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2024-05-18 06:28:04

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2

Number of genes found: 253

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Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t1137 putative ABC transport ATP-binding subunitchromosome CDS1210485 591 + 0.573604
NA t1464 putative multidrug efflux proteinchromosome CDS1508319 1242 - 0.496779
NA t4566 hypothetical proteinchromosome CDS4716144 1185 - 0.562025
NA t4477 hypothetical proteinchromosome CDS4623943 777 + 0.563707
NA t2117 ABC transporter permease (FecCD_family)chromosome CDS2180997 1080 - 0.559259
NA t1149 hypothetical proteinchromosome CDS1218578 363 + 0.509642
NA t0037 putative secreted sulfatasechromosome CDS40128 1494 + 0.525435
NA t1653 possible membrane transport proteinchromosome CDS1710213 837 - 0.477897
NA t0412 hypothetical proteinchromosome CDS485970 900 + 0.552222
NA t1556 putative multidrug transporterchromosome CDS1614845 339 - 0.430678
NA t1428 putative membrane transport proteinchromosome CDS1472823 1380 + 0.501449
NA t1076 cell volume regulation protein CvrAchromosome CDS1157987 1734 - 0.546713
NA t2508 putative metabolite transport proteinchromosome CDS2586391 1254 - 0.54067
NA t3687 putative membrane transport proteinchromosome CDS3799074 1263 - 0.476643
NA t1879 putative bacteriophage proteinchromosome CDS1938627 651 - 0.482335
NA t2693 hypothetical proteinchromosome CDS2785102 528 + 0.558712
NA t0283 putative transmembrane transport proteinchromosome CDS320152 1197 + 0.466165
NA t3063 possible ABC-transport protein, periplasmic-binding componentchromosome CDS3147460 1053 - 0.536562
NA t2565 hypothetical proteinchromosome CDS2641777 261 - 0.371648
NA t4568 putative sugar transport proteinchromosome CDS4718906 1242 - 0.572464
NA t3605 hypothetical proteinchromosome CDS3705287 693 + 0.393939
NA t2206 haemolysin-related proteinchromosome CDS2271719 879 + 0.517634
NA t1227 hypothetical proteinchromosome CDS1293494 192 - 0.510417
NA t2543 probable secreted proteinchromosome CDS2620356 408 + 0.465686
NA t2993 possible ABC-transport protein, ATP-binding componentchromosome CDS3083747 684 + 0.559942
NA t1187 hypothetical proteinchromosome CDS1256434 486 + 0.493827
NA t0573 putative transport proteinchromosome CDS648957 1290 + 0.54186
NA t3946 heavy metal-transporting ATPasechromosome CDS4086002 2199 - 0.602547
NA t3271 possible membrane transport proteinchromosome CDS3362888 1353 - 0.513673
NA t2992 hypothetical proteinchromosome CDS3083091 675 + 0.6
NA t1754 putative membrane transporterchromosome CDS1818639 1209 + 0.56493
NA t1407 putative membrane transport proteinchromosome CDS1451133 1254 - 0.551834
NA t1560 putative membrane transport proteinchromosome CDS1620817 984 - 0.533537
NA t0531 putative sodium/sulphate transporterchromosome CDS603869 1827 + 0.558292
NA t0362 putative arsenate reductasechromosome CDS431300 360 - 0.566667
NA t1890 putative bacteriophage proteinchromosome CDS1946665 498 - 0.556225
NA t2340 probable metabolite transport proteinchromosome CDS2405549 1248 - 0.459936
NA t3231 hypothetical proteinchromosome CDS3319992 978 + 0.554192
NA t0584 putative transmembrane transport proteinchromosome CDS660678 1191 + 0.493703
NA t1531 hypothetical proteinchromosome CDS1585323 1626 - 0.552891
NA t2438 thiamine biosynthesis protein ThiIchromosome CDS2509576 1449 - 0.52864
NA t1403 hypothetical proteinchromosome CDS1448322 330 + 0.554545
NA t2028 hypothetical proteinchromosome CDS2084860 1212 + 0.572607
NA t1678 hypothetical proteinchromosome CDS1743265 354 + 0.516949
NA t0676 putative n-hydroxybenzoate transporterchromosome CDS761598 1359 + 0.588668
NA t1095 putative sulphate transporterchromosome CDS1179012 1686 - 0.568802
NA t1158 hypothetical proteinchromosome CDS1222785 1185 - 0.579747
NA t4466 putative sugar transporterchromosome CDS4613958 1209 - 0.473118
NA t2485 hypothetical proteinchromosome CDS2556083 216 - 0.490741
NA t1069 hypothetical proteinchromosome CDS1150037 342 - 0.51462
NA t3111 zinc transporter ZupTchromosome CDS3196083 774 + 0.55814
NA t3144 possible drug efflux proteinchromosome CDS3235268 969 + 0.524252
NA t2709 putative transmembrane transport proteinchromosome CDS2798192 1185 + 0.592405
NA t1135 putative inner membrane transport proteinchromosome CDS1207921 978 + 0.53272
NA t3941 hypothetical proteinchromosome CDS4081207 1218 + 0.592775
NA t1411 putative voltage-gated ClC-type chloride channel ClcBchromosome CDS1455530 1290 - 0.582946
NA t3134 hypothetical proteinchromosome CDS3222154 768 - 0.55599
NA t0492 hypothetical proteinchromosome CDS563921 1179 + 0.608142
NA t1003 putative cation transporterchromosome CDS1091303 876 + 0.522831
NA t1402 putative conserved membrane proteinchromosome CDS1447973 363 + 0.449036
NA t1437 hypothetical proteinchromosome CDS1482671 1188 - 0.51936
NA t0086 puatative sulfatasechromosome CDS96041 1305 + 0.472031
NA t2116 ABC transporter ATP-binding proteinchromosome CDS2180221 777 - 0.563707
NA t1643 hypothetical proteinchromosome CDS1702408 879 + 0.536974
NA t3816 putative secreted proteinchromosome CDS3937320 432 + 0.497685
NA t3086 possible membrane transport proteinchromosome CDS3167607 1455 + 0.55945
NA t4175 putative sodium/hydrogen exchanger family proteinchromosome CDS4337375 1692 + 0.556147
NA t2812 possible membrane transport proteinchromosome CDS2889604 1209 - 0.542597
NA t1462 membrane transport proteinchromosome CDS1505230 1287 - 0.462315
NA t3353 hypothetical proteinchromosome CDS3455339 354 + 0.502825
NA t1788 putative sialic acid transporterchromosome CDS1847804 1281 - 0.45121
NA t2482 possible efflux pumpchromosome CDS2552804 1200 - 0.5225
NA t2994 possible ABC-transport protein, ATP-binding componentchromosome CDS3084424 657 + 0.595129
NA t2427 hypothetical major facilitator family transport proteinchromosome CDS2499173 1365 + 0.554579
NA t1497 probable TonB-dependent receptorchromosome CDS1549539 2121 + 0.532296
NA t0453 hypothetical proteinchromosome CDS523734 1236 - 0.591424
NA t2862 possible secreted proteinchromosome CDS2940621 1119 + 0.409294
NA t0406 hypothetical proteinchromosome CDS482043 330 - 0.442424
NA t2915 hypothetical proteinchromosome CDS3006398 714 + 0.504202
NA t1134 putative inner membrane transport proteinchromosome CDS1208888 813 + 0.565806
NA t1835 hypothetical protein in helD-serT intergenic regionchromosome CDS1896886 330 + 0.506061
NA t2515 possible outer membrane proteinchromosome CDS2590325 525 - 0.413333
NA t0714 putative nucleoside permeasechromosome CDS800811 1272 - 0.512579
NA t3934 hypothetical proteinchromosome CDS4071805 1293 - 0.481052
NA t3062 hypothetical proteinchromosome CDS3146750 714 - 0.588235
NA t2010 probable sulfatasechromosome CDS2068937 1488 - 0.515457
NA t0087 hypothetical proteinchromosome CDS97342 312 + 0.403846
abc t0250 putative ABC transporter ATP-binding proteinchromosome CDS285312 1032 - 0.526163
ampG t2416 AmpG proteinchromosome CDS2488878 1476 + 0.565718
amtB t2396 probable ammonium transporterchromosome CDS2466060 1287 - 0.557887
apaG t0092 hypothetical proteinchromosome CDS102078 378 - 0.539683
araE t2926 L-arabinose isomerasechromosome CDS3018653 1416 - 0.524011
bcr t0633 bicyclomycin resistance proteinchromosome CDS714654 1191 + 0.538203
bfr t4062 bacterioferritinchromosome CDS4216300 477 + 0.425577
btuF t0207 vitamin B12-transporter protein BtuFchromosome CDS238268 801 - 0.555556
cbiN t0852 cobalt transport protein CbiNchromosome CDS944229 282 + 0.5
cbiO t0854 putative cobalt transport ATP-binding protein CbiOchromosome CDS945183 816 + 0.523284
cbiQ t0853 putative cobalt transport protein CbiQchromosome CDS944497 678 + 0.538348
chaA t1680 putative calcium/proton antiporterchromosome CDS1744195 1101 + 0.503179
cirA t0656 colicin I receptor precursorchromosome CDS739814 1992 + 0.545683
citA t2186 citrate-proton symporterchromosome CDS2252410 1305 + 0.54023
citT t2249 citrate carrierchromosome CDS2313832 1536 + 0.536458
corA t3345 magnesium and cobalt transport proteinchromosome CDS3446026 951 - 0.536278
corB t2634 hypothetical proteinchromosome CDS2710719 1242 + 0.529791
cpxP t3559 extracytoplasmic stress protein for protein-mediated toxicitieschromosome CDS3659998 501 - 0.506986
cutA t4375 periplasmic divalent cation tolerance protein CutAchromosome CDS4528457 348 - 0.522988
cutC t0970 putative copper homeostasis proteinchromosome CDS1059750 780 + 0.537179
cutF t0243 copper homeostasis protein CutF precursorchromosome CDS279270 702 + 0.551282
cyaY t3354 frataxin-like proteinchromosome CDS3455762 321 + 0.554517
cysA t0417 sulphate transport ATP-binding protein CysAchromosome CDS490769 1095 + 0.587215
cysC t2834 adenylylsulfate kinasechromosome CDS2907780 606 - 0.541254
cysI t2848 sulfite reductase (NADPH) hemoprotein alpha subunitchromosome CDS2923723 1713 - 0.569177
cysJ t2849 sulfite reductase (NADPH) flavoprotein beta subunitchromosome CDS2925435 1800 - 0.576667
cysN t2835 sulfate adenylyltransferase subunit 1chromosome CDS2908372 1440 - 0.547917
cysP t0414 thiosulphate-binding protein precursorchromosome CDS488055 1017 + 0.536873
cysQ t4457 CysQ proteinchromosome CDS4603045 741 + 0.568151
cysW t0416 sulphate transport system permease protein CysWchromosome CDS489904 876 + 0.545662
dppB t3886 dipeptide transport system permease protein DppBchromosome CDS4013588 1020 + 0.568627
dppC t3887 dipeptide transport system permease protein DppCchromosome CDS4014617 903 + 0.601329
dppD t3888 dipeptide transport ATP-binding protein DppDchromosome CDS4015530 984 + 0.559959
dps t2057 DNA protection during starvation conditionschromosome CDS2119288 504 + 0.484127
emrB t2712 multidrug resistance protein Bchromosome CDS2801719 1539 + 0.569851
emrD t3719 multidrug resistance protein Dchromosome CDS3833345 1185 - 0.583122
exuT t3055 hexuronate transporterchromosome CDS3135808 1305 - 0.526437
feoA t4001 putative ferrous iron transport proteinchromosome CDS4151121 228 - 0.504386
feoB t4000 ferrous iron transport protein Bchromosome CDS4148784 2319 - 0.564467
fepA t2283 ferrienterobactin receptor precursorchromosome CDS2353169 2256 + 0.54078
fepB t2274 ferrienterobactin-binding periplasmic protein precursorchromosome CDS2341036 957 + 0.575758
fepC t2278 ferric enterobactin transport ATP-binding protein FepCchromosome CDS2345403 795 + 0.567296
fepD t2276 ferric enterobactin transport protein FepDchromosome CDS2343410 1008 + 0.612103
fepG t2277 ferric enterobactin transport protein FepGchromosome CDS2344417 990 + 0.6
fes t2282 enterochelin esterasechromosome CDS2351766 1215 - 0.597531
fhuB t0202 ferrichrome transport protein FhuB precursorchromosome CDS232062 2058 + 0.608358
fhuC t0200 ferrichrome transport ATP-binding protein FhuCchromosome CDS230378 798 + 0.590226
fhuD t0201 ferrichrome-binding periplasmic protein precursorchromosome CDS231175 891 + 0.590348
fieF t3558 ferrous iron efflux protein Fchromosome CDS3658954 897 - 0.526198
focA t1960 probable formate transporterchromosome CDS2012271 858 + 0.482517
foxA t2500 ferrioxamine B receptor precursorchromosome CDS2574766 2091 - 0.527499
fsr t2367 fosmidomycin resistance proteinchromosome CDS2434614 1221 + 0.552007
ftnA t0943 ferritinchromosome CDS1032366 498 - 0.457831
fur t2182 ferric uptake regulatorchromosome CDS2248239 453 + 0.476821
galP t3003 galactose-proton symportchromosome CDS3094519 1395 + 0.551971
glpE t3988 thiosulfate sulfurtransferasechromosome CDS4133461 327 + 0.547401
gppA t3383 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatasechromosome CDS3483979 1482 + 0.555331
hcaT t0302 putative 3-phenylpropionate permeasechromosome CDS347253 1140 + 0.578947
hpaX t1812 putative 4-hydroxyphenylacetate permeasechromosome CDS1875312 1377 - 0.532317
hycC t2753 NADH dehydrogenase subunit Nchromosome CDS2835294 1827 - 0.613027
iroD t2670 putative ferric enterochelin esterasechromosome CDS2760268 1245 + 0.617671
iroN t2672 TonB-dependent outer membrane siderophore receptor proteinchromosome CDS2762521 2181 - 0.508482
katE t1198 catalase HPIIchromosome CDS1265703 2253 - 0.539725
katG t3510 catalasechromosome CDS3606678 2181 - 0.578175
kdgT t0166 2-keto-3-deoxygluconate permeasechromosome CDS192379 954 + 0.57652
kdpA t2169 potassium-transporting ATPase subunit Achromosome CDS2231519 1680 + 0.570238
kdpB t2170 potassium-transporting ATPase B chainchromosome CDS2233219 1710 + 0.58538
kdpC t2171 potassium-transporting ATPase subunit Cchromosome CDS2234934 588 + 0.596939
kefB t4048 glutathione-regulated potassium-efflux system proteinchromosome CDS4205136 1806 + 0.549834
kefC t0089 glutathione-regulated potassium-efflux system proteinchromosome CDS98583 1863 + 0.578637
kgtP t0256 alpha-ketoglutarate permeasechromosome CDS293573 1302 + 0.517665
kup t3639 membrane transport proteinchromosome CDS3743252 1869 - 0.53237
mdfA t2030 multidrug translocase MdfAchromosome CDS2086937 1233 - 0.549067
mdoG t1770 periplasmic glucans biosynthesis protein MdoG precursorchromosome CDS1832954 1536 - 0.510417
mgtA t4491 Mg(2+) transport ATPase, P-typechromosome CDS4638655 2709 + 0.550757
mgtB t3755 Magnesium transport ATPase, P-type 2chromosome CDS3870018 2727 + 0.525119
mntH t0449 putative manganese transport protein MntHchromosome CDS519142 1242 + 0.550725
modA t2106 molybdate-binding periplasmic protein precursorchromosome CDS2170045 774 - 0.550388
modB t2105 molybdate transport permease proteinchromosome CDS2169356 690 - 0.591304
modC t2104 molybdenum transport ATP-binding protein ModCchromosome CDS2168295 1059 - 0.555241
modF t2109 putative molybdenum transport ATP-binding protein ModFchromosome CDS2172119 1476 + 0.549458
nanT t3255 putative sialic acid transporterchromosome CDS3346518 1491 - 0.549296
narK t1674 nitrite extrusion proteinchromosome CDS1737487 1398 - 0.545064
narU t1487 nitrite extrusion proteinchromosome CDS1535593 1389 + 0.521238
nhaA t0041 Na(+)/H(+) antiporter 1chromosome CDS46186 1167 + 0.563839
nhaB t1071 regulator of intracellular pHchromosome CDS1151158 1545 - 0.530744
nirC t4029 putative nitrite transporterchromosome CDS4186823 810 - 0.560494
nirD t4030 nitrite reductase small subunitchromosome CDS4187814 327 - 0.565749
nrfA t4183 cytochrome c552 precursorchromosome CDS4345872 1437 + 0.545581
nrfD t4186 cytochrome c-type biogenesis proteinchromosome CDS4348651 957 + 0.588297
nuoL t0546 NADH dehydrogenase subunit Lchromosome CDS620185 1842 + 0.579262
nupG t3026 nucleoside permeasechromosome CDS3113345 1257 + 0.512331
oppB t1657 oligopeptide permease ABC transporter membrane componentchromosome CDS1714039 921 - 0.508143
oppD t1655 oligopeptide transporter ATP-binding componentchromosome CDS1712098 1008 - 0.521825
pgtC t0460 phosphoglycerate transport regulatory protein PgtC precursorchromosome CDS533081 1194 + 0.539364
phnA t4196 hypothetical proteinchromosome CDS4359935 336 - 0.497024
phnS t2434 probable periplasmic binding component of 2-aminoethylphosphonate transporterchromosome CDS2505741 1014 + 0.563116
phoU t3670 phosphate transport system regulatory proteinchromosome CDS3779234 726 + 0.557851
pitA t3927 putative low-affinity inorganic phosphate transporterchromosome CDS4064821 1497 - 0.536406
ppk t0356 polyphosphate kinasechromosome CDS424131 2067 - 0.497339
ppx t0355 exopolyphosphatasechromosome CDS422585 1542 - 0.538911
proP t4197 ProP proteinchromosome CDS4360738 1503 + 0.529607
pspE t1591 phage shock protein E precursorchromosome CDS1651866 315 - 0.434921
pstA t3668 phosphate transport system permease proteinchromosome CDS3777469 891 + 0.560045
pstB t3669 phosphate transport ATP-binding proteinchromosome CDS3778446 774 + 0.520672
pstC t3667 phosphate transport system permease proteinchromosome CDS3776510 960 + 0.552083
pstS t3666 periplasmic phosphate-binding proteinchromosome CDS3775334 1041 + 0.538905
rfc t1212 O-antigen polymerasechromosome CDS1278530 1224 - 0.33415
sbp t3556 periplasmic sulphate binding proteinchromosome CDS3656614 990 - 0.524242
sfbA t2350 lipoproteinchromosome CDS2415935 831 - 0.530686
sfbB t2349 ABC transporter ATP-binding proteinchromosome CDS2414882 1017 - 0.561455
sfbC t2348 ABC transporter integral membrane proteinchromosome CDS2414230 660 - 0.542424
sitA t2763 iron transport protein, periplasmic-binding proteinchromosome CDS2845119 918 + 0.538126
sitB t2764 iron transport protein, ATP-binding componentchromosome CDS2846033 822 + 0.540146
sitC t2765 iron transport protein, inner membrane componentchromosome CDS2846851 861 + 0.5482
sitD t2766 iron transport protein, inner membrane componentchromosome CDS2847702 849 + 0.507656
smvA t1485 methyl viologen resistance protein SmvAchromosome CDS1533195 1488 - 0.579301
sodA t3564 manganese superoxide dismutasechromosome CDS3663934 621 - 0.539452
sodB t1299 superoxide dismutasechromosome CDS1363818 582 - 0.513746
sodC t1308 copper-zinc superoxide dismutasechromosome CDS1370455 522 + 0.557471
sseA t0323 putative thiosulfate sulfurtransferasechromosome CDS366880 843 - 0.590747
sugE t4390 SugE proteinchromosome CDS4540895 318 + 0.531447
tcfA t2550 putative fimbrial proteinchromosome CDS2628639 711 - 0.488045
tehA t1518 tellurite resistance protein TehAchromosome CDS1574433 1014 - 0.545365
thiP t0111 thiamin ABC transporter membrane componentchromosome CDS125507 1611 - 0.594662
trkA t4095 potassium transporter peripheral membrane componentchromosome CDS4233003 1377 - 0.511983
trkH t3312 trk system potassium uptake proteinchromosome CDS3410037 1452 - 0.533058
ttrC t1252 tetrathionate reductase subunit Cchromosome CDS1323878 1023 - 0.557185
xapB t0436 xanthosine permeasechromosome CDS509300 1257 + 0.48926
yaaU t0080 putative metabolite transport proteinchromosome CDS91987 1341 + 0.541387
yadF t0176 carbonic anhydrasechromosome CDS203589 663 - 0.506787
yadQ t0204 chloride channel proteinchromosome CDS235660 1422 + 0.57173
yaeC t0248 putative lipoprotein precursorchromosome CDS283812 816 - 0.48652
yaeE t0249 putative ABC transporter permease proteinchromosome CDS284666 639 - 0.536776
ybaL t2368 putative transport proteinchromosome CDS2436049 1677 + 0.570066
ybaR t2362 copper-transporting ATPasechromosome CDS2427431 2502 + 0.590727
ybdA t2275 hypothetical membrane protein p43chromosome CDS2342055 1245 - 0.590361
ybgR t2120 zinc transporter ZitBchromosome CDS2184098 939 + 0.548456
ybiR t2051 hypothetical proteinchromosome CDS2112712 1113 - 0.543576
ycaD t1966 putative MFS family transporter proteinchromosome CDS2019805 1149 - 0.516971
yceE t1766 putative membrane transport proteinchromosome CDS1828446 1215 + 0.548148
ydhC t1296 putative integral membrane transport proteinchromosome CDS1360078 1206 - 0.544776
yebI t0984 high-affinity zinc uptake system membrane proteinchromosome CDS1071866 786 - 0.552163
yebL t0986 high-affinity zinc uptake system periplasmic binding proteinchromosome CDS1073467 960 + 0.504167
yecI t0945 ferritin-like proteinchromosome CDS1033769 504 - 0.488095
yegB t0743 putative transporter proteinchromosome CDS822836 1413 - 0.542109
yeiO t0648 sugar efflux transporterchromosome CDS729451 1182 - 0.541455
yfdC t0471 hypothetical proteinchromosome CDS543995 942 - 0.497877
yffB t0377 hypothetical proteinchromosome CDS446846 357 - 0.521008
ygcZ t2871 probable glucarate transporterchromosome CDS2954671 1359 - 0.518028
ygeD t2918 hypothetical proteinchromosome CDS3008818 1203 - 0.584372
yheA t4061 bacterioferritin-associated ferredoxinchromosome CDS4216033 195 + 0.420513
yheL t4056 hypothetical proteinchromosome CDS4211028 288 + 0.527778
yheM t4055 hypothetical proteinchromosome CDS4210664 357 + 0.537815
yheN t4054 hypothetical proteinchromosome CDS4210278 387 + 0.573643
yhfC t4032 hypothetical proteinchromosome CDS4190997 1182 - 0.546531
yhjA t3698 probable cytochrome c peroxidasechromosome CDS3814219 1401 + 0.483226
yhjE t3908 hypothetical metabolite transport proteinchromosome CDS4043690 1323 - 0.582766
yidY t3676 putative membrane transport proteinchromosome CDS3784695 1188 - 0.553872
yjbB t4116 hypothetical proteinchromosome CDS4259319 1632 + 0.560662
yliC t2039 hypothetical ABC transporter permease proteinchromosome CDS2096219 921 - 0.547231
yliD t2038 hypothetical ABC transporter permease proteinchromosome CDS2095305 912 - 0.555921
yojF t0603 putative napAB assembly proteinchromosome CDS688598 264 + 0.55303
yojI t0601 putative ABC transporter ATP-binding proteinchromosome CDS685357 1644 + 0.55292
znuC t0985 high-affinity zinc uptake system ATP-binding proteinchromosome CDS1072648 756 - 0.530423
zur t4147 zinc uptake regulation proteinchromosome CDS4291574 516 - 0.562016