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2024-05-18 13:41:33

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Shigella flexneri 5 str. 8401, 8401

Number of genes found: 234

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SFV_2391 putative transport proteinchromosome CDS2440951 1179 - 0.569975
NA SFV_1819 multidrug resistance-like proteinchromosome CDS1867956 969 - 0.416925
NA SFV_1736 putative transport proteinchromosome CDS1776779 897 + 0.536232
NA SFV_0711 putative bacteriophage proteinchromosome CDS746126 507 - 0.530572
NA SFV_1028 putative cytochromechromosome CDS1073540 594 + 0.557239
NA SFV_1440 putative transport proteinchromosome CDS1484824 1230 + 0.503252
NA SFV_0830 putative DEOR-type transcriptional regulatorchromosome CDS867541 1155 - 0.548052
NA SFV_1208 putative iron compound ABC transporter, permease proteinchromosome CDS1251622 981 - 0.541284
NA SFV_1199 hypothetical proteinchromosome CDS1242515 1737 - 0.526195
NA SFV_2977 hypothetical lipoproteinchromosome CDS3048101 399 + 0.54386
NA SFV_1738 putative ATP-binding component of a transport systemchromosome CDS1778651 771 + 0.536965
NA SFV_2449 putative transport system permeasechromosome CDS2508047 1239 - 0.531073
NA SFV_1607 putative chloride channelchromosome CDS1638992 1317 + 0.536826
NA SFV_2910 putative transport proteinchromosome CDS2977747 714 + 0.495798
NA SFV_2823 Permease (major facilitator superfamily)chromosome CDS2887385 921 - 0.551574
NA SFV_2978 putative ATP-binding protein of ABC transport systemchromosome CDS3048487 678 + 0.542773
NA SFV_1715 putative amino acid/amine transport proteinchromosome CDS1753249 1161 + 0.458226
NA SFV_0813 putative transport proteinchromosome CDS849555 1545 + 0.52233
NA SFV_0814 putative transport system permease proteinchromosome CDS851117 921 + 0.534202
NA SFV_1831 putative transport periplasmic proteinchromosome CDS1878545 1635 - 0.476453
NA SFV_1401 putative transport proteinchromosome CDS1448412 1485 - 0.513805
NA SFV_1547 putative transport proteinchromosome CDS1585807 1005 + 0.477612
NA SFV_1722 putative sulfatasechromosome CDS1757742 1491 + 0.439973
NA SFV_1816 hypothetical proteinchromosome CDS1864163 984 - 0.518293
NA SFV_2483 hypothetical proteinchromosome CDS2539284 900 - 0.56
NA SFV_1614 possible chaperonechromosome CDS1646566 330 - 0.521212
NA SFV_1209 putative ATP-binding protein of ABC transporterchromosome CDS1252602 1023 - 0.538612
NA SFV_2715 putative terminase small subunitchromosome CDS2781596 324 + 0.447531
NA SFV_2540 putative oxidoreductasechromosome CDS2601508 360 + 0.522222
NA SFV_1615 possible chaperonechromosome CDS1646882 366 - 0.42623
NA SFV_2979 putative ATP-binding protein of ABC transport systemchromosome CDS3049302 534 + 0.543071
NA SFV_1207 putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1250867 759 - 0.540184
abc SFV_0183 ATP-binding component of a transporterchromosome CDS212171 1032 - 0.524225
ampG SFV_0408 regulates beta-lactamase synthesischromosome CDS424820 1476 - 0.542005
amtB SFV_0425 probable ammonium transporterchromosome CDS445710 1287 + 0.555556
apaG SFV_0044 hypothetical proteinchromosome CDS50215 378 - 0.515873
araE SFV_2919 low-affinity L-arabinose transport system proton symport proteinchromosome CDS2988292 1344 - 0.502976
arsB SFV_3514 arsenical pump membrane proteinchromosome CDS3585187 1290 + 0.544186
arsC SFV_3515 arsenate reductasechromosome CDS3586489 426 + 0.521127
bfr SFV_3342 bacterioferrin, an iron storage homoproteinchromosome CDS3400380 477 - 0.417191
btuB SFV_4039 Vitamin B12 receptor precursorchromosome CDS4154790 1890 + 0.498942
btuC SFV_1512 vitamin B12 transport permease proteinchromosome CDS1552439 981 + 0.549439
chaA SFV_1232 sodium-calcium/proton antiporterchromosome CDS1281256 1188 - 0.472222
chaC SFV_1234 cation transport regulatorchromosome CDS1282993 717 + 0.545328
cirA SFV_2230 Colicin I receptor precursorchromosome CDS2260948 1992 - 0.527108
cmr SFV_0827 proton motive force efflux pumpchromosome CDS865089 1227 + 0.522412
corA SFV_3682 Mg2+ transport, system Ichromosome CDS3768142 951 - 0.526814
cutA SFV_4293 Periplasmic divalent cation tolerance protein cutAchromosome CDS4437223 339 - 0.504425
cutC SFV_1912 copper homeostasis proteinchromosome CDS1959129 747 - 0.519411
cutF SFV_0176 copper homeostasis protein (lipoprotein)chromosome CDS205873 711 + 0.513361
cyaY SFV_3695 hypothetical proteinchromosome CDS3780456 321 + 0.538941
cysA SFV_2475 ATP-binding component of sulfate permease A proteinchromosome CDS2530723 1098 - 0.584699
cysC SFV_2748 adenosine 5'-phosphosulfate kinasechromosome CDS2817889 606 + 0.518152
cysI SFV_2742 sulfite reductase, alpha subunitchromosome CDS2809896 1713 + 0.558669
cysJ SFV_2741 sulfite reductase (NADPH), flavoprotein beta subunitchromosome CDS2808097 1800 + 0.56
cysN SFV_2747 ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1chromosome CDS2816462 1428 + 0.539916
cysP SFV_2478 thiosulfate binding proteinchromosome CDS2533518 1017 - 0.530973
cysW SFV_2476 ABC-type sulfate transport system, permease componentchromosome CDS2531810 876 - 0.568493
dgoT SFV_3820 D-galactonate transportchromosome CDS3915124 1320 + 0.529545
dppB SFV_3544 dipeptide transport system permease protein 1chromosome CDS3614449 1020 + 0.561765
dppD SFV_3546 putative ATP-binding component of dipeptide transport systemchromosome CDS3616392 984 + 0.558943
emrB SFV_2818 Multidrug resistance protein Bchromosome CDS2882504 1539 - 0.559454
emrD SFV_3837 Multidrug resistance protein Dchromosome CDS3931728 1191 - 0.565911
emrE SFV_1979 methylviologen resistancechromosome CDS2020664 498 - 0.435743
emrY SFV_2426 multidrug resistance protein Ychromosome CDS2477440 1539 - 0.417154
exuT SFV_3134 transport of hexuronateschromosome CDS3207347 1467 + 0.540559
feoA SFV_3413 ferrous iron transport protein Achromosome CDS3471345 228 + 0.491228
fepA SFV_0529 outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and Dchromosome CDS556294 2241 - 0.542169
fepB SFV_0540 Ferrienterobactin-binding periplasmic protein precursorchromosome CDS570364 957 - 0.560084
fepC SFV_0536 ATP-binding component of ferric enterobactin transportchromosome CDS566212 816 - 0.53799
fepD SFV_0538 ferric enterobactin (enterochelin) transportchromosome CDS568013 1005 - 0.608955
fepG SFV_0537 ferric enterobactin transport proteinchromosome CDS567024 993 - 0.584089
fes SFV_0530 enterochelin esterasechromosome CDS558777 1203 + 0.543641
fhuA SFV_0135 outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80chromosome CDS159015 2166 + 0.512465
fhuB SFV_0138 hydroxamate-dependent iron uptake, cytoplasmic membrane componentchromosome CDS162915 1983 + 0.594554
fhuC SFV_0136 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS161189 840 + 0.559524
fhuD SFV_0137 hydroxamate-dependent iron uptake, cytoplasmic membrane componentchromosome CDS162028 891 + 0.542088
fhuE SFV_1122 outer membrane receptor for ferric iron uptakechromosome CDS1165154 2190 - 0.499087
flhE SFV_1919 flagellar proteinchromosome CDS1964536 339 - 0.557522
focA SFV_0904 probable formate transporter (formate channel 1)chromosome CDS942964 1032 - 0.455426
fsr SFV_0452 fosmidomycin resistance proteinchromosome CDS477547 1221 - 0.521704
ftn SFV_1949 Ferritin 1chromosome CDS1993673 498 + 0.429719
fur SFV_0648 negative regulatorchromosome CDS685568 447 + 0.480984
galP SFV_2997 galactose-proton symport of transport systemchromosome CDS3065155 1395 + 0.532616
glpE SFV_3432 protein of glp regulonchromosome CDS3494528 327 - 0.544343
gntK SFV_3445 Thermoresistant gluconokinasechromosome CDS3511532 528 - 0.505682
gppA SFV_3725 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatasechromosome CDS3810087 1485 + 0.53468
hcaA1 SFV_2586 large terminal subunit of phenylpropionate dioxygenasechromosome CDS2649562 1362 + 0.530103
hcaC SFV_2588 ferredoxin subunit of phenylpropionate dioxygenasechromosome CDS2651438 321 + 0.554517
hcaT SFV_2584 MFS (major facilitator superfamily) transporterchromosome CDS2647237 1140 - 0.564035
hpaX SFV_4378 putative 4-hydroxyphenylacetate permeasechromosome CDS4517127 1356 - 0.463864
hycC SFV_2780 membrane-spanning protein of hydrogenase 3 (part of FHL complex)chromosome CDS2846431 1539 + 0.580247
hyfD SFV_2529 hydrogenase 4 membrane subunitchromosome CDS2588709 1413 + 0.559094
hyfF SFV_2531 hydrogenase 4 membrane subunitchromosome CDS2590788 1593 + 0.542373
imm SFV_3855 putative membrane transport proteinchromosome CDS3956371 1194 + 0.569514
iutA SFV_3850 putative ferric siderophore receptorchromosome CDS3948286 2199 - 0.526603
katE SFV_1488 catalasechromosome CDS1531577 2262 - 0.515031
katG SFV_4012 catalase; hydroperoxidase HPI(I)chromosome CDS4120087 2181 + 0.558001
kch SFV_1262 putative potassium channel proteinchromosome CDS1317988 1254 - 0.42185
kdpA SFV_0635 ATPase of high-affinity potassium transport system, A chainchromosome CDS669105 1650 + 0.54303
kdpC SFV_0637 high-affinity potassium transport systemchromosome CDS672833 573 + 0.546248
kefB SFV_3356 glutathione-regulated potassium-efflux system proteinchromosome CDS3409963 1713 - 0.545826
kefC SFV_0041 glutathione-regulated potassium-efflux system protein KefCchromosome CDS46756 1863 + 0.551798
kgtP SFV_2650 alpha-ketoglutarate permeasechromosome CDS2717969 1299 - 0.487298
kup SFV_3753 low affinity potassium transport systemchromosome CDS3841031 1869 - 0.515784
mdoG SFV_1060 periplasmic glucans biosynthesis proteinchromosome CDS1104687 1527 + 0.498363
mgtA SFV_4250 Mg2+ transport ATPase, P-type 1chromosome CDS4385379 2697 - 0.524657
modA SFV_0577 Molybdate-binding periplasmic protein precursorchromosome CDS605399 774 - 0.510336
modB SFV_0576 molybdate transport permease proteinchromosome CDS604710 690 - 0.53913
modC SFV_0575 ATP-binding component of molybdate transportchromosome CDS603649 1059 - 0.536355
modF SFV_0580 ATP-binding component of molybdate transport systemchromosome CDS607473 1473 + 0.520027
napD SFV_2283 hypothetical proteinchromosome CDS2318448 264 - 0.549242
narK SFV_1239 nitrite extrusion proteinchromosome CDS1288463 1392 + 0.530891
narU SFV_1756 nitrite extrusion protein 2chromosome CDS1795663 1389 + 0.491001
narY SFV_1758 putative cryptic nitrate reductase 2, beta subunitchromosome CDS1800870 933 + 0.533762
nhaA SFV_0014 Na+/H antiporter, pH dependentchromosome CDS16206 1167 + 0.511568
nhaB SFV_1193 Na+/H+ antiporter, pH independentchromosome CDS1233549 1542 - 0.525292
nikA SFV_3479 periplasmic binding protein for nickelchromosome CDS3544602 1575 + 0.533968
nikB SFV_3480 transport of nickel, membrane proteinchromosome CDS3546176 945 + 0.579894
nikC SFV_3481 transport of nickel, membrane proteinchromosome CDS3547117 834 + 0.604317
nikD SFV_3482 ATP-binding protein of nickel transport systemchromosome CDS3547950 765 + 0.592157
nikE SFV_3483 ATP-binding protein of nickel transport systemchromosome CDS3548711 807 + 0.55886
nirC SFV_3373 Nitrite transporterchromosome CDS3428144 807 + 0.548947
nirD SFV_3372 nitrite reductase (NAD(P)H) subunitchromosome CDS3427692 327 + 0.541284
nrfA SFV_4141 Cytochrome c552 precursorchromosome CDS4272428 1470 - 0.52585
nrfD SFV_4138 NrfD proteinchromosome CDS4270196 957 - 0.583072
nuoL SFV_2345 NADH dehydrogenase I chain Lchromosome CDS2393871 1842 - 0.570033
nupG SFV_3023 Nucleoside permease nupGchromosome CDS3085604 1257 + 0.498807
oppB SFV_1256 oligopeptide transport permease proteinchromosome CDS1311871 921 + 0.46797
oppC SFV_1257 oligopeptide transport permease proteinchromosome CDS1312806 909 + 0.528053
oppD SFV_1258 ATP-binding protein of oligopeptide ABC transport systemchromosome CDS1313726 1014 + 0.514793
phnA SFV_4122 hypothetical proteinchromosome CDS4253910 483 + 0.457557
phnC SFV_4124 ATP-binding component of phosphonate transportchromosome CDS4255126 789 + 0.583016
phnD SFV_4125 periplasmic binding protein component of Pn transporterchromosome CDS4255939 1017 + 0.547689
phoA SFV_0346 alkaline phosphatasechromosome CDS363775 1416 + 0.533192
phoU SFV_3783 negative regulator for pho regulon and putative enzyme in phosphate metabolismchromosome CDS3875974 726 + 0.522039
pitA SFV_3505 low-affinity phosphate transportchromosome CDS3574063 1500 + 0.54
ppk SFV_2546 polyphosphate kinasechromosome CDS2606968 2067 + 0.487179
ppx SFV_2547 exopolyphosphatasechromosome CDS2609111 1470 + 0.512245
proP SFV_4119 low-affinity transport system; proline permease IIchromosome CDS4248786 1503 - 0.499002
pspE SFV_1322 phage shock proteinchromosome CDS1377734 348 + 0.502874
pstA SFV_3781 high-affinity phosphate-specific transport systemchromosome CDS3874204 891 + 0.569024
pstB SFV_3782 ATP-binding component of high-affinity phosphate-specific transport systemchromosome CDS3875186 774 + 0.527132
pstC SFV_3780 Phosphate transport system permease protein pstCchromosome CDS3873245 960 + 0.547917
pstS SFV_3779 Phosphate-binding periplasmic protein precursorchromosome CDS3872118 1041 + 0.513929
sapB SFV_1307 peptide transport permease proteinchromosome CDS1362707 966 - 0.509317
sapC SFV_1306 peptide transport permease proteinchromosome CDS1361830 891 - 0.564534
sbp SFV_3577 periplasmic sulfate-binding proteinchromosome CDS3656569 990 - 0.510101
sitA SFV_1379 Iron transport protein, periplasmic-binding proteinchromosome CDS1426580 915 - 0.479781
sitB SFV_1378 Iron transport protein, ATP-binding componentchromosome CDS1425753 828 - 0.514493
sitD SFV_1376 Iron transport protein, inner membrane componentchromosome CDS1424045 858 - 0.493007
sodA SFV_3587 superoxide dismutase, manganesechromosome CDS3666296 621 - 0.536232
sodB SFV_1678 superoxide dismutase, ironchromosome CDS1714527 582 + 0.498282
sodC SFV_1666 superoxide dismutase precursor (Cu-Zn)chromosome CDS1701676 522 - 0.530651
spy SFV_1477 periplasmic proteinchromosome CDS1522283 486 + 0.50823
sugE SFV_4307 suppresses groEL, may be chaperonechromosome CDS4449706 468 + 0.527778
tauA SFV_0329 taurine transport system periplasmic proteinchromosome CDS348610 771 + 0.560311
tauB SFV_0330 taurine ATP-binding component of a transport systemchromosome CDS349393 768 + 0.559896
tauC SFV_0331 taurine transport system permease proteinchromosome CDS350157 828 + 0.583333
tehA SFV_1777 tellurite resistancechromosome CDS1817714 993 - 0.530715
trkA SFV_3309 transport of potassiumchromosome CDS3381226 1377 + 0.498911
trkH SFV_3651 Trk system potassium uptake protein trkHchromosome CDS3736121 1452 - 0.525482
yaaU SFV_0039 putative transport proteinchromosome CDS44791 1395 + 0.522581
yadF SFV_0117 putative carbonic anhdrasechromosome CDS139774 663 - 0.508296
yadQ SFV_0140 putative channel transporterchromosome CDS166437 1422 + 0.537271
yadT SFV_0143 hypothetical proteinchromosome CDS168992 828 - 0.527778
yaeC SFV_0181 putative lipoproteinchromosome CDS210670 816 - 0.485294
yajK SFV_0388 putative oxidoreductasechromosome CDS405020 1449 + 0.516218
yajR SFV_0394 putative transport proteinchromosome CDS412823 1371 - 0.516411
ybaL SFV_0451 putative transport proteinchromosome CDS475633 1677 - 0.550984
ybaR SFV_0457 putative ATPasechromosome CDS482844 2505 - 0.58004
ybdA SFV_0539 putative transportchromosome CDS569128 1233 + 0.570154
ybdE SFV_0515 putative inner membrane component for iron transportchromosome CDS541557 3180 + 0.55566
ybdS SFV_0565 putative a membrane proteinchromosome CDS594327 1464 - 0.506831
ybeX SFV_0669 putative transport proteinchromosome CDS704421 879 + 0.516496
ybgR SFV_0588 putative transport system permease proteinchromosome CDS616448 942 + 0.528662
ybhI SFV_0753 putative membrane pump proteinchromosome CDS780866 1434 + 0.493724
ybiR SFV_0801 hypothetical proteinchromosome CDS833688 1119 + 0.520107
ybjM SFV_0833 hypothetical proteinchromosome CDS871499 378 + 0.489418
ycaD SFV_0889 putative transportchromosome CDS931379 1149 + 0.517842
ycbM SFV_0936 putative transport system permease proteinchromosome CDS986369 654 - 0.536697
ycbO SFV_0940 hypothetical proteinchromosome CDS989650 1002 - 0.523952
yccK SFV_0978 putative sulfite reductasechromosome CDS1026900 387 - 0.459948
ycdB SFV_1030 hypothetical proteinchromosome CDS1075324 1266 + 0.538705
ycdO SFV_1029 hypothetical proteinchromosome CDS1074191 1128 + 0.515071
yceL SFV_1087 hypothetical proteinchromosome CDS1129948 1209 - 0.55335
ychM SFV_1220 hypothetical proteinchromosome CDS1268727 1653 - 0.546884
ychN SFV_1235 hypothetical proteinchromosome CDS1283753 354 - 0.516949
ydcG SFV_1781 putative glycoproteinchromosome CDS1820768 1626 - 0.510455
ydeF SFV_1594 putative transport proteinchromosome CDS1627210 1119 + 0.495085
ydhC SFV_1682 putative transport proteinchromosome CDS1719044 1212 + 0.533003
yebI SFV_1861 hypothetical proteinchromosome CDS1907906 786 + 0.510178
yebL SFV_1860 putative adhesinchromosome CDS1906143 1059 - 0.474976
yebM SFV_1859 putative ATP-binding component of a transport systemchromosome CDS1907154 756 + 0.488095
yecI SFV_1945 ferritin-like proteinchromosome CDS1991881 504 + 0.482143
yegB SFV_2138 putative transport proteinchromosome CDS2171282 1284 + 0.555296
yegT SFV_2153 putative nucleoside permease proteinchromosome CDS2186628 1278 + 0.501565
yeiO SFV_2245 putative transportchromosome CDS2279983 1179 + 0.531807
yejA SFV_2255 hypothetical proteinchromosome CDS2289260 1815 + 0.506336
yfbS SFV_2359 putative transport proteinchromosome CDS2410192 1758 - 0.525028
yfdC SFV_2415 putative transportchromosome CDS2467384 933 + 0.483387
yffB SFV_2515 hypothetical proteinchromosome CDS2575119 357 + 0.470588
ygaP SFV_2835 hypothetical proteinchromosome CDS2898619 525 - 0.460952
ygcS SFV_2682 putative transport proteinchromosome CDS2757273 1338 + 0.529895
ygeD SFV_2913 putative resistance proteinschromosome CDS2979997 1146 - 0.558464
ygiE SFV_3084 hypothetical proteinchromosome CDS3149428 774 + 0.533592
ygjE SFV_3103 hypothetical proteinchromosome CDS3168914 1464 + 0.555328
ygjT SFV_3129 putative transport proteinchromosome CDS3200673 966 + 0.541408
ygjV SFV_3131 hypothetical proteinchromosome CDS3203483 552 - 0.5
yhaU SFV_3167 putative transport proteinchromosome CDS3239997 1287 - 0.51049
yheA SFV_3343 hypothetical proteinchromosome CDS3400929 195 - 0.451282
yheL SFV_3348 hypothetical proteinchromosome CDS3405839 288 - 0.5
yheM SFV_3349 hypothetical proteinchromosome CDS3406134 360 - 0.494444
yheN SFV_3350 hypothetical proteinchromosome CDS3406493 387 - 0.55814
yhfC SFV_3370 putative transportchromosome CDS3423709 1182 + 0.514382
yhhS SFV_3476 putative transportchromosome CDS3541449 1260 - 0.557936
yhjA SFV_3990 putative cytochrome C peroxidasechromosome CDS4096765 1398 - 0.484979
yhjE SFV_3565 putative transport proteinchromosome CDS3644732 1323 - 0.560091
yibN SFV_3920 hypothetical proteinchromosome CDS4022413 432 + 0.5
yidG SFV_3835 hypothetical proteinchromosome CDS3930864 363 + 0.506887
yidJ SFV_3832 putative sulfatasechromosome CDS3928516 1443 + 0.517672
yidY SFV_3803 putative transport proteinchromosome CDS3894096 1176 - 0.528061
yieL SFV_3788 putative xylanasechromosome CDS3883050 1101 + 0.506812
yieO SFV_3745 putative transport proteinchromosome CDS3832855 1404 + 0.492165
yihN SFV_3626 putative resistance protein (transport)chromosome CDS3705574 1059 - 0.449481
yiiO SFV_3580 Uncharacterized periplasmic proteinchromosome CDS3660071 501 - 0.500998
yjaI SFV_4074 hypothetical proteinchromosome CDS4191428 567 - 0.516755
yjbB SFV_4091 putative alpha helix proteinchromosome CDS4217467 1632 + 0.558211
yjbK SFV_4167 putative regulatorchromosome CDS4302204 576 + 0.522569
yjcB SFV_4152 hypothetical proteinchromosome CDS4286379 351 + 0.535613
yjcE SFV_4147 hypothetical proteinchromosome CDS4279702 1650 - 0.556364
yjiZ SFV_4387 putative transport proteinchromosome CDS4526733 1362 - 0.516887
yrbG SFV_3226 hypothetical proteinchromosome CDS3296113 966 + 0.517598
zntA SFV_3472 zinc-transporting ATPasechromosome CDS3537384 2199 + 0.579354