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2024-05-18 11:05:37

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Shigella flexneri 2a str. 301, 301

Number of genes found: 244

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SF0782 putative transport system permease proteinchromosome CDS816053 912 + 0.528509
NA SF1194 putative ATP-binding protein of ABC transporterchromosome CDS1237762 1023 - 0.540567
NA SF1552 similar to low-affinity transport protein; proline permease IIchromosome CDS1583809 981 + 0.478084
NA SF2539 putative oxidoreductasechromosome CDS2605768 360 + 0.522222
NA SF2484 hypothetical proteinchromosome CDS2545582 900 - 0.558889
NA SF1448 putative transport proteinchromosome CDS1482521 1380 + 0.49058
NA SF0781 putative transport system permease proteinchromosome CDS815130 921 + 0.533116
NA SF0931 similar to taurine transport system permease proteinchromosome CDS979430 654 - 0.535168
NA SF2842 putative transport proteinchromosome CDS2930782 714 + 0.495798
NA SF1720 putative transport system permease proteinchromosome CDS1754046 1146 + 0.446771
NA SF1193 putative iron compound ABC transporter permease proteinchromosome CDS1236782 981 - 0.541284
NA SF2455 hypothetical proteinchromosome CDS2512469 1257 + 0.538584
NA SF1741 putative ATP-binding component of a transport systemchromosome CDS1778364 987 + 0.541033
NA SF2917 putative ATP-binding protein of ABC transport systemchromosome CDS3010555 678 + 0.529499
NA SF1019 putative cytochromechromosome CDS1064943 609 + 0.563218
NA SF0798 putative DEOR-type transcriptional regulatorchromosome CDS831548 1209 - 0.544251
NA SF1397 putative transport proteinchromosome CDS1437872 1485 - 0.513131
NA SF2916 putative ATP-binding protein of ABC transport systemchromosome CDS3009884 678 + 0.542773
NA SF0233 hypothetical proteinchromosome CDS256552 345 - 0.443478
NA SF1827 hypothetical proteinchromosome CDS1866091 984 - 0.520325
NA SF2708 hypothetical proteinchromosome CDS2782211 960 + 0.548958
NA SF1762 nitrate reductase 1, beta subunitchromosome CDS1801546 933 + 0.533762
NA SF3992 hypothetical proteinchromosome CDS4120936 369 + 0.479675
NA SF1980 resistance proteinchromosome CDS2011993 333 - 0.432432
NA SF1192 putative ferric enterobactin transport ATP-binding proteinchromosome CDS1236027 759 - 0.540184
NA SF1613 putative voltage-gated ClC-type chloride channel ClcBchromosome CDS1639884 1317 + 0.538345
NA SF1620 possible chaperonechromosome CDS1647458 330 - 0.518182
NA SF1181 cell volume regulation protein CvrAchromosome CDS1225833 1611 - 0.535071
NA SF1742 similar to ATP-binding protein of oligopeptide ABC transport systemchromosome CDS1779343 771 + 0.538262
NA SF1721 putative amino acid/amine transport proteinchromosome CDS1755485 1161 + 0.459087
NA SF0979 Hydrogenase-1 operon proteinchromosome CDS1025494 540 + 0.564815
NA SF1621 possible chaperonechromosome CDS1647774 366 - 0.42623
NA SF1830 similar to multidrug resistant proteinchromosome CDS1869399 1455 - 0.421993
NA SF0698 putative DNA packaging protein of prophage; terminase small subunitchromosome CDS725857 324 + 0.447531
NA SF2802 putative transport proteinchromosome CDS2879734 1368 - 0.520468
NA SF2398 hypothetical proteinchromosome CDS2447054 1179 - 0.569126
NA SF0667 putative bacteriophage proteinchromosome CDS701773 357 - 0.546219
abc SF0190 ATP-binding component of a transporterchromosome CDS212511 1032 - 0.523256
ampG SF0377 beta-lactamase induction signal transducer AmpGchromosome CDS387169 1476 - 0.542683
amtB SF0396 probable ammonium transporterchromosome CDS408059 1287 + 0.555556
apaG SF0047 hypothetical proteinchromosome CDS50547 378 - 0.518519
araE SF2851 low-affinity L-arabinose transport system proton symport proteinchromosome CDS2941125 1419 - 0.512333
arsB SF3535 arsenical pump membrane proteinchromosome CDS3625401 1290 + 0.544961
arsC SF3536 arsenate reductasechromosome CDS3626703 426 + 0.521127
bcr SF2269 bicyclomycin resistance protein; transmembrane proteinchromosome CDS2301773 1191 - 0.530647
bfr SF3355 bacterioferrinchromosome CDS3438497 477 - 0.417191
chaA SF1219 sodium-calcium/proton antiporterchromosome CDS1266562 1101 - 0.485922
chaC SF1221 cation transport regulatorchromosome CDS1268298 717 + 0.545328
cmr SF0795 chloramphenicol resistance pump Cmrchromosome CDS829096 1227 + 0.521597
corA SF3894 Mg2+ transport, system Ichromosome CDS4014570 951 + 0.526814
cutA SF4291 divalent cation tolerance proteinchromosome CDS4468638 339 - 0.501475
cutC SF1915 copper homeostasis proteinchromosome CDS1952015 441 - 0.498866
cutF SF0183 copper homeostasis protein (lipoprotein)chromosome CDS206213 711 + 0.513361
cyaY SF3880 frataxin-like proteinchromosome CDS4002106 321 - 0.535826
cysC SF2773 adenylylsulfate kinasechromosome CDS2845524 606 - 0.516502
cysI SF2779 sulfite reductase, alpha subunitchromosome CDS2852410 1713 - 0.556918
cysJ SF2780 sulfite reductase (NADPH), flavoprotein beta subunitchromosome CDS2854122 1800 - 0.561111
cysN SF2774 sulfate adenylyltransferase subunit 1chromosome CDS2846129 1428 - 0.540616
cysP SF2479 thiosulfate binding proteinchromosome CDS2539816 1017 - 0.530973
cysQ SF4272 ammonium transport system structural proteinchromosome CDS4450486 741 - 0.554656
cysW SF2477 chromosome pseudo2538108 450 - 0.573333
cysW SF2477 chromosome pseudo2538108 450 - 0.573333
dgoT SF3772 D-galactonate transport proteinchromosome CDS3880981 1338 + 0.529895
dppB SF3578 dipeptide transport system permease protein 1chromosome CDS3675834 1020 - 0.561765
dppC SF3577 dipeptide transport system permease protein 2chromosome CDS3674922 903 - 0.589147
dppD SF3576 putative ATP-binding component of dipeptide transport systemchromosome CDS3673928 984 - 0.558943
dps SF0763 DNA protection during starvation conditionschromosome CDS792470 504 - 0.492063
emrB SF2713 multidrug resistant protein emrBchromosome CDS2786514 1539 + 0.560754
emrD SF3789 multidrug resistance protein Dchromosome CDS3897624 1053 - 0.578348
emrY SF2434 multidrug resistance protein Ychromosome CDS2483701 1539 - 0.418454
exuT SF3133 transport protein of hexuronateschromosome CDS3235660 1299 + 0.543495
feoA SF3427 ferrous iron transport protein Achromosome CDS3509431 228 + 0.491228
feoB SF3428 ferrous iron transport protein Bchromosome CDS3509675 2322 + 0.546942
fepA SF0496 ferrienterobactin receptor precursorchromosome CDS512979 2241 - 0.541722
fepB SF0506 ferric enterobactin (enterochelin) binding proteinchromosome CDS527000 957 - 0.560084
fepC SF0502 ATP-binding component of ferric enterobactin transportchromosome CDS522848 816 - 0.53799
fepD SF0504 ferric enterobactin (enterochelin) transport proteinchromosome CDS524649 1017 - 0.605703
fepG SF0503 ferric enterobactin transport proteinchromosome CDS523660 993 - 0.584089
fes SF0497 enterochelin esterasechromosome CDS515462 1203 + 0.54281
fhuA SF0142 outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80chromosome CDS159262 2244 + 0.512923
fhuB SF0145 ferrichrome-iron transport protein FhuBchromosome CDS163240 1983 + 0.594554
fhuC SF0143 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS161556 798 + 0.561404
fhuD SF0144 ferrichrome-iron transport protein FhuDchromosome CDS162353 891 + 0.542088
fieF SF3993 ferrous iron efflux protein Fchromosome CDS4121452 903 + 0.522702
flhE SF1922 flagellar proteinchromosome CDS1957422 339 - 0.557522
focA SF0899 probable formate transporter (formate channel 1)chromosome CDS936027 858 - 0.486014
fsr SF0424 fosmidomycin resistance proteinchromosome CDS439897 1221 - 0.523342
ftn SF1951 cytoplasmic ferritinchromosome CDS1985001 498 + 0.429719
fur SF0610 ferric uptake regulatorchromosome CDS641200 447 + 0.485459
galP SF2934 galactose:proton symporter, MFS familychromosome CDS3026626 1356 + 0.533186
glpE SF3447 thiosulfate sulfurtransferasechromosome CDS3532709 327 - 0.544343
gppA SF3852 guanosine pentaphosphatase, exopolyphosphatasechromosome CDS3971312 1485 - 0.535354
hcaA1 SF2585 large terminal subunit of phenylpropionate dioxygenasechromosome CDS2653885 1362 + 0.530837
hcaC SF2587 ferredoxin subunit of phenylpropionate dioxygenasechromosome CDS2655761 321 + 0.554517
hcaT SF2583 MFS (major facilitator superfamily) transporterchromosome CDS2651560 1140 - 0.564035
hpaX SF4378 putative 4-hydroxyphenylacetate permeasechromosome CDS4550051 1356 - 0.464602
hycC SF2740 NADH dehydrogenase subunit Nchromosome CDS2815733 1818 - 0.585259
hyfD SF2527 hydrogenase 4 membrane subunitchromosome CDS2592868 1440 + 0.555556
hyfF SF2529 NADH dehydrogenase subunit Nchromosome CDS2594974 1587 + 0.541903
imm SF3714 putative membrane transport proteinchromosome CDS3819521 1194 - 0.569514
iutA SF3719 putative ferric siderophore receptorchromosome CDS3826604 2196 + 0.526412
katE SF1496 catalase; hydroperoxidase HPII(III)chromosome CDS1529897 2262 - 0.515473
katG SF4020 catalase; hydroperoxidase HPI(I)chromosome CDS4148913 2181 + 0.558001
kch SF1251 putative potassium channel proteinchromosome CDS1304071 1254 - 0.42185
kdpA SF0598 potassium-transporting ATPase subunit Achromosome CDS624709 1674 + 0.545998
kefB SF3369 glutathione-regulated potassium-efflux system proteinchromosome CDS3448080 1662 - 0.545126
kefC SF0044 glutathione-regulated potassium-efflux system proteinchromosome CDS47088 1863 + 0.552872
kgtP SF2649 alpha-ketoglutarate permeasechromosome CDS2721489 1299 - 0.487298
kup SF3828 low-affinity potassium transport proteinchromosome CDS3940021 1869 + 0.514714
mdoB SF4390 phosphoglycerol transferase Ichromosome CDS4563447 2253 - 0.521083
mdoG SF1044 periplasmic glucans biosynthesis proteinchromosome CDS1086640 1536 + 0.495443
mgtA SF4248 Mg2+ transport ATPase, P-type 1chromosome CDS4416797 2697 - 0.524657
mntH SF2457 putative manganese transport protein MntHchromosome CDS2514307 1239 - 0.530266
modA SF0541 molybdate-binding periplasmic protein; permeasechromosome CDS562301 774 - 0.510336
modB SF0540 molybdate transport permease proteinchromosome CDS561612 690 - 0.53913
modC SF0539 ATP-binding component of molybdate transportchromosome CDS560551 1059 - 0.537299
modF SF0544 ATP-binding component of molybdate transport systemchromosome CDS564375 1473 + 0.520027
nanT SF3260 putative sialic acid transporterchromosome CDS3357180 1521 - 0.552268
napD SF2291 hypothetical proteinchromosome CDS2324751 264 - 0.545455
narK SF1226 nitrate transport protein narkchromosome CDS1273769 1392 + 0.531609
narU SF1760 nitrite extrusion protein 2chromosome CDS1796339 1389 + 0.491001
nhaA SF0016 Na+/H+ antiporterchromosome CDS16140 1167 + 0.512425
nhaB SF1175 Na+/H+ antiporterchromosome CDS1216867 1542 - 0.525292
nikB SF3495 transport of nickel, membrane proteinchromosome CDS3585765 945 + 0.579894
nikC SF3496 transport of nickel, membrane proteinchromosome CDS3586706 834 + 0.603118
nikD SF3497 ATP-binding protein of nickel transport systemchromosome CDS3587539 765 + 0.59085
nikE SF3498 ATP-binding protein of nickel transport systemchromosome CDS3588300 807 + 0.557621
nirC SF3386 nitrite reductase, NirC proteinchromosome CDS3466474 555 + 0.547748
nirD SF3385 nitrite reductase small subunitchromosome CDS3465770 327 + 0.538226
nrfA SF4130 periplasmic cytochrome c(552)chromosome CDS4298354 1437 + 0.5254
nrfD SF4133 formate-dependent nitrate reductase, transmembrane proteinchromosome CDS4301066 957 + 0.583072
nuoL SF2354 NADH dehydrogenase subunit Lchromosome CDS2401318 1842 - 0.570033
nupG SF2961 permease protein for nucleosideschromosome CDS3047765 1305 + 0.495785
oppB SF1245 oligopeptide permease ABC transporter membrane componentchromosome CDS1297954 921 + 0.466884
oppC SF1246 oligopeptide transport permease proteinchromosome CDS1298889 909 + 0.529153
oppD SF1247 oligopeptide transporter ATP-binding componentchromosome CDS1299809 1014 + 0.514793
phnA SF4115 hypothetical proteinchromosome CDS4281825 336 + 0.46131
phnC SF4117 ATP-binding component of phosphonate transporterchromosome CDS4282894 789 + 0.583016
phnD SF4118 periplasmic binding protein component of phosphonate transporterchromosome CDS4283707 1017 + 0.548673
phoA SF0230 alkaline phosphatasechromosome CDS253195 1485 - 0.521886
phoU SF3731 negative regulator for pho regulon and putative enzyme in phosphate metabolismchromosome CDS3840310 726 + 0.522039
pitA SF3524 low-affinity phosphate transport proteinchromosome CDS3613497 1500 + 0.54
pitB SF3034 low-affinity phosphate transport proteinchromosome CDS3130189 1500 - 0.518
ppk SF2545 polyphosphate kinasechromosome CDS2611228 2067 + 0.486696
ppx SF2546 exopolyphosphatasechromosome CDS2613299 1542 + 0.510376
proP SF4112 low-affinity transport protein; proline permease IIchromosome CDS4276553 1503 - 0.499002
pspE SF1313 phage shock proteinchromosome CDS1363804 348 + 0.505747
pstA SF3729 high-affinity phosphate-specific transport proteinchromosome CDS3838540 891 + 0.569024
pstB SF3730 ATP-binding component of high-affinity phosphate-specific transport systemchromosome CDS3839522 774 + 0.528424
pstC SF3728 high-affinity phosphate-specific transport protein, cytoplasmic membrane componentchromosome CDS3837641 900 + 0.551111
pstS SF3727 high-affinity phosphate-specific transport protein; periplasmic phosphate-binding proteinchromosome CDS3836454 1041 + 0.51585
sbp SF3995 periplasmic sulfate-binding proteinchromosome CDS4123817 990 + 0.511111
sitA SF1365 Iron transport proteinchromosome CDS1407895 891 - 0.484848
sitB SF1364 Iron transport protein, ATP-binding componentchromosome CDS1407068 828 - 0.514493
sitC SF1363 Iron transport proteinchromosome CDS1406214 858 - 0.518648
sitD SF1362 Iron transport protein, inner membrane componentchromosome CDS1405360 858 - 0.494172
sodA SF3985 superoxide dismutase, manganesechromosome CDS4114458 621 + 0.536232
sodB SF1684 superoxide dismutasechromosome CDS1715083 582 + 0.498282
sodC SF1673 superoxide dismutase precursor (Cu-Zn)chromosome CDS1702236 537 - 0.530726
spy SF1483 periplasmic proteinchromosome CDS1519826 486 + 0.50823
sugE SF4306 suppresser of groELchromosome CDS4481112 468 + 0.527778
tauA SF0253 taurine transport system periplasmic proteinchromosome CDS271906 897 - 0.565217
tauB SF0252 taurine ATP-binding component of a transport systemchromosome CDS271126 768 - 0.559896
tauC SF0251 taurine transport system permease proteinchromosome CDS270302 828 - 0.583333
tehA SF1781 tellurite resistance protein TehAchromosome CDS1818380 993 - 0.530715
thiP SF0062 thiamin ABC transporter membrane componentchromosome CDS70753 1611 - 0.585351
trkA SF3321 potassium transporter peripheral membrane componentchromosome CDS3419343 1377 + 0.498911
trkH SF3925 potassium uptake proteinchromosome CDS4046096 1452 + 0.526171
xylE SF4174 xylose-proton symportorchromosome CDS4347436 1476 + 0.485772
yaaU SF0042 putative transport proteinchromosome CDS45123 1395 + 0.522581
yabM SF0065 putative transport proteinchromosome CDS75463 1179 + 0.480916
yadF SF0123 putative carbonic anhdrasechromosome CDS140099 663 - 0.508296
yadQ SF0147 chloride channel proteinchromosome CDS166762 1422 + 0.538678
yadT SF0150 vitamin B12-transporter protein BtuFchromosome CDS169317 801 - 0.526841
yaeC SF0188 putative lipoproteinchromosome CDS211010 816 - 0.485294
yaeE SF0189 putative transport system permease proteinchromosome CDS211865 654 - 0.51682
yajK SF0360 thiamine biosynthesis protein ThiIchromosome CDS370921 1371 + 0.513494
ybaL SF0423 putative transport proteinchromosome CDS437983 1677 - 0.550984
ybaR SF0429 putative ATPasechromosome CDS445195 2505 - 0.578443
ybdA SF0505 hypothetical membrane proteinchromosome CDS525764 1233 + 0.570965
ybdE SF0481 putative inner membrane component for iron transportchromosome CDS496942 3144 + 0.554389
ybeX SF0624 putative transport proteinchromosome CDS659935 879 + 0.516496
ybgR SF0552 zinc transporter ZitBchromosome CDS573350 942 + 0.528662
ybhI SF0891 putative membrane pump proteinchromosome CDS924919 1371 + 0.503282
ybiR SF0768 hypothetical proteinchromosome CDS797708 1119 + 0.520107
ybjM SF0801 hypothetical proteinchromosome CDS835506 378 + 0.489418
ycaD SF0857 putative MFS family transporter proteinchromosome CDS897207 1149 + 0.517842
ycbE SF0930 putative ATP-binding component of a transport systemchromosome CDS978666 768 - 0.550781
ycbO SF0935 hypothetical proteinchromosome CDS982711 1002 - 0.52495
yccK SF0971 putative sulfite reductasechromosome CDS1018262 387 - 0.459948
ycdB SF1021 hypothetical proteinchromosome CDS1066742 1266 + 0.538705
ycdO SF1020 hypothetical proteinchromosome CDS1065609 1128 + 0.515071
yceL SF1071 hypothetical proteinchromosome CDS1111879 1209 - 0.55335
ychM SF1209 hypothetical proteinchromosome CDS1256005 1653 - 0.546884
ychN SF1222 hypothetical proteinchromosome CDS1269058 354 - 0.516949
ydcG SF1786 putative glycoproteinchromosome CDS1821434 1656 - 0.50785
yddB SF1729 hypothetical proteinchromosome CDS1763914 2361 + 0.45701
ydeF SF1560 putative transport proteinchromosome CDS1593211 1119 - 0.495085
ydeN SF1726 putative sulfatasechromosome CDS1759201 1491 + 0.441315
ydhC SF1688 putative transport proteinchromosome CDS1719638 1212 + 0.531353
ydjE SF1454 putative transport proteinchromosome CDS1488774 1359 + 0.452539
yeaN SF1433 putative amino acid/amine transport proteinchromosome CDS1470463 1062 - 0.533898
yebI SF1869 hypothetical proteinchromosome CDS1907311 762 + 0.51706
yebL SF1868 putative adhesinchromosome CDS1905525 1059 - 0.474976
yebM SF1867 putative ATP-binding component of a transport systemchromosome CDS1906536 756 + 0.488095
yecI SF1948 ferritin-like proteinchromosome CDS1983209 504 + 0.482143
yegB SF2142 putative transport proteinchromosome CDS2168246 1416 + 0.554379
yeiO SF2255 putative transportchromosome CDS2286290 1179 + 0.53011
yfbS SF2368 putative transport proteinchromosome CDS2417633 1833 - 0.524277
yfdC SF2425 putative transport proteinchromosome CDS2475712 822 + 0.487835
yffB SF2513 hypothetical proteinchromosome CDS2579305 357 + 0.470588
yfjD SF2672 putative transport proteinchromosome CDS2747917 684 + 0.513158
ygaP SF2696 hypothetical proteinchromosome CDS2771415 525 + 0.462857
ygcS SF2787 putative transport proteinchromosome CDS2860556 1410 - 0.529078
ygeD SF2845 putative resistance proteinschromosome CDS2933032 1191 - 0.557515
ygiE SF3080 zinc transporter ZupTchromosome CDS3175686 774 + 0.533592
ygjE SF3104 hypothetical proteinchromosome CDS3197063 1464 + 0.555328
ygjT SF3128 putative transport proteinchromosome CDS3228818 963 + 0.539979
ygjV SF3130 hypothetical proteinchromosome CDS3231627 552 - 0.5
yhaU SF3164 putative transport proteinchromosome CDS3265067 1335 - 0.506367
yheA SF3356 hypothetical proteinchromosome CDS3439046 195 - 0.451282
yheL SF3361 hypothetical proteinchromosome CDS3443956 288 - 0.5
yheM SF3362 hypothetical proteinchromosome CDS3444251 360 - 0.494444
yheN SF3363 hypothetical proteinchromosome CDS3444610 387 - 0.55814
yhfC SF3383 hypothetical proteinchromosome CDS3461787 1182 + 0.51269
yhhS SF3491 hypothetical proteinchromosome CDS3581038 1260 - 0.55873
yhjA SF3593 putative cytochrome C peroxidasechromosome CDS3693920 1398 + 0.484979
yhjE SF3555 putative transport proteinchromosome CDS3644946 1323 + 0.560091
yhjX SF3581 putative resistance proteinchromosome CDS3681863 1209 - 0.514475
yibN SF3650 hypothetical proteinchromosome CDS3757180 432 - 0.5
yidG SF3787 hypothetical proteinchromosome CDS3896760 363 + 0.506887
yidY SF3752 putative transport proteinchromosome CDS3859193 1176 - 0.529762
yieL SF3738 putative xylanasechromosome CDS3848072 1176 + 0.503401
yieO SF3837 putative transport proteinchromosome CDS3948666 1404 - 0.49359
yihN SF3944 putative resistance proteinchromosome CDS4074823 1059 + 0.448536
yjaI SF4074 hypothetical proteinchromosome CDS4220245 567 - 0.516755
yjbB SF4086 putative alpha helix proteinchromosome CDS4245285 1632 + 0.558824
yjbK SF4159 putative regulatorchromosome CDS4329719 576 + 0.522569
yjcE SF4125 hypothetical proteinchromosome CDS4290570 1650 + 0.556364
yjiZ SF4387 putative transport proteinchromosome CDS4559658 1362 - 0.517621
yojI SF2295 putative ATP-binding component of a transport systemchromosome CDS2328358 1644 - 0.532847
yrbG SF3236 hypothetical proteinchromosome CDS3332456 966 + 0.518634
yzgL SF3449 hypothetical proteinchromosome CDS3534936 294 - 0.44898
zntA SF3487 zinc-transporting ATPasechromosome CDS3576973 2199 + 0.579354