative oxidoreductasechromosome CDS492308 771 - 0.54345
ybdB SFV_0545 hypothetical proteinchromosome CDS576027 414 + 0.582126
ycaC SFV_0888 hypothetical proteinchromosome CDS930438 627 - 0.45614
yciK SFV_1283 putative oxidoreductasechromosome CDS1336569 759 - 0.525692
ydgB SFV_1621 putative oxidoreductasechromosome CDS1654721 723 + 0.50899
ydhE SFV_1685 putative transport proteinchromosome CDS1722590 1374 + 0.532751
ydjB SFV_1449 hypothetical proteinchromosome CDS1493291 642 - 0.534268
yebH SFV_1406 putative enzymechromosome CDS1453000 810 + 0.518519
yecO SFV_1906 hypothetical proteinchromosome CDS1951975 744 + 0.505376
yecP SFV_1907 putative enzymechromosome CDS1952715 972 + 0.520576
yegN SFV_2135 hypothetical proteinchromosome CDS2164960 2559 + 0.560375
yegO SFV_2137 hypothetical proteinchromosome CDS2168083 3066 + 0.57045
yeiN SFV_2240 hypothetical proteinchromosome CDS2273548 939 - 0.493078
yghA SFV_3055 putative oxidoreductasechromosome CDS3118811 885 + 0.545763
yhbL SFV_3239 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS3305630 654 - 0.527523
yhiH SFV_3487 Hypothetical ABC transporter ATP-binding protein yhiHchromosome CDS3551858 2736 - 0.566886
yhiQ SFV_3509 hypothetical proteinchromosome CDS3578629 753 - 0.590969
yiaV SFV_3948 hypothetical proteinchromosome CDS4051266 1137 + 0.506596
yibH SFV_3940 hypothetical proteinchromosome CDS4042254 1086 + 0.519337
yigI SFV_3678 hypothetical proteinchromosome CDS3765811 486 + 0.524691
yjcR SFV_4129 hypothetical proteinchromosome CDS4258152 972 + 0.567901
yjgI SFV_4245 putative oxidoreductasechromosome CDS4381646 714 + 0.537815
yojI SFV_2286 putative ATP-binding component of a transport systemchromosome CDS2322083 1644 - 0.534063
yrbC SFV_3222 hypothetical proteinchromosome CDS3293094 636 - 0.52044
yrbD SFV_3223 hypothetical proteinchromosome CDS3293748 552 - 0.498188
yrbE SFV_3224 hypothetical proteinchromosome CDS3294304 783 - 0.554278
yrbF SFV_3225 putative ATP-binding component of a transport systemchromosome CDS3295094 810 - 0.54321
ysgA SFV_3668 putative hydrolasechromosome CDS3754482 693 + 0.542569
 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSON_1662 putative N-hydroxyarylamine O-acetyltransferasechromosome CDS1760735 846 - 0.518913
NA SSON_1736 hypothetical proteinchromosome CDS1839495 1758 - 0.505119
NA SSON_2178 unknown protein encoded by prophagechromosome CDS2281713 432 + 0.409722
NA SSON_2527 hypothetical proteinchromosome CDS2663984 507 - 0.579882
NA SSON_1030 putative synthetasechromosome CDS1108871 735 - 0.559184
NA SSON_1886 unknown protein encoded within prophagechromosome CDS1985869 657 + 0.414003
NA SSON_1470 hypothetical proteinchromosome CDS1546340 411 + 0.508516
NA SSON_1887 putative bacteriophage tail proteinchromosome CDS1987134 612 + 0.431373
acp SSO_P086 AcppSS_046 CDS80158 237 - 0.295359
acpP SSON_1114 acyl carrier proteinchromosome CDS1192906 237 + 0.481013
bioC SSON_0756 biotin biosynthesis proteinchromosome CDS800608 756 + 0.564815
caiC SSON_0043 probable crotonobetaine/carnitine-CoA ligasechromosome CDS44336 1569 - 0.511791
cchA SSON_2537 detox proteinchromosome CDS2674223 336 - 0.568452
cchB SSON_2536 detox proteinchromosome CDS2673829 288 - 0.53125
entA SSON_0547 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesischromosome CDS588082 747 + 0.575636
entB SSON_0546 2,3-dihydro-2,3-dihydroxybenzoate synthetasechromosome CDS587225 858 + 0.55711
entC SSON_0544 isochorismate hydroxymutase 2chromosome CDS584416 1176 + 0.562925
entD SSON_0533 enterochelin synthetase, component Dchromosome CDS568904 630 - 0.466667
entE SSON_0545 2,3-dihydroxybenzoate-AMP ligasechromosome CDS585601 1611 + 0.560521
entF SSON_0537 ATP-dependent serine activating enzymechromosome CDS573602 3882 + 0.563627
fabB SSON_2381 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2512163 1221 - 0.562654
fabF SSON_1115 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1193230 1242 + 0.533011
fabG SSON_1113 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1191961 735 + 0.517007
fadD SSON_1356 acyl-CoA synthetasechromosome CDS1430364 1686 + 0.511862
hcaA2 SSON_2621 small terminal subunit of phenylpropionate dioxygenasechromosome CDS2773582 519 + 0.518304
hcaB SSON_2623 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenasechromosome CDS2774417 813 + 0.562116
hdhA SSON_1541 NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acidschromosome CDS1616635 768 + 0.484375
hpaB SSON_4489 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS4762425 1563 - 0.543826
hpaG SSON_4499 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerasechromosome CDS4772375 1290 - 0.556589
hpaH SSON_4495 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS4768755 804 - 0.585821
idnO SSON_4451 5-keto-D-gluconate 5-reductasechromosome CDS4723050 765 - 0.494118
iucA SSON_3601 siderophore biosynthesis proteinchromosome CDS3767550 1725 + 0.543768
iucC SSON_3603 siderophore biosynthesis proteinchromosome CDS3770222 1743 + 0.545037
iucD SSON_3604 lysine:N6-hydroxylasechromosome CDS3771961 1338 + 0.467862
kduD SSON_3002 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3154779 762 - 0.515748
menE SSON_2321 o-succinylbenzoate-CoA ligasechromosome CDS2449417 1422 - 0.554852
menF SSON_2326 isochorismate hydroxymutase 2chromosome CDS2455183 1071 - 0.542484
mhpD SSON_0329 2-keto-4-pentenoate hydratasechromosome CDS356486 816 + 0.556373
mhpF SSON_0330 acetaldehyde dehydrogenasechromosome CDS357298 951 + 0.547844
pduA SSON_2058 putative propanediol utilization protein: polyhedral bodieschromosome CDS2157020 285 + 0.526316
pduC SSON_2060 putative propanediol utilization protein: glycerol dehydratase large subunitchromosome CDS2158132 1665 + 0.511712
pduE SSON_2062 putative propanediol utilization protein: diol dehydratase small subunitchromosome CDS2160489 519 + 0.481696
pduJ SSON_2065 putative propanediol utilization protein: polyhedral bodieschromosome CDS2163209 276 + 0.528986
pduK SSON_2066 putative propanediol utilization protein: polyhedral bodieschromosome CDS2163508 423 + 0.555556
pduL SSON_2067 putative propanediol utilization proteinchromosome CDS2163933 633 + 0.526066
pduN SSON_2069 putative propanediol utilization protein: polyhedral bodieschromosome CDS2165057 276 + 0.568841
pduT SSON_2074 putative propanediol utilization protein: polyhedral bodieschromosome CDS2170201 555 + 0.535135
smtA SSON_0923 S-adenosylmethionine-dependentmethyltransferasechromosome CDS989244 786 + 0.517812
sorD SSON_4198 putative sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4449884 807 - 0.51425
sufI SSON_3159 suppressor of ftsIchromosome CDS3317584 1413 - 0.564756
tauD SSON_0346 taurine dioxygenase, 2-oxoglutarate-dependentchromosome CDS371877 852 + 0.545775
tehB SSON_1712 tellurite resistancechromosome CDS1815669 594 - 0.454545
ucpA SSON_2515 putative oxidoreductasechromosome CDS2652770 858 - 0.539627
yacK SSON_0131 hypothetical proteinchromosome CDS146214 1551 + 0.541586
yafE SSON_0224 putative biotin synthesis proteinchromosome CDS248363 624 + 0.496795
yafS SSON_0227 hypothetical proteinchromosome CDS251236 741 + 0.492578
ybbA SSON_0483 putative ATP-binding component of a transport systemchromosome CDS512983 687 + 0.56623
ybbO SSON_0482 putative oxidoreductasechromosome CDS511590 810 - 0.538272
ybbP SSON_0485 putative oxidoreductasechromosome CDS513666 2415 + 0.575155
ybdB SSON_0548 hypothetical proteinchromosome CDS588831 414 + 0.574879
ycaC SSON_0898 hypothetical proteinchromosome CDS958825 627 - 0.457735
ycgM SSON_1169 putative isomerasechromosome CDS1248351 660 + 0.518182
yciK SSON_1872 putative oxidoreductasechromosome CDS1971200 759 + 0.527009
ydgB SSON_1554 putative oxidoreductasechromosome CDS1632975 723 - 0.517289
ydjB SSON_1387 hypothetical proteinchromosome CDS1461011 660 - 0.524242
yebH SSON_1338 putative enzymechromosome CDS1412278 810 + 0.511111
yecD SSON_1274 hypothetical proteinchromosome CDS1349015 600 - 0.525
yecO SSON_1250 hypothetical proteinchromosome CDS1326241 744 - 0.502688
yecP SSON_1249 putative enzymechromosome CDS1325273 972 - 0.521605
yeiN SSON_2221 hypothetical proteinchromosome CDS2330191 939 - 0.467519
ygfF SSON_3055 putative oxidoreductasechromosome CDS3214964 744 - 0.544355
yghA SSON_3147 putative oxidoreductasechromosome CDS3306100 885 + 0.546893
yghYX SSON_3144 Predicted hydrolasechromosome CDS3303291 927 - 0.514563
yhbL SSON_3357 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS3528880 663 - 0.526395
yhiQ SSON_3732 hypothetical proteinchromosome CDS3913732 753 - 0.586985
yigI SSON_3994 hypothetical proteinchromosome CDS4218323 486 - 0.526749
yjcS SSON_4265 hypothetical proteinchromosome CDS4530044 1998 - 0.51952
yjgI SSON_4429 putative oxidoreductasechromosome CDS4699793 714 - 0.540616
yohF SSON_2194 putative oxidoreductasechromosome CDS2299442 762 - 0.553806
yojI SSON_2269 putative ATP-binding component of a transport systemchromosome CDS2381166 1644 - 0.53528
yrbC SSON_3340 hypothetical proteinchromosome CDS3516330 636 - 0.522013
yrbD SSON_3341 hypothetical proteinchromosome CDS3516984 552 - 0.498188
yrbE SSON_3342 hypothetical proteinchromosome CDS3517540 783 - 0.550447
ysgA SSON_4005 putative hydrolasechromosome CDS4232801 690 - 0.543478
 
Sodalis glossinidius str. morsitans, morsitans
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SG0625 putative dehydrogenasechromosome CDS1068378 846 - 0.588652
NA SG0914 hypothetical proteinchromosome CDS1483193 858 + 0.544289
NA SG1252 hypothetical proteinchromosome CDS2113972 972 - 0.588477
NA SG0221 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS405464 516 + 0.594961
NA SG0207 hypothetical proteinchromosome CDS386261 528 + 0.545455
NA SG0699 putative ABC transporter ATP-binding proteinchromosome CDS1178184 567 + 0.587302
NA SG0208 hypothetical proteinchromosome CDS386926 636 + 0.573899
NA SG0284 N-acylhomoserine lactone synthasechromosome CDS508464 630 + 0.433333
NA SG1061 acyl carrier proteinchromosome CDS1764096 237 + 0.455696
NA SG2126 putative dehydrogenasechromosome CDS3690465 717 - 0.546722
NA SG1773 putative gluconate 5-dehydrogenasechromosome CDS3027820 657 + 0.563166
NA SG0206 hypothetical proteinchromosome CDS385474 783 + 0.586207
NA SG0277 putative cell division proteinchromosome CDS500479 1422 + 0.599156
NA SG2339 hypothetical proteinchromosome CDS4016071 471 + 0.613588
NA SG0752 hypothetical proteinchromosome CDS1254574 483 + 0.57971
NA SGP2_0010 putative hydantoinasepSG2 CDS13726 1554 + 0.356499
NA SG2120 putative type II restriction enzymechromosome CDS3666409 975 + 0.569231
NA SG0905 biotin synthesis protein BioCchromosome CDS1468833 780 + 0.629487
NA SGP1_0041 achromobactin biosynthetic and transport gene acsCpSG1 CDS65393 1821 - 0.56123
NA SG1256 putative isochorismatasechromosome CDS2117159 633 - 0.609795
NA SG0097 hypothetical proteinchromosome CDS154660 825 + 0.572121
NA SGP1_0039 achromobactin biosynthetic and transport gene acsApSG1 CDS62774 1848 - 0.5671
NA SG0205 putative ABC transporter ATP-binding componentchromosome CDS384656 810 + 0.581481
NA SG2133 hydantoinasechromosome CDS3704944 1563 - 0.605886
NA SG1884 ethanolamine utilization protein EutNchromosome CDS3223056 273 + 0.512821
NA SG0590 hypothetical proteinchromosome CDS997903 729 + 0.56653
NA SG1062 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS1764414 1242 + 0.584541
NA SG0283 putative oxidoreductasechromosome CDS507514 471 - 0.549894
NA SG2369 hypothetical proteinchromosome CDS4068243 771 - 0.587549
NA SG1322 putative methyltransferasechromosome CDS2201365 579 + 0.594128
NA SGP1_0044 achromobactin biosynthetic and transport gene acsDpSG1 CDS69804 1785 - 0.582073
NA SG1253 hypothetical proteinchromosome CDS2114940 744 - 0.534946
NA SG2219 polyketide synthasechromosome CDS3855044 1059 + 0.516525
NA SG1623 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS2780070 1212 - 0.588284
NA SG1000 putative S-adenosylmethionine-dependent methyltransferasechromosome CDS1645177 600 + 0.536667
NA SG1338 putative isomerasechromosome CDS2219977 525 + 0.531429
NA SG1148 hypothetical proteinchromosome CDS1909731 825 + 0.572121
NA SG1060 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS1763207 735 + 0.522449
 
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP WGLp092 hypothetical proteinchromosome CDS99504 237 + 0.337553
bioC WGLp455 hypothetical proteinchromosome CDS528358 762 + 0.251969
fabB WGLp408 hypothetical proteinchromosome CDS470322 1224 - 0.300654
fabG WGLp091 hypothetical proteinchromosome CDS98638 735 + 0.251701
 
Yersinia enterocolitica subsp. enterocolitica 8081, 8081
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YE1514 putative HlyD family secretion proteinchromosome CDS1691350 1116 + 0.469534
NA YE1506 hypothetical proteinchromosome CDS1681290 888 - 0.400901
NA YE1971 probable membrane transport proteinchromosome CDS2151310 1203 + 0.53616
NA YE2402 hypothetical proteinchromosome CDS2590582 972 + 0.518519
NA YE3354 putative oxidoreductasechromosome CDS3666293 750 + 0.492
NA YE2204 putative short chain dehydrogenasechromosome CDS2415176 762 + 0.505249
NA YE0536 putative lipoproteinchromosome CDS608930 1083 + 0.493998
NA YE0791 ABC transporter, ATP-binding componentchromosome CDS913856 2151 + 0.498838
NA YE1959 hypothetical proteinchromosome CDS2138910 735 - 0.420408
NA YE2398 putative isochorismatasechromosome CDS2587549 597 + 0.514238
NA YE2069 putative short chain dehydrogeneasechromosome CDS2266718 741 - 0.504723
NA YE0792 putative type I secretion proteinchromosome CDS916006 1176 + 0.510204
NA YE0127 ABC transporter proteinchromosome CDS144005 1782 + 0.470258
NA YE1697 hypothetical proteinchromosome CDS1891740 711 - 0.457103
NA YE0537 putative multi-drug efflux proteinchromosome CDS610012 3087 + 0.505993
NA YE2891 HlyD family secretion proteinchromosome CDS3143202 987 + 0.516717
NA YE3596 putative drug efflux proteinchromosome CDS3915387 1203 - 0.506234
NA YE4053 hypothetical proteinchromosome CDS4418851 759 - 0.546772
NA YE1949 putative isochorismatasechromosome CDS2128354 693 - 0.52381
NA YE2642 putative phosphopantetheinyl transferasechromosome CDS2859267 750 - 0.453333
NA YE2146 putative hlyD-family proteinchromosome CDS2345444 858 + 0.470862
NA YE0128 HlyD family secretion proteinchromosome CDS145917 1233 + 0.472019
NA YE0798 putative acyl-carrier-proteinchromosome CDS922897 720 + 0.520833
NA YE0795 putative acyl-carrier-proteinchromosome CDS920547 1251 + 0.531575
NA YE3592 isochorismatase family proteinchromosome CDS3909060 528 - 0.445076
NA YE3595 putative integral membrane efflux proteinchromosome CDS3912249 3126 - 0.527191
NA YE2966 putative hemolysinchromosome CDS3227908 1452 + 0.359504
NA YE1748 putative ABC transporter (ATP-binding protein)chromosome CDS1944755 1719 - 0.473531
NA YE3193 hypothetical proteinchromosome CDS3470920 771 - 0.459144
NA YE3530 putative HlyD family secretion proteinchromosome CDS3844419 1050 - 0.534286
NA YE1998 putative RTX-family toxin transporterchromosome CDS2180469 2127 + 0.45275
NA YE1200 putative HlyD family secretion proteinchromosome CDS1339325 1209 - 0.502068
NA YE0250 putative carboxymethylenebutenolidasechromosome CDS287893 711 - 0.488045
NA YE0444 multidrug efflux proteinchromosome CDS516891 3126 + 0.50128
NA YE2892 putative ABC transporter ATP-binding proteinchromosome CDS3144202 1752 + 0.50742
NA YE1696 putative ABC transport protein, ATP-binding componentchromosome CDS1890125 1545 - 0.485437
NA YE0899 putative acyl carrier proteinchromosome CDS1028812 252 + 0.353175
NA YE4124 Putative member of isochorismatase hydrolase familychromosome CDS4513765 1095 + 0.500457
NA YE2824 hypothetical proteinchromosome CDS3071142 1263 + 0.342043
NA YE0920 hypothetical proteinchromosome CDS1047443 720 + 0.491667
NA YE1151 multidrug efflux proteinchromosome CDS1289613 3132 - 0.496169
NA YE1999 hemolysin transport proteinchromosome CDS2182592 1395 + 0.477419
NA YE0341 putative dehydrogenase/reductasechromosome CDS406648 774 - 0.51938
NA YE2860 putative short chain dehydrogenasechromosome CDS3110994 747 + 0.481928
NA YE1576 putative 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1776892 1275 - 0.512157
NA YE3176 probable short-chain dehydrogenasechromosome CDS3447512 681 - 0.496329
NA YE3629 putative efflux system proteinchromosome CDS3955284 1530 + 0.526797
NA YE2163 putative transport proteinchromosome CDS2364118 1374 + 0.494905
NA YE0898 putative acyl carrier proteinchromosome CDS1028539 258 + 0.383721
NA YE2366 putative fumarylacetoacetate hydrolase family proteinchromosome CDS2555251 657 - 0.482496
NA YE2401 hypothetical proteinchromosome CDS2589884 702 + 0.485755
NA YE0908 putative beta-ketoacyl-[ACP] synthasechromosome CDS1037041 1176 + 0.506803
NA YE3532 hypothetical proteinchromosome CDS3845878 1464 - 0.514344
NA YE0894 putative O-methyltransferasechromosome CDS1025066 1110 - 0.41982
NA YE4052 metalloproteasechromosome CDS4417247 1479 + 0.413117
NA YE1322 putative RTX-family proteinchromosome CDS1467937 6333 + 0.334912
NA YE2679 putative sugar transporterchromosome CDS2905488 1398 - 0.486409
NA YE1008 hypothetical proteinchromosome CDS1127808 756 + 0.48545
NA YE0443 multidrug efflux proteinchromosome CDS515727 1161 + 0.518519
NA YE2000 putative toxin transport proteinchromosome CDS2183989 2133 + 0.477731
NA YE0797 hypothetical proteinchromosome CDS922629 249 + 0.453815
NA YE1418 putative O-methyltransferasechromosome CDS1590524 1032 - 0.438953
aas YE3327 Aas bifunctional proteinchromosome CDS3636055 2157 - 0.511822
acpP YE1636 acyl carrier proteinchromosome CDS1841393 237 + 0.421941
acpY YE3533 hypothetical proteinchromosome CDS3847625 252 - 0.472222
acrA YE3100 multidrug efflux proteinchromosome CDS3373045 1188 + 0.495791
acrB YE3101 multidrug efflux proteinchromosome CDS3374249 3153 + 0.497304
bioC YE2905 biotin synthesis protein BioCchromosome CDS3157849 747 - 0.518072
budA YE4016 alpha-acetolactate decarboxylasechromosome CDS4372967 786 + 0.480916
ccmA YE1263 putative heme exporter protein Achromosome CDS1406645 627 + 0.499203
cydC YE1521 transport ATP-binding proteinchromosome CDS1699549 1725 - 0.491594
cydD YE1522 transport ATP-binding proteinchromosome CDS1701276 1767 - 0.482739
dhaR YE0550 glycerol metabolism operon regulatory proteinchromosome CDS629026 1920 - 0.503125
emrA YE3242 multidrug resistance protein Achromosome CDS3535043 1173 + 0.492754
fabB YE1287 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS1430569 1224 + 0.50817
fabF YE0911 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1039402 1248 + 0.511218
fabF YE1637 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1841724 1239 + 0.503632
fabG YE1635 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS1840505 735 + 0.502041
fabG YE0910 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS1038674 732 + 0.487705
fadD YE2375 long-chain-fatty-acid-CoA ligasechromosome CDS2561645 1695 - 0.479646
gutD YE1095 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS1225058 837 - 0.46595
hutI YE2461 imidazolonepropionasechromosome CDS2646387 1221 + 0.489762
idnO YE1363 gluconate 5-dehydrogenasechromosome CDS1517663 765 - 0.436601
irp4 YE2620 yersiniabactin biosynthetic protein YbtTchromosome CDS2837033 804 + 0.588308
irp5 YE2621 yersiniabactin siderophore biosynthetic proteinchromosome CDS2837840 1578 + 0.584918
irp6 YE2615 lipoprotein inner membrane ABC-transporterchromosome CDS2817001 1803 - 0.566833
irp7 YE2614 inner membrane ABC-transporter YbtQchromosome CDS2815212 1803 - 0.590128
kduD1 YE1887 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2071104 762 - 0.492126
mdl YE3122 probable ABC transporter (ATP-binding protein)chromosome CDS3394598 1767 - 0.488964
mdl YE3121 probable ATP transporter (ATP-binding protein)chromosome CDS3392827 1779 - 0.505902
menE YE1379 putative O-succinylbenzoic acid--CoA ligasechromosome CDS1538356 1239 + 0.540759
menF YE1373 menaquinone-specific isochorismate synthasechromosome CDS1532262 1359 + 0.491538
msbA YE1543 probable transport ATP-binding proteinchromosome CDS1733187 1749 + 0.469411
nam YE2262 putative pyrazinamidase/nicotinamidasechromosome CDS2471842 654 + 0.469419
phnM YE0471 PhnM proteinchromosome CDS546933 1149 - 0.534378
rrmA YE1768 rRNA (guanine-N1-)-methyltransferasechromosome CDS1959577 861 + 0.491289
ssiD YE3945 putative taurine dioxygenasechromosome CDS4286814 849 - 0.518257
sufI YE3654 putative cell division proteinchromosome CDS3985062 1428 - 0.537115
tam YE2842 putative trans-aconitate methyltransferasechromosome CDS3090075 777 + 0.522523
tehB YE2489 putative tellurite resistance proteinchromosome CDS2681392 870 - 0.409195
yacK YE0712 hypothetical proteinchromosome CDS827646 1602 + 0.533084
yadG YE0715 putative ABC transporter, ATP-binding proteinchromosome CDS830904 927 + 0.470334
ybbO YE3056 probable short-chain dehydrogenasechromosome CDS3321900 777 + 0.51094
yegM YE1109 putitive HlyD family secretion proteinchromosome CDS1242703 1332 - 0.536036
yegN YE1108 AcrB/AcrD/AcrF family membrane proteinchromosome CDS1239560 3144 - 0.541349
yegO YE1107 AcrB/AcrD/AcrF family membrane proteinchromosome CDS1236489 3075 - 0.533984
yhcQ YE3795 putative HlyD family secretion proteinchromosome CDS4138868 936 - 0.521368
 
Yersinia pestis Antiqua, Antiqua
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPA_2020 menaquinone-specific isochorismate synthasechromosome CDS2264934 1374 - 0.5131
NA YPA_1141 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS1293287 1563 + 0.486884
NA YPA_3730 hypothetical proteinchromosome CDS4182957 558 + 0.480287
NA YPA_1431 hypothetical proteinchromosome CDS1611523 972 - 0.52572
NA YPA_0719 hypothetical proteinchromosome CDS831274 1029 - 0.525753
NA YPA_0748 putative beta-ketoacyl-(acyl-carrier-protein) synthasechromosome CDS860017 1284 + 0.433022
NA YPA_3287 putative taurine dioxygenasechromosome CDS3624305 849 - 0.510012
NA YPA_3376 hypothetical proteinchromosome CDS3755874 1128 + 0.490248
NA YPA_3373 putative siderophore biosysnthesis proteinchromosome CDS3747326 1689 + 0.534636
NA YPA_0696 putative methyltransferasechromosome CDS797530 786 + 0.478372
NA YPA_1287 yersiniabactin biosynthetic protein YbtUchromosome CDS1428452 1101 - 0.603996
NA YPA_0824 putative siderophore biosynthetic enzymechromosome CDS952802 1299 + 0.431101
NA YPA_0862 putative hydrolasechromosome CDS998080 843 + 0.5172
NA YPA_1122 rRNA (guanine-N1-)-methyltransferasechromosome CDS1272054 840 + 0.485714
NA YPA_1464 putative fumarylacetoacetate hydrolase family proteinchromosome CDS1646808 657 + 0.473364
NA YPA_0102 ABC transporter proteinchromosome CDS121153 1818 + 0.490649
NA YPA_1133 hypothetical proteinchromosome CDS1286026 633 + 0.515008
NA YPA_3749 enhancing lycopene biosynthesis protein 2chromosome CDS4206017 654 + 0.457187
NA YPA_0187 hypothetical proteinchromosome CDS223332 471 - 0.484076
NA YPA_0654 putative HlyD family secretion proteinchromosome CDS740886 1113 + 0.490566
NA YPA_0271 putative siderophore biosynthesis protein IucDchromosome CDS314833 1329 - 0.535741
NA YPA_1375 putative dehydrogenasechromosome CDS1550270 681 - 0.403818
NA YPA_1285 yersiniabactin siderophore biosynthetic proteinchromosome CDS1426071 1578 - 0.588086
NA YPA_0274 siderophore biosynthesis protein, IucA famillychromosome CDS318837 1071 - 0.546219
NA YPA_2015 putative O-succinylbenzoic acid--CoA ligasechromosome CDS2258943 1416 - 0.576977
NA YPA_3377 putative thioesterasechromosome CDS3756994 765 + 0.486275
NA YPA_3369 hypothetical proteinchromosome CDS3735424 3414 + 0.463386
NA YPA_3118 putative cell division proteinchromosome CDS3457733 1425 - 0.524211
NA YPA_0277 hypothetical proteinchromosome CDS322261 834 - 0.383693
NA YPA_0272 putative siderophore biosynthesis protein IucCchromosome CDS316158 1749 - 0.539165
NA YPA_2443 hypothetical proteinchromosome CDS2725562 747 + 0.496653
NA YPA_1332 putative tellurite resistance proteinchromosome CDS1495527 888 + 0.45045
NA YPA_1354 imidazolonepropionasechromosome CDS1524528 1221 - 0.502867
NA YPA_2141 putative fimbrial proteinchromosome CDS2402215 1032 + 0.453488
NA YPA_0876 putative phosphopantetheinyl transferasechromosome CDS1014367 741 + 0.468286
NA YPA_1374 hypothetical proteinchromosome CDS1549506 660 - 0.443939
NA YPA_2911 hypothetical proteinchromosome CDS3239350 1602 - 0.532459
NA YPA_2709 hypothetical proteinchromosome CDS3013927 639 - 0.425665
NA YPA_1186 putative oxidoreductasechromosome CDS1337633 2067 + 0.520561
NA YPA_0755 putative acyl carrier proteinchromosome CDS866115 249 + 0.337349
NA YPA_1291 lipoprotein inner membrane ABC-transporterchromosome CDS1446642 1713 + 0.578517
NA YPA_1286 yersiniabactin biosynthetic protein YbtTchromosome CDS1427652 789 - 0.584284
NA YPA_0632 hypothetical proteinchromosome CDS720067 798 + 0.498747
NA YPA_1432 hypothetical proteinchromosome CDS1612491 804 - 0.49005
NA YPA_1517 putative pyrazinamidase/nicotinamidasechromosome CDS1701344 648 - 0.496914
NA YPA_2031 gluconate 5-dehydrogenasechromosome CDS2278364 870 + 0.441379
NA YPA_0431 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS501262 756 - 0.533069
NA YPA_1060 biotin synthesis protein BioCchromosome CDS1212201 804 + 0.538557
NA YPA_3728 putative ABC transporter ATP-binding proteinchromosome CDS4181134 819 + 0.492063
NA YPA_0861 putative oxidoreductasechromosome CDS997292 741 + 0.535762
NA YPA_3447 hypothetical proteinchromosome CDS3851816 2115 + 0.437352
NA YPA_0745 putative short chain dehydrogenasechromosome CDS857544 747 - 0.420348
NA YPA_1926 3-oxoacyl-(acyl-carrier protein) reductasechromosome CDS2160390 735 - 0.482993
NA YPA_0280 N-acylhomoserine lactone synthase YspIchromosome CDS326133 651 - 0.411674
NA YPA_1289 yersiniabactin biosynthetic proteinchromosome CDS1439128 6108 - 0.601506
NA YPA_3729 hypothetical proteinchromosome CDS4182170 783 + 0.50447
NA YPA_1138 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS1290206 804 + 0.50995
NA YPA_1288 yersiniabactin biosynthetic proteinchromosome CDS1429549 9492 - 0.60788
NA YPA_0753 putative short chain dehydrogenasechromosome CDS864762 789 + 0.395437
NA YPA_1611 putative ABC associated RTX toxin transporter, HlyD/MFP familychromosome CDS1799399 393 + 0.501272
NA YPA_1134 5-carboxymethyl-2-hydroxymuconate delta-isomerasechromosome CDS1286655 765 + 0.482353
NA YPA_0722 hypothetical proteinchromosome CDS834133 375 - 0.506667
NA YPA_2692 short-chain dehydrogenasechromosome CDS2991338 681 - 0.503671
NA YPA_1573 putative short chain dehydrogenasechromosome CDS1760208 762 - 0.520997
NA YPA_0237 putative carboxymethylenebutenolidasechromosome CDS277490 873 - 0.498282
NA YPA_1924 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS2158664 1242 - 0.492754
NA YPA_0749 putative beta-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS861293 747 + 0.432396
NA YPA_2573 putative permeasechromosome CDS2865032 2430 - 0.546502
NA YPA_3801 hypothetical proteinchromosome CDS4274325 771 - 0.574578
NA YPA_1925 acyl carrier proteinchromosome CDS2160000 237 - 0.434599
NA YPA_2574 putative ABC transporter ATP-binding proteinchromosome CDS2867458 687 - 0.521106
NA YPA_0826 putative siderophore biosynthetic enzymechromosome CDS954675 1845 + 0.469377
NA YPA_2086 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS2340188 1224 - 0.495098
NA YPA_2559 hypothetical proteinchromosome CDS2851053 1764 - 0.521542
NA YPA_1954 N-acylhomoserine lactone synthase YpeIchromosome CDS2185941 645 + 0.368992
NA YPA_2793 putative dehydrogenasechromosome CDS3113522 771 + 0.499352
NA YPA_1003 putative short chain oxidoreductasechromosome CDS1149825 816 - 0.58701
NA YPA_0663 transport ATP-binding proteinchromosome CDS751636 1767 - 0.506508
NA YPA_1750 hypothetical proteinchromosome CDS1963754 417 - 0.53717
NA YPA_1610 hypothetical proteinchromosome CDS1798422 1002 + 0.479042
NA YPA_1794 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2009769 807 + 0.486989
NA YPA_0318 putative virulence determinantchromosome CDS371331 9333 + 0.372228
NA YPA_3731 hypothetical proteinchromosome CDS4183527 624 + 0.482372
NA YPA_0558 hypothetical proteinchromosome CDS644659 720 + 0.466667
NA YPA_0275 hypothetical proteinchromosome CDS320000 609 - 0.504105
NA YPA_2576 short-chain dehydrogenasechromosome CDS2869137 777 + 0.526384
NA YPA_1457 long-chain-fatty-acid-CoA ligasechromosome CDS1639483 1722 + 0.482578
NA YPA_3374 putative siderophore biosysnthesis proteinchromosome CDS3749027 5784 + 0.49101
 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPO3409 hypothetical proteinchromosome CDS3806901 1602 - 0.532459
NA YPO0773 putative thioesterasechromosome CDS839849 765 - 0.487582
NA YPO3574 hypothetical proteinchromosome CDS3985614 783 - 0.50447
NA YPO3572 hypothetical proteinchromosome CDS3984416 624 - 0.482372
NA YPO1580 putative phosphopantetheinyl transferasechromosome CDS1802436 741 + 0.468286
NA YPO3078 putative permeasechromosome CDS3433367 2430 - 0.546502
NA YPO1455 putative beta-ketoacyl-[acyl-carrier-protein] synthasechromosome CDS1648112 1284 + 0.433022
NA YPO1538 putative siderophore biosynthetic enzymechromosome CDS1751263 1815 - 0.426446
NA YPO3835 hypothetical proteinchromosome CDS4303604 471 + 0.484076
NA YPO1532 putative siderophore biosynthetic enzymechromosome CDS1742758 1845 + 0.469377
NA YPO2215 short chain dehydrogenasechromosome CDS2488256 762 - 0.520997
NA YPO3351 short chain dehydrogenasechromosome CDS3737661 771 - 0.499352
NA YPO3974 hypothetical proteinchromosome CDS4473845 771 - 0.574578
NA YPO1566 putative hydrolasechromosome CDS1786150 843 + 0.5172
NA YPO1346 hypothetical proteinchromosome CDS1510239 789 + 0.500634
NA YPO0777 putative siderophore biosysnthesis proteinchromosome CDS848635 1653 - 0.534785
NA YPO1992 hypothetical proteinchromosome CDS2264507 660 - 0.443939
NA YPO3218 hypothetical proteinchromosome CDS3582249 522 - 0.43295
NA YPO1460 putative short chain dehydrogenasechromosome CDS1652857 789 + 0.395437
NA YPO1993 putative dehydrogenasechromosome CDS2265271 681 - 0.403818
NA YPO1811 short chain dehydrogenasechromosome CDS2056525 2067 + 0.520561
NA YPO0947 putative virulence determinantchromosome CDS1037479 9333 - 0.372228
NA YPO2814 hypothetical proteinchromosome CDS3144781 1764 - 0.520975
NA YPO2049 hypothetical proteinchromosome CDS2327210 972 - 0.52572
NA YPO3973 metalloproteasechromosome CDS4472443 1338 + 0.420777
NA YPO1462 putative acyl carrier proteinchromosome CDS1654210 249 + 0.337349
NA YPO1080 hypothetical proteinchromosome CDS1227924 720 + 0.466667
NA YPO0774 hypothetical proteinchromosome CDS840606 1128 - 0.490248
NA YPO2950 putative fimbrial proteinchromosome CDS3296795 1032 + 0.453488
NA YPO3199 short chain dehydrogenasechromosome CDS3559660 681 - 0.503671
NA YPO1949 putative tellurite resistance proteinchromosome CDS2210492 888 + 0.45045
NA YPO1565 putative oxidoreductasechromosome CDS1785362 741 + 0.535762
NA YPO2082 putative fumarylacetoacetate hydrolase family proteinchromosome CDS2361784 657 + 0.473364
NA YPO3081 short chain dehydrogenasechromosome CDS3437472 777 + 0.526384
NA YPO1456 putative beta-ketoacyl-[acyl-carrier-protein] reductasechromosome CDS1649388 747 + 0.432396
NA YPO3573 hypothetical proteinchromosome CDS3985052 558 - 0.480287
NA YPO3079 putative ABC transporter ATP-binding proteinchromosome CDS3435793 687 - 0.521106
NA YPO1452 putative short chain dehydrogenasechromosome CDS1645639 747 - 0.420348
NA YPO3787 putative carboxymethylenebutenolidasechromosome CDS4251211 804 + 0.493781
NA YPO0778 putative siderophore biosysnthesis proteinchromosome CDS850331 6606 - 0.500757
NA YPO0776 putative siderophore biosysnthesis proteinchromosome CDS842803 5820 - 0.492612
NA YPO1287 putative short chain oxidoreductasechromosome CDS1445162 816 - 0.58701
NA YPO0987 hypothetical proteinchromosome CDS1095052 834 + 0.383693
NA YPO3575 putative ABC transporter ATP-binding proteinchromosome CDS3986614 819 - 0.492063
NA YPO2406 hypothetical proteinchromosome CDS2702351 417 - 0.53717
NA YPO2050 hypothetical proteinchromosome CDS2328178 804 - 0.49005
acpP YPO1600 acyl carrier proteinchromosome CDS1824120 237 + 0.434599
alcA YPO1530 putative siderophore biosynthetic enzymechromosome CDS1740885 1299 + 0.431101
bioC YPO1153 biotin synthesis protein BioCchromosome CDS1299245 804 + 0.538557
elbB YPO3553 enhancing lycopene biosynthesis protein 2chromosome CDS3961893 654 - 0.457187
fabB YPO2757 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS3089861 1224 + 0.495098
fabF YPO1601 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1824451 1242 + 0.492754
fabG YPO1599 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1823232 735 + 0.482993
fadD YPO2074 acyl-CoA synthasechromosome CDS2354492 1689 + 0.484902
hpaB YPO1769 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS2014131 1563 + 0.486884
hpaH YPO1766 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS2011050 804 + 0.50995
hutI YPO1972 imidazolonepropionasechromosome CDS2239529 1221 - 0.502867
idnO YPO2539 gluconate 5-dehydrogenasechromosome CDS2851419 765 + 0.443137
irp1 YPO1910 yersiniabactin biosynthetic proteinchromosome CDS2146470 9492 - 0.60788
irp2 YPO1911 yersiniabactin biosynthetic proteinchromosome CDS2156049 6108 - 0.601506
iucC YPO0992 putative siderophore biosynthesis protein IucCchromosome CDS1100240 1749 + 0.539165
iucD YPO0993 putative siderophore biosynthesis protein IucDchromosome CDS1101985 1329 + 0.535741
kduD1 YPO1724 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS1969761 762 - 0.488189
kduD2 YPO0839 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS918783 756 + 0.533069
menE YPO2523 O-succinylbenzoic acid--CoA ligasechromosome CDS2831893 1416 - 0.576977
menF YPO2528 menaquinone-specific isochorismate synthasechromosome CDS2837884 1368 - 0.512427
pncA YPO2160 putative pyrazinamidase/nicotinamidasechromosome CDS2429382 648 - 0.496914
rrmA YPO1748 rRNA (guanine-N1-)-methyltransferasechromosome CDS1990939 840 + 0.485714
smtA YPO1402 putative methyltransferasechromosome CDS1585713 786 + 0.478372
sufI YPO0673 putative cell division proteinchromosome CDS734264 1425 + 0.524211
tauD YPO0185 putative taurine dioxygenasechromosome CDS203005 849 + 0.510012
ybtE YPO1907 yersiniabactin siderophore biosynthetic proteinchromosome CDS2142992 1578 - 0.588086
ybtT YPO1908 yersiniabactin biosynthetic protein YbtTchromosome CDS2144573 804 - 0.583333
ybtU YPO1909 yersiniabactin biosynthetic protein YbtUchromosome CDS2145373 1101 - 0.603996
ypeI YPO2456 N-acylhomoserine lactone synthase YpeIchromosome CDS2754119 657 + 0.365297
yspI YPO0984 N-acylhomoserine lactone synthase YspIchromosome CDS1091363 651 + 0.411674
 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA y2229 isomerasechromosome CDS2457043 693 - 0.468975
NA y1933 hypothetical proteinchromosome CDS2131491 417 + 0.53717
NA y0395 hypothetical proteinchromosome CDS441615 471 - 0.484076
NA y1118 hypothetical proteinchromosome CDS1254614 1764 + 0.521542
NA y2561 enzymechromosome CDS2822979 840 - 0.485714
NA y3419 hypothetical proteinchromosome CDS3791123 1128 + 0.490248
NA y1645 gluconate 5-dehydrogenasechromosome CDS1819141 726 + 0.451791
NA y3377 hypothetical proteinchromosome CDS3723154 834 + 0.383693
NA y1533 hypothetical proteinchromosome CDS1696883 1032 - 0.453488
NA y2056 short chain dehydrogenasechromosome CDS2264516 849 - 0.508834
NA y0777 hypothetical proteinchromosome CDS869982 1674 + 0.528076
NA y2261 hypothetical proteinchromosome CDS2490503 804 + 0.49005
NA y2599 isomerasechromosome CDS2862610 843 - 0.5172
NA y0839 short chain dehydrogenasechromosome CDS940153 771 + 0.499352
NA y2340 imidazolonepropionasechromosome CDS2576019 1296 + 0.502315
NA y3096 hypothetical proteinchromosome CDS3406165 720 - 0.466667
NA y1833 hypothetical proteinchromosome CDS2018116 732 + 0.464481
NA y2262 enzymechromosome CDS2491303 972 + 0.52572
NA y3856 hypothetical proteinchromosome CDS4294468 771 + 0.574578
NA y2741 hypothetical proteinchromosome CDS3024987 411 + 0.491484
NA y3333 hypothetical proteinchromosome CDS3665557 9333 - 0.372228
NA y2162 hypothetical proteinchromosome CDS2390163 648 + 0.496914
NA y0144 hypothetical proteinchromosome CDS154816 573 - 0.481675
NA y2836 ABC transport proteinchromosome CDS3138663 798 - 0.498747
NA y2318 hypothetical proteinchromosome CDS2551685 660 + 0.443939
NA y0125 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS131666 654 - 0.457187
NA y1101 oxidoreductasechromosome CDS1239957 2442 + 0.547093
NA y3420 thioesterasechromosome CDS3792240 768 + 0.488281
NA y3411 hypothetical proteinchromosome CDS3782224 333 + 0.531532
NA y0143 hypothetical proteinchromosome CDS154180 624 - 0.482372
NA y0145 hypothetical proteinchromosome CDS155378 783 - 0.50447
NA y3406 nonribosomal peptide synthetase/polyketide synthasechromosome CDS3770663 3414 + 0.463386
NA y1098 short chain dehydrogenasechromosome CDS1237517 777 - 0.526384
NA y0970 biotin synthesis proteinchromosome CDS1095812 522 + 0.43295
NA y0443 carboxymethylenebutenolidasechromosome CDS493701 873 - 0.498282
NA y2497 short chain dehydrogenasechromosome CDS2758268 2067 - 0.520561
NA y0984 short chain dehydrogenasechromosome CDS1116142 681 + 0.503671
NA y2317 oxidoreductasechromosome CDS2550900 681 + 0.403818
NA y1100 ATP-binding component of a transport systemchromosome CDS1239286 687 + 0.521106
NA y3412 hypothetical proteinchromosome CDS3782564 1689 + 0.534636
NA y0146 ATP-binding component of ABC transport systemchromosome CDS156378 819 - 0.492063
NA y3857 secreted metalloproteasechromosome CDS4295303 1338 - 0.420777
NA y2709 3-oxoacyl-acyl carrier protein reductasechromosome CDS2993981 789 - 0.395437
HMWP2 y3410 nonribosomal peptide synthetasechromosome CDS3775907 6405 + 0.498205
acpP y1759 acyl carrier proteinchromosome CDS1941388 237 + 0.434599
bioC y3029 biotin biosynthesis proteinchromosome CDS3336759 804 - 0.538557
fabB y1591 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1758401 1224 + 0.495098
fabF y1760 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1941719 1242 + 0.492754
fabF y2714 beta-ketoacyl-acp synthasechromosome CDS2998231 1284 - 0.433022
fabF y2744 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS3027228 1029 + 0.525753
fabG y2713 3-ketoacyl-acyl carrier protein reductasechromosome CDS2997492 792 - 0.433081
fabG y1758 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS1940500 735 + 0.482993
fabG y2897 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS3201746 816 + 0.58701
fabG y2717 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenasechromosome CDS3001241 747 + 0.420348
fadD y2236 acyl-CoA synthasechromosome CDS2463303 1740 - 0.481609
hpaB y2539 component B of 4-hydroxyphenylacetic acid-hydroxylasechromosome CDS2801023 1563 - 0.486884
hpaH y2542 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS2804863 804 - 0.50995
irp1 y2400 HMWP1 nonribosomal peptide/polyketide synthasechromosome CDS2660837 9492 + 0.60788
irp2 y2399 HMWP2 nonribosomal peptide synthetasechromosome CDS2654642 6108 + 0.601506
iucA1 y3380 aerobactin synthetase (subunit alpha)chromosome CDS3725640 609 + 0.504105
iucA2 y3381 aerobactin synthetase (subunit alpha)chromosome CDS3726341 1071 + 0.546219
iucC y3383 aerobactin synthetase (subunit beta)chromosome CDS3728342 1749 + 0.539165
iucD y3384 lysine : N6-hydroxylasechromosome CDS3730087 1329 + 0.535741
kduD y1886 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2085066 807 - 0.486989
kduD y3224 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3548806 756 + 0.533069
menE y1664 O-succinylbenzoic acid--CoA ligasechromosome CDS1838811 1467 + 0.579414
menF y1659 menaquinone-specific isochorismate synthasechromosome CDS1832913 1374 + 0.5131
smtA y2768 S-adenosylmethionine-dependentmethyltransferasechromosome CDS3061232 792 - 0.478535
sufI y3504 suppressor of ftsIchromosome CDS3886844 1425 - 0.524211
tauD y3966 taurine dioxygenasechromosome CDS4424091 867 + 0.508651
tehB y2361 tellurite resistancechromosome CDS2605419 888 - 0.45045
ucpA y2600 oxidoreductasechromosome CDS2863500 741 - 0.535762
ybtD y2584 yersiniabactin biosynthesis componentchromosome CDS2846453 657 - 0.461187
ybtE y2403 salicyl-AMP ligasechromosome CDS2672229 1578 + 0.588086
ybtT y2402 yersiniabactin thioesterasechromosome CDS2671569 657 + 0.578387
ybtU y2401 thiazolinyl-S-HMWP1 reductasechromosome CDS2670265 1161 + 0.601206
ypeI y1733 homoserine lactone synthasechromosome CDS1917056 657 - 0.365297
ysuG y2638 siderophore biosynthetic proteinchromosome CDS2904979 1890 - 0.469841
ysuI y2640 siderophore biosynthetic proteinchromosome CDS2907398 1299 - 0.431101
ytbI y3374 N-acylhomoserine lactone synthasechromosome CDS3719465 651 + 0.411674
 
Yersinia pestis Nepal516, Nepal516
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPN_1452 imidazolonepropionasechromosome CDS1650826 1221 - 0.502867
NA YPN_2996 Aas bifunctional proteinchromosome CDS3367035 1959 - 0.519142
NA YPN_2413 hydrolasechromosome CDS2697940 843 - 0.5172
NA YPN_1682 short-chain dehydrogenasechromosome CDS1896903 762 - 0.520997
NA YPN_2607 transport ATP-binding proteinchromosome CDS2942142 1767 + 0.506508
NA YPN_2638 hypothetical proteinchromosome CDS2974680 798 - 0.498747
NA YPN_3214 hypothetical proteinchromosome CDS3638445 1128 - 0.490248
NA YPN_2134 gluconate 5-dehydrogenasechromosome CDS2413098 870 + 0.441379
NA YPN_2442 siderophore biosynthetic enzymechromosome CDS2731855 1815 + 0.426446
NA YPN_2361 5-carboxymethyl-2-hydroxymuconate delta-isomerasechromosome CDS2643732 771 - 0.481193
NA YPN_2448 siderophore biosynthetic enzymechromosome CDS2740330 1845 - 0.469377
NA YPN_2028 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS2291132 1242 - 0.492754
NA YPN_2029 acyl carrier proteinchromosome CDS2292468 237 - 0.434599
NA YPN_2450 siderophore biosynthetic enzymechromosome CDS2742749 1299 - 0.431101
NA YPN_2374 rRNA (guanine-N1-)-methyltransferasechromosome CDS2658264 840 - 0.485714
NA YPN_0531 cell division proteinchromosome CDS643801 1425 + 0.524211
NA YPN_3436 enhancing lycopene biosynthesis protein 2chromosome CDS3918469 654 - 0.457187
NA YPN_2362 hypothetical proteinchromosome CDS2644499 633 - 0.515008
NA YPN_2118 O-succinylbenzoic acid--CoA ligasechromosome CDS2393677 1416 - 0.576977
NA YPN_2522 beta-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS2833556 747 - 0.432396
NA YPN_3457 ABC transporter ATP-binding proteinchromosome CDS3943181 819 - 0.492063
NA YPN_1551 long-chain-fatty-acid-CoA ligasechromosome CDS1763071 1722 + 0.482578
NA YPN_1720 ABC associated RTX toxin transporter, HlyD/MFP familychromosome CDS1936222 393 + 0.501272
NA YPN_1027 hypothetical proteinchromosome CDS1184498 1764 + 0.521542
NA YPN_1719 hypothetical proteinchromosome CDS1935245 1002 + 0.479042
NA YPN_1906 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2148163 807 + 0.486989
NA YPN_1473 dehydrogenasechromosome CDS1676556 681 - 0.403818
NA YPN_2189 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS2474368 1224 - 0.495098
NA YPN_3191 siderophore biosynthesis protein IucDchromosome CDS3597959 1329 + 0.535741
NA YPN_3621 metalloproteasechromosome CDS4147947 1329 + 0.421369
NA YPN_1472 hypothetical proteinchromosome CDS1675792 660 - 0.443939
NA YPN_0177 carboxymethylenebutenolidasechromosome CDS221683 873 - 0.498282
NA YPN_2691 short-chain oxidoreductasechromosome CDS3037754 816 + 0.58701
NA YPN_0890 short-chain dehydrogenasechromosome CDS1043282 681 + 0.503671
NA YPN_3217 siderophore biosysnthesis proteinchromosome CDS3646443 1689 - 0.534636
NA YPN_2357 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS2640142 804 - 0.50995
NA YPN_0129 hypothetical proteinchromosome CDS169637 471 - 0.484076
NA YPN_3041 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3416645 756 + 0.533069
NA YPN_2516 acyl carrier proteinchromosome CDS2829232 249 - 0.337349
NA YPN_3144 virulence determinantchromosome CDS3533384 9333 - 0.372228
NA YPN_2400 phosphopantetheinyl transferasechromosome CDS2681756 741 - 0.468286
NA YPN_2523 beta-ketoacyl-(acyl-carrier-protein) synthasechromosome CDS2834295 1284 - 0.433022
NA YPN_0876 hypothetical proteinchromosome CDS1022694 639 + 0.425665
NA YPN_3182 N-acylhomoserine lactone synthase YspIchromosome CDS3587337 651 + 0.411674
NA YPN_2817 ATPasechromosome CDS3171748 1743 + 0.512335
NA YPN_1430 fimbrial proteinchromosome CDS1626806 1032 - 0.453488
NA YPN_3213 thioesterasechromosome CDS3637688 765 - 0.487582
NA YPN_2313 oxidoreductasechromosome CDS2593395 2067 - 0.520561
NA YPN_1197 hypothetical proteinchromosome CDS1361349 747 + 0.496653
NA YPN_2526 short-chain dehydrogenasechromosome CDS2837305 747 + 0.420348
NA YPN_1626 pyrazinamidase/nicotinamidasechromosome CDS1837996 648 - 0.496914
NA YPN_3221 hypothetical proteinchromosome CDS3656620 3414 - 0.463386
NA YPN_2123 menaquinone-specific isochorismate synthasechromosome CDS2399668 1374 - 0.5131
NA YPN_3187 hypothetical proteinchromosome CDS3593512 609 + 0.504105
NA YPN_1558 fumarylacetoacetate hydrolase family proteinchromosome CDS1770396 657 + 0.473364
NA YPN_3188 siderophore biosynthesis protein, IucA famillychromosome CDS3594213 1071 + 0.546219
NA YPN_3456 membrane proteinchromosome CDS3942181 783 - 0.50447
NA YPN_3882 taurine dioxygenasechromosome CDS4416400 849 - 0.510012
NA YPN_2616 HlyD family secretion proteinchromosome CDS2953547 1113 - 0.490566
NA YPN_2518 short-chain dehydrogenasechromosome CDS2830045 789 - 0.395437
NA YPN_3190 siderophore biosynthesis protein IucCchromosome CDS3596214 1749 + 0.539165
NA YPN_1010 ABC transporter ATP-binding proteinchromosome CDS1168460 687 + 0.521106
NA YPN_2575 methyltransferasechromosome CDS2897252 786 - 0.478372
NA YPN_1526 hypothetical proteinchromosome CDS1735822 972 - 0.52572
NA YPN_1527 hypothetical proteinchromosome CDS1736790 804 - 0.49005
NA YPN_2549 hypothetical proteinchromosome CDS2861088 375 + 0.506667
NA YPN_3455 membrane proteinchromosome CDS3941619 558 - 0.480287
NA YPN_0743 dehydrogenasechromosome CDS869130 771 + 0.499352
NA YPN_2030 3-oxoacyl-(acyl-carrier protein) reductasechromosome CDS2292858 735 - 0.482993
NA YPN_2848 biotin synthesis protein BioCchromosome CDS3205808 804 - 0.538557
NA YPN_3454 hypothetical proteinchromosome CDS3940983 624 - 0.482372
NA YPN_2052 N-acylhomoserine lactone synthase YpeIchromosome CDS2316392 645 + 0.368992
NA YPN_1011 permeasechromosome CDS1169143 2430 + 0.546502
NA YPN_1008 short-chain dehydrogenasechromosome CDS1166691 777 - 0.526384
NA YPN_3185 hypothetical proteinchromosome CDS3591026 834 + 0.383693
NA YPN_1860 hypothetical proteinchromosome CDS2100805 417 - 0.53717
NA YPN_2552 hypothetical proteinchromosome CDS2863293 1029 + 0.525753
NA YPN_2354 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS2636302 1563 - 0.486884
NA YPN_0679 hypothetical proteinchromosome CDS798990 1602 + 0.532459
NA YPN_3622 hypothetical proteinchromosome CDS4149340 771 - 0.574578
NA YPN_2918 hypothetical proteinchromosome CDS3275232 720 - 0.466667
NA YPN_2414 oxidoreductasechromosome CDS2698830 741 - 0.535762
NA YPN_1718 ABC RTX toxin transporter, fused ATP-binding/permease domainschromosome CDS1934894 327 + 0.477064
NA YPN_3218 siderophore biosysnthesis proteinchromosome CDS3648139 6651 - 0.500677
 
Yersinia pestis biovar Microtus str. 91001, 91001
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YP_2577 putative fimbrial proteinchromosome CDS2856168 1032 + 0.453488
NA YP_3830 putative ABC transporter ATP-binding proteinchromosome CDS4358112 819 - 0.492063
NA YP_0846 putative permeasechromosome CDS917790 2442 + 0.547093
NA YP_3828 hypothetical proteinchromosome CDS4356550 573 - 0.47993
NA YP_3335 metalloproteasechromosome CDS3731235 1338 + 0.420777
NA YP_1582 short chain dehydrogenasechromosome CDS1730741 2073 - 0.520984
NA YP_1427 putative siderophore biosynthetic enzymechromosome CDS1578174 1815 - 0.426446
NA YP_3427 hypothetical proteinchromosome CDS3876832 1128 + 0.490248
NA YP_3494 putative virulence determinantchromosome CDS3972453 9333 + 0.372335
NA YP_3452 hypothetical proteinchromosome CDS3923357 834 - 0.383693
NA YP_3829 hypothetical proteinchromosome CDS4357112 783 - 0.50447
NA YP_3827 hypothetical proteinchromosome CDS4355914 624 - 0.482372
NA YP_3262 putative carboxymethylenebutenolidasechromosome CDS3637531 873 - 0.498282
acpP1 YP_1354 putative acyl carrier proteinchromosome CDS1483121 249 + 0.337349
acpP3 YP_2254 acyl carrier proteinchromosome CDS2501439 237 - 0.434599
alcA YP_1419 putative siderophore biosynthetic enzymechromosome CDS1567796 1299 + 0.431101
bioC YP_1007 biotin synthesis protein BioCchromosome CDS1084838 804 - 0.538557
caiC YP_2334 O-succinylbenzoic acid--CoA ligasechromosome CDS2595988 1416 - 0.576977
elbB YP_3807 enhancing lycopene biosynthesis protein 2chromosome CDS4333400 654 - 0.457187
entF1 YP_3423 putative siderophore biosysnthesis proteinchromosome CDS3858296 9936 + 0.488124
entF2 YP_3424 putative siderophore biosysnthesis proteinchromosome CDS3868275 1653 + 0.534785
entF3 YP_3425 putative siderophore biosysnthesis proteinchromosome CDS3869940 5829 + 0.492023
fabB YP_2406 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2675321 1200 - 0.495833
fabF2 YP_1167 chromosome pseudo1255568 1029 + 0.525753
fabF3 YP_1347 putative beta-ketoacyl-[acyl-carrier-protein] synthasechromosome CDS1477023 1284 + 0.433022
fabF4 YP_2253 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2500103 1242 - 0.492754
fabG YP_2255 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS2501829 735 - 0.482993
fabG1 YP_0336 short chain dehydrogenasechromosome CDS352779 771 + 0.499352
fabG2 YP_0733 short chain dehydrogenasechromosome CDS795878 681 + 0.503671
fabG3 YP_0843 short chain dehydrogenasechromosome CDS915350 777 - 0.526384
fabG4 YP_1304 putative short chain oxidoreductasechromosome CDS1428130 816 + 0.58701
fabG5 YP_1344 putative short chain dehydrogenasechromosome CDS1474550 747 - 0.420348
fabG6 YP_1348 putative beta-ketoacyl-[acyl-carrier-protein] reductasechromosome CDS1478254 792 + 0.433081
fabG7 YP_1352 putative short chain dehydrogenasechromosome CDS1481768 789 + 0.395437
fabG8 YP_1840 putative dehydrogenasechromosome CDS2050366 681 - 0.403818
fabG9 YP_2012 short chain dehydrogenasechromosome CDS2234114 849 - 0.508834
fadD YP_1917 acyl-CoA synthasechromosome CDS2136325 1740 + 0.481609
grsT YP_3428 putative thioesterasechromosome CDS3877949 768 + 0.488281
hpaB YP_1624 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS1773368 1563 - 0.486884
hpaH YP_1627 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS1777208 804 - 0.50995
hutI YP_1714 imidazolonepropionasechromosome CDS1895670 1221 - 0.502867
idnO YP_2350 gluconate 5-dehydrogenasechromosome CDS2615393 870 + 0.441379
irp1 YP_1653 yersiniabactin biosynthetic proteinchromosome CDS1803214 9492 - 0.60767
irp2 YP_1654 yersiniabactin biosynthetic proteinchromosome CDS1812793 6126 - 0.601371
iucC YP_3448 putative siderophore biosynthesis protein IucCchromosome CDS3917254 1749 - 0.539165
iucD YP_3447 putative siderophore biosynthesis protein IucDchromosome CDS3915929 1329 - 0.536494
kduD YP_1749 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS1938275 807 - 0.486989
kduD2 YP_3535 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS4023569 756 + 0.531746
menF YP_2339 menaquinone-specific isochorismate synthasechromosome CDS2601979 1374 - 0.5131
mhpD2 YP_1454 putative hydrolasechromosome CDS1611622 843 + 0.5172
mhpD3 YP_1925 putative fumarylacetoacetate hydrolase family proteinchromosome CDS2143778 543 + 0.475138
paaI1 YP_2193 Uncharacterized protein, possibly involved in aromatic compounds catabolismchromosome CDS2438879 417 - 0.53717
paaI2 YP_3213 Uncharacterized protein, possibly involved in aromatic compounds catabolismchromosome CDS3585498 471 - 0.484076
phnL2 YP_0845 putative ABC transporter ATP-binding proteinchromosome CDS917119 687 + 0.521106
pldB1 YP_0867 Lysophospholipasechromosome CDS932445 1764 + 0.521542
pncA YP_1960 putative pyrazinamidase/nicotinamidasechromosome CDS2178508 648 - 0.496914
rrmA YP_1488 rRNA (guanine-N1-)-methyltransferasechromosome CDS1647777 840 + 0.485714
smtA1 YP_0717 SAM-dependent methyltransferasechromosome CDS775548 522 + 0.43295
smtA2 YP_1191 putative methyltransferasechromosome CDS1289566 792 - 0.479798
smtA3 YP_1250 putative ABC transport proteinchromosome CDS1364989 798 - 0.498747
smtA4 YP_1839 SAM-dependent methyltransferasechromosome CDS2049602 660 - 0.443939
smtA5 YP_1892 SAM-dependent methyltransferasechromosome CDS2109609 972 - 0.52572
smtA6 YP_1893 SAM-dependent methyltransferasechromosome CDS2110577 804 - 0.49005
smtA8 YP_2769 SAM-dependent methyltransferasechromosome CDS3074451 720 - 0.466667
smtA9 YP_3336 SAM-dependent methyltransferasechromosome CDS3732637 771 - 0.574578
sufI1 YP_0276 hypothetical proteinchromosome CDS282546 1776 + 0.522523
sufI2 YP_2989 putative cell division proteinchromosome CDS3326206 1425 + 0.524912
tauD YP_0184 putative taurine dioxygenasechromosome CDS201715 867 + 0.507497
tehB YP_1693 putative tellurite resistance proteinchromosome CDS1867254 888 + 0.45045
ucpA YP_1453 putative oxidoreductasechromosome CDS1610834 741 + 0.535762
ybtD YP_1468 putative phosphopantetheinyl transferasechromosome CDS1627907 741 + 0.468286
ybtE YP_1650 yersiniabactin siderophore biosynthetic proteinchromosome CDS1799736 1578 - 0.588086
ybtT YP_1651 yersiniabactin biosynthetic protein YbtTchromosome CDS1801317 804 - 0.583333
ybtU YP_1652 yersiniabactin biosynthetic protein YbtUchromosome CDS1802117 1161 - 0.601206
ypeI YP_2275 N-acylhomoserine lactone synthase YpeIchromosome CDS2524043 657 + 0.365297
yspI YP_3455 N-acylhomoserine lactone synthase YspIchromosome CDS3927235 651 - 0.411674
ysuG YP_1421 putative siderophore biosynthetic enzymechromosome CDS1569624 1890 + 0.469841
 
Yersinia pseudotuberculosis IP 32953, IP32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB1607 putative phosphopantetheinyl transferasechromosome CDS1954627 741 + 0.469636
NA YPTB1478 putative 3-oxoacyl-acyl carrier protein reductasechromosome CDS1772255 789 + 0.395437
NA YPTB1575 putative oxidoreductasechromosome CDS1901469 741 + 0.537112
NA YPTB2196 putative transcriptional regulatorchromosome CDS2585058 1803 - 0.513034
NA YPTB2675 putative fimbrial proteinchromosome CDS3162076 1032 + 0.46124
NA YPTB2033 hypothetical proteinchromosome CDS2397145 804 - 0.492537
NA YPTB3261 hypothetical proteinchromosome CDS3841125 834 + 0.384892
NA YPTB1638 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-carboxymeth...chromosome CDS1989521 765 + 0.478431
NA YPTB1550 putative siderophore biosynthetic enzymechromosome CDS1866652 1815 - 0.427548
NA YPTB2137 short chain dehydrogenasechromosome CDS2512472 762 - 0.519685
NA YPTB1474 putative beta-ketoacyl-[acyl-carrier-protein] reductasechromosome CDS1768786 747 + 0.429719
NA YPTB3219 pore forming RTX toxin family proteinchromosome CDS3783316 9312 - 0.371241
NA YPTB1684 short chain dehydrogenasechromosome CDS2037975 2067 + 0.52298
NA YPTB0200 hypothetical proteinchromosome CDS240730 471 - 0.484076
NA YPTB1473 putative beta-ketoacyl-[acyl-carrier-protein] synthasechromosome CDS1767510 1284 + 0.430685
NA YPTB2315 hypothetical proteinchromosome CDS2732264 417 - 0.53717
NA YPTB1480 putative acyl carrier proteinchromosome CDS1773608 249 + 0.337349
NA YPTB3297 possible high molecular weight siderophore biosynthesis protein.chromosome CDS3902935 11661 - 0.496098
NA YPTB2966 hypothetical proteinchromosome CDS3499431 720 - 0.465278
NA YPTB2032 hypothetical proteinchromosome CDS2396177 972 - 0.524691
NA YPTB0923 short chain dehydrogenasechromosome CDS1115815 681 + 0.503671
NA YPTB0249 putative carboxymethylenebutenolidasechromosome CDS294124 804 - 0.493781
NA YPTB3815 hypothetical proteinchromosome CDS4550129 771 - 0.575875
NA YPTB3293 putative thioesterasechromosome CDS3894299 774 - 0.488372
NA YPTB1027 short chain dehydrogenasechromosome CDS1233999 777 - 0.526384
NA YPTB1470 putative short chain dehydrogenasechromosome CDS1765037 747 - 0.420348
NA YPTB1984 hypothetical proteinchromosome CDS2339993 660 - 0.443939
NA YPTB3294 hypothetical proteinchromosome CDS3895065 1128 - 0.496454
NA YPTB2064 putative fumarylacetoacetate hydrolase family proteinchromosome CDS2430775 657 + 0.473364
NA YPTB1030 putative permeasechromosome CDS1236451 2430 + 0.542387
NA YPTB1985 putative dehydrogenasechromosome CDS2340757 681 - 0.405286
NA YPTB3814 metalloproteasechromosome CDS4548727 1338 + 0.422272
NA YPTB3296 putative siderophore biosysnthesis protein.chromosome CDS3897256 5667 - 0.492324
NA YPTB1576 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase / 5-carboxymeth...chromosome CDS1902257 843 + 0.518387
NA YPTB1372 hypothetical proteinchromosome CDS1634450 789 + 0.503169
NA YPTB1319 putative short chain oxidoreductasechromosome CDS1571294 816 - 0.584559
NA YPTB1047 hypothetical proteinchromosome CDS1250418 1764 + 0.520975
NA YPTB1886 hypothetical proteinchromosome CDS2228366 726 + 0.318182
NA YPTB0781 short chain dehydrogenasechromosome CDS939092 771 + 0.499352
NA YPTB1888 hypothetical proteinchromosome CDS2229918 813 + 0.377614
acpP YPTB2470 acyl carrier proteinchromosome CDS2915805 237 - 0.434599
alcA YPTB1542 putative siderophore biosynthetic enzymechromosome CDS1856239 1299 + 0.431871
alcC YPTB1544 putative siderophore biosynthetic enzymechromosome CDS1858112 1845 + 0.469919
bioC YPTB1184 biotin synthesis protein BioCchromosome CDS1411713 804 + 0.537313
elbB YPTB3498 enhancing lycopene biosynthesis protein 2chromosome CDS4163287 654 - 0.457187
fabB YPTB2626 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS3103047 1224 - 0.498366
fabF YPTB2469 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2914469 1242 - 0.492754
fabF2 YPTB1449 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS1741759 1275 - 0.523922
fabG YPTB2471 3-ketoacyl-(acyl-carrier-protein) reductasechromosome CDS2916195 735 - 0.482993
fadD YPTB2057 acyl-CoA synthasechromosome CDS2423483 1689 + 0.485494
hpaB YPTB1645 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS1996222 1563 + 0.486884
hpaG YPTB1637 putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-ca...chromosome CDS1988892 633 + 0.510269
hpaH YPTB1642 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS1993141 804 + 0.504975
hutI YPTB1966 imidazolonepropionasechromosome CDS2316318 1221 - 0.506142
idnO YPTB2571 gluconate 5-dehydrogenasechromosome CDS3042812 765 + 0.44183
irp1 YPTB1595 yersiniabactin biosynthetic proteinchromosome CDS1924950 9492 - 0.60788
irp2 YPTB1596 yersiniabactin biosynthetic proteinchromosome CDS1934529 6108 - 0.601506
iucC YPTB3265 putative siderophore biosynthesis protein IucCchromosome CDS3846315 1749 + 0.539737
iucD YPTB3266 putative siderophore biosynthesis protein IucDchromosome CDS3848060 1329 + 0.536494
kduD1 YPTB2357 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2777111 762 + 0.488189
kduD2 YPTB3083 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3636899 756 + 0.533069
menE YPTB2556 O-succinylbenzoic acid--CoA ligasechromosome CDS3023204 1416 - 0.576977
menF YPTB2561 menaquinone-specific isochorismate synthasechromosome CDS3029195 1374 - 0.510917
pncA YPTB2086 putative pyrazinamidase/nicotinamidasechromosome CDS2456678 648 - 0.5
rhbC YPTB3263 possible siderophore biosynthesis protein, IucA famillychromosome CDS3843612 1773 + 0.532431
rrmA YPTB1626 rRNA (guanine-N1-)-methyltransferasechromosome CDS1974795 840 + 0.486905
smtA YPTB1427 putative methyltransferasechromosome CDS1709395 786 + 0.478372
sufI YPTB3390 putative cell division proteinchromosome CDS4025644 1425 - 0.522807
tauD YPTB3719 putative taurine dioxygenasechromosome CDS4414613 849 - 0.510012
tehB YPTB1947 putative tellurite resistance proteinchromosome CDS2288891 888 + 0.451577
yacK YPTB0722 conserved cupredoxin-like proteinchromosome CDS867390 1602 + 0.531835
yafE YPTB0908 putative methyltransferase in menaquinone/biotin biosynthesischromosome CDS1095450 522 + 0.427203
ybbA YPTB1029 putative ABC transporter ATP-binding proteinchromosome CDS1235768 687 + 0.519651
ybtE YPTB1592 yersiniabactin siderophore biosynthetic proteinchromosome CDS1921472 1578 - 0.58872
ybtT YPTB1593 yersiniabactin biosynthetic protein YbtTchromosome CDS1923053 789 - 0.584284
ybtU YPTB1594 yersiniabactin biosynthetic protein YbtUchromosome CDS1923853 1101 - 0.603088
ypsI YPTB2499 N-acylhomoserine lactone synthase YpeIchromosome CDS2949583 645 + 0.367442
yrbC YPTB3516 Conserved putative exported proteinchromosome CDS4185269 624 - 0.483974
yrbD YPTB3517 Conserved putative membrane proteinchromosome CDS4185905 558 - 0.483871
yrbE YPTB3518 ABC transporter, permease subunit, toluene tolerance proteinchromosome CDS4186467 783 - 0.505747
yrbF YPTB3519 ABC transporter, ATP-binding subunit, toluene tolerance proteinchromosome CDS4187467 819 - 0.489621
yspI YPTB3258 N-acylhomoserine lactone synthase YspIchromosome CDS3837443 651 + 0.411674