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2024-05-18 11:05:56

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Escherichia coli UTI89, UTI89

Number of genes found: 138

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli UTI89, UTI89
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA UTI89_C2993 lambdoid prophage Qin antitermination protein Q-like proteinchromosome CDS2928398 783 - 0.473819
NA UTI89_C1500 putative capsid assembly protein of prophagechromosome CDS1414166 1506 + 0.605578
NA UTI89_C1020 putative protease La-like proteinchromosome CDS1013859 1761 - 0.516184
NA UTI89_C3474 putative disulfide isomerasechromosome CDS3409619 669 + 0.446936
NA UTI89_C3475 putative disulfide isomerasechromosome CDS3410302 672 + 0.485119
NA UTI89_C5120 putative protease/scaffold proteinchromosome CDS5011325 2124 + 0.515066
NA UTI89_C2373 hypothetical proteinchromosome CDS2320853 1005 + 0.550249
NA UTI89_C0948 prophage CP-933T putative stability/partitioning proteinchromosome CDS937348 960 - 0.544792
NA UTI89_C3322 putative SPFH domain containing serine proteasechromosome CDS3255282 909 + 0.493949
NA UTI89_C0242 hypothetical proteinchromosome CDS251029 2760 - 0.587681
NA UTI89_P016 putative thioredoxin-family proteinpUTI89 CDS13136 486 + 0.580247
NA UTI89_C0953 putative serine proteasechromosome CDS942252 825 - 0.513939
NA UTI89_C0946 ATP-dependent specificity component of ClpP serine protease, chaperonechromosome CDS936636 333 - 0.438438
NA UTI89_C1479 cryptic prophage CP-933M antitermination protein Q-like proteinchromosome CDS1402135 822 + 0.502433
NA UTI89_C0827 putative pyruvate formate-lyase 3 activating enzymechromosome CDS823827 927 - 0.523193
aat UTI89_C0900 leucyl, phenylalanyl-tRNA-protein transferasechromosome CDS897110 705 - 0.53617
ahpC UTI89_C0608 alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxideschromosome CDS622803 564 + 0.496454
ahpF UTI89_C0609 alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxideschromosome CDS623507 1596 + 0.524436
bcp UTI89_C2807 thiol peroxidasechromosome CDS2750075 471 + 0.492569
btuE UTI89_C1903 vitamin B12 transportchromosome CDS1829145 552 - 0.481884
cbpA UTI89_C1064 curved DNA-binding proteinchromosome CDS1051342 921 - 0.53203
ccmB UTI89_C2478 heme exporter protein Bchromosome CDS2433242 663 - 0.559578
ccmC UTI89_C2477 heme exporter protein Cchromosome CDS2432463 762 - 0.548556
ccmE UTI89_C2475 cytochrome c biogenesis, possible subunit of a heme lyasechromosome CDS2431781 480 - 0.539583
ccmF UTI89_C2474 cytochrome c-type biogenesis protein CcmFchromosome CDS2429841 1944 - 0.569444
ccmG UTI89_C2473 disulfide oxidoreductasechromosome CDS2429287 558 - 0.553763
ccmH UTI89_C2472 cytochrome c-type biogenesis protein CcmH precursorchromosome CDS2428238 1053 - 0.54321
clpA UTI89_C0888 ATP-dependent clp protease ATP-binding subunit clpAchromosome CDS884034 2292 + 0.529668
clpB UTI89_C2925 heat shock proteinchromosome CDS2875801 2586 - 0.513148
clpP UTI89_C0465 ATP-dependent proteolytic subunit of clpA-ClpP serine protease, heat shock protein F21.5chromosome CDS470795 624 + 0.501603
clpX UTI89_C0466 ATP-dependent specificity component of ClpP serine protease, chaperonechromosome CDS471544 1275 + 0.519216
degP UTI89_C0177 periplasmic serine protease DegPchromosome CDS186705 1425 + 0.537544
degQ UTI89_C3665 serine endoprotease DegQ precursorchromosome CDS3590368 1410 + 0.51773
degS UTI89_C3666 inner membrane serine protease DegS precursorchromosome CDS3591867 1068 + 0.523408
djlA UTI89_C0062 DnaJ-like protein DjlAchromosome CDS60469 909 + 0.518152
dnaJ UTI89_C0017 chaperone with DnaK; heat shock proteinchromosome CDS14219 1131 + 0.548187
dnaK UTI89_C0016 chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteinschromosome CDS12214 1917 + 0.511215
dsbA UTI89_C4447 disulfide oxidoreductasechromosome CDS4329575 627 + 0.480064
dsbB UTI89_C1371 disulfide bond formation protein Bchromosome CDS1305251 537 - 0.523277
dsbC UTI89_C3278 thiol:disulfide interchange protein DsbC precursorchromosome CDS3216778 711 - 0.481013
dsbD UTI89_C4733 thiol:disulfide interchange protein DsbD precursorchromosome CDS4635457 1698 - 0.536514
dsbG UTI89_C0607 thiol:disulfide interchange protein DsbG precursorchromosome CDS621685 807 - 0.460967
fdhE UTI89_C4478 formate dehydrogenase-N activity influencing protein fdhEchromosome CDS4361145 930 - 0.547312
fklB UTI89_C4816 FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (a rotamase)chromosome CDS4710322 780 + 0.530769
fkpA UTI89_C3849 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS3734612 813 - 0.483395
fliS UTI89_C2126 flagellar protein FliSchromosome CDS2029310 411 + 0.481752
glnD UTI89_C0181 [protein-PII] uridylyltransferasechromosome CDS191044 2673 - 0.536102
glnE UTI89_C3489 glutamate-ammonia-ligase adenylyltransferasechromosome CDS3424603 2952 - 0.554201
groEL UTI89_C4741 GroEL (chaperone Hsp60)chromosome CDS4643137 1647 + 0.530662
groES UTI89_C4740 GroES (10 Kd chaperone protein)chromosome CDS4642800 294 + 0.486395
grpE UTI89_C2947 GrpE proteinchromosome CDS2894203 594 - 0.501683
grxA UTI89_C0852 glutaredoxin 1chromosome CDS851691 273 - 0.457875
grxB UTI89_C1189 glutaredoxin 2chromosome CDS1168375 648 - 0.489198
grxC UTI89_C4152 glutaredoxin 3chromosome CDS4045907 252 - 0.496032
gst UTI89_C1826 glutathione S-transferasechromosome CDS1754538 606 + 0.5
hflC UTI89_C4775 HflC protein regulator of FtsH protease, subunit of HflK-HflC complexchromosome CDS4675112 1005 + 0.523383
hflK UTI89_C4774 HflK protein regulator of FtsH protease, subunit of HflK-HflC complexchromosome CDS4673850 1260 + 0.562698
hlyC UTI89_C4927 hemolysin Cchromosome CDS4828108 645 - 0.344186
hscA UTI89_C2848 chaperone protein HscAchromosome CDS2804147 1905 - 0.573228
hscB UTI89_C2849 hsc20 molecular co-chaperonechromosome CDS2806014 516 - 0.517442
hslJ UTI89_C1622 heat shock protein HslJchromosome CDS1537566 435 - 0.475862
hslO UTI89_C3899 heat shock protein 33chromosome CDS3782436 885 + 0.526554
hslU UTI89_C4516 ATP-dependent hslVU protease ATP-binding subunit hslUchromosome CDS4397414 1332 - 0.522523
hslV UTI89_C4517 ATP-dependent hslVU protease peptidase subunit hslVchromosome CDS4398755 531 - 0.525424
htpG UTI89_C0501 chaperone Hsp90, heat shock protein C 62.5chromosome CDS509251 1875 + 0.528
htpX UTI89_C2030 probable protease (heat shock protein HtpX)chromosome CDS1938385 882 - 0.531746
hyaE UTI89_C1044 hydrogenase-1 operon protein HyaEchromosome CDS1033676 399 + 0.548872
hybG UTI89_C3412 hydrogenase-2 operon protein HybGchromosome CDS3350539 249 - 0.522088
hypB UTI89_C3090 hydrogenase isoenzymes nickel incorporation protein hypBchromosome CDS3010094 873 + 0.558992
hypC UTI89_C3091 hydrogenase isoenzymes formation protein HypCchromosome CDS3010957 273 + 0.542125
hypE UTI89_C3093 hydrogenase isoenzymes formation protein HypEchromosome CDS3012347 1011 + 0.576657
hypF UTI89_C3074 hydrogenase maturation protein HypFchromosome CDS2993663 2325 - 0.579355
ibpA UTI89_C4238 16 kDa heat shock protein Achromosome CDS4128576 420 - 0.466667
ibpB UTI89_C4237 16 kDa heat shock protein Bchromosome CDS4128036 435 - 0.485057
lon UTI89_C0467 DNA-binding, ATP-dependent protease La; heat shock K-proteinchromosome CDS472961 2400 + 0.52375
mrsC UTI89_C3610 ATP-binding proteinchromosome CDS3544831 1935 - 0.532817
msrA UTI89_C4827 methionine sulfoxide reductase A / protein-methionine-S-oxide reductase / methionine sulfoxide reductasechromosome CDS4721863 705 - 0.543262
msrB UTI89_C1974 methionine sulfoxide reductase B; protein-methionine-S-oxide reductasechromosome CDS1894264 444 - 0.47973
nrdG UTI89_C4841 NrdG subunit of ribonucleoside triphosphate reductase activasechromosome CDS4739746 465 - 0.513978
nrdH UTI89_C3033 glutaredoxin-like protein; hydrogen donorchromosome CDS2957452 246 + 0.544715
nrfE UTI89_C4664 formate-dependent nitrite reductase subunit nrfE; possible assembly functionchromosome CDS4560882 1683 + 0.568033
nrfF UTI89_C4665 formate-dependent nitrite reductase complex NrfF subunit precursorchromosome CDS4562557 384 + 0.513021
osmC UTI89_C1701 osmotically inducible protein OsmCchromosome CDS1623536 432 + 0.5
pcm UTI89_C3114 protein-L-isoaspartate O-methyltransferasechromosome CDS3031077 627 - 0.53429
pflA UTI89_C0973 pyruvate formate lyase activating enzyme 1chromosome CDS954846 768 - 0.501302
pflC UTI89_C4543 pyruvate formate-lyase 2 activating enzymechromosome CDS4430575 879 + 0.547213
ppiA UTI89_C3866 peptidyl-prolyl cis-trans isomerase A (rotamase A)chromosome CDS3749730 573 - 0.511344
ppiB UTI89_C0554 peptidyl-prolyl cis-trans isomerase B (rotamase B)chromosome CDS564961 495 - 0.480808
ppiC UTI89_C4331 peptidyl-prolyl cis-trans isomerase C (rotamase C)chromosome CDS4220303 282 - 0.510638
ptrA UTI89_C3222 protease III precursorchromosome CDS3146432 2889 - 0.50848
radA UTI89_C5160 DNA repair protein RadAchromosome CDS5049558 1431 + 0.575122
rpsV UTI89_C1698 30S ribosomal subunit protein S22chromosome CDS1622737 138 - 0.449275
scsC UTI89_P007 secreted copper-sensitivity suppressor CpUTI89 CDS4056 210 + 0.557143
scsD UTI89_P008 secreted copper-sensitivity suppressor DpUTI89 CDS4255 507 + 0.593688
sira UTI89_C3986 possible RNA-binding protein required for wild-type FtsZ ring formation on rich mediachromosome CDS3875240 246 - 0.51626
slpA UTI89_C0030 probable FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase)chromosome CDS27336 450 + 0.546667
slyD UTI89_C3851 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS3735912 591 - 0.551607
smpB UTI89_C2954 SsrA-binding proteinchromosome CDS2898984 483 + 0.515528
sohB UTI89_C1540 possible protease SohBchromosome CDS1450279 1050 + 0.504762
sppA UTI89_C1962 protease IV, a signal peptide peptidasechromosome CDS1881084 1857 + 0.518578
sspA UTI89_C3658 stringent starvation protein Achromosome CDS3586448 639 - 0.536776
stbA UTI89_P062 stable plasmid inheritance proteinpUTI89 CDS53186 972 + 0.425926
sufB UTI89_C1875 component of SufB-SufC-SufD cysteine desulfurase (SufS) activator complexchromosome CDS1798281 1527 - 0.516699
surA UTI89_C0060 peptidyl-prolyl cis-trans isomerasechromosome CDS56614 1287 - 0.539239
tpx UTI89_C1595 thiol peroxidasechromosome CDS1507560 507 - 0.514793
trbB UTI89_P129 F pilus assembly periplasmic protein TrbBpUTI89 CDS95483 546 + 0.558608
trxA UTI89_C4335 thioredoxin 1chromosome CDS4225650 435 + 0.485057
trxB UTI89_C0903 thioredoxin reductasechromosome CDS901467 1086 - 0.516575
trxC UTI89_C2905 putative thioredoxin-like proteinchromosome CDS2860301 420 + 0.497619
ybaU UTI89_C0469 peptidyl-prolyl cis-trans isomerase Dchromosome CDS476033 1872 + 0.521368
ybbJ UTI89_C0523 hypothetical protein YbbJchromosome CDS532385 459 - 0.575163
ybbK UTI89_C0524 putative protease YbbKchromosome CDS532840 918 - 0.526144
ybbN UTI89_C0527 putative thioredoxin-like proteinchromosome CDS535409 891 - 0.553311
ycaL UTI89_C0980 putative metalloprotease YcaLchromosome CDS964762 774 + 0.488372
ydcP UTI89_C1654 putative protease YdcP precursorchromosome CDS1578262 2004 + 0.505988
ydhD UTI89_C1845 hypothetical proteinchromosome CDS1769527 348 - 0.522988
yeaZ UTI89_C2001 O-sialoglycoprotein endopeptidasechromosome CDS1917261 696 - 0.556035
yedF UTI89_C2131 hypothetical proteinchromosome CDS2033486 234 + 0.482906
yegD UTI89_C2345 hypothetical chaperone protein YegDchromosome CDS2285733 1416 + 0.555791
yegQ UTI89_C2360 hypothetical proteinchromosome CDS2308218 1362 + 0.544053
yfcF UTI89_C2585 hypothetical proteinchromosome CDS2551982 645 - 0.52093
yfcG UTI89_C2586 putative S-transferasechromosome CDS2552762 648 + 0.510802
yfgJ UTI89_C2831 hypothetical protein YfgJchromosome CDS2783118 216 - 0.453704
ygcF UTI89_C3140 hypothetical protein YgcFchromosome CDS3056612 672 - 0.520833
yggG UTI89_C3324 putative metalloprotease YggGchromosome CDS3258460 978 + 0.517382
yggX UTI89_C3353 hypothetical proteinchromosome CDS3281649 276 + 0.471014
yghU UTI89_C3411 hypothetical GST-like protein YghUchromosome CDS3349492 915 + 0.53224
ygjD UTI89_C3500 probable O-sialoglycoprotein endopeptidasechromosome CDS3437340 1014 - 0.564103
yhbU UTI89_C3585 putative protease YhbU precursorchromosome CDS3521293 1023 + 0.564027
yhbV UTI89_C3586 hypothetical protein YhbVchromosome CDS3522306 897 + 0.562988
yhfA UTI89_C3859 hypothetical proteinchromosome CDS3743419 405 - 0.516049
yhgI UTI89_C3915 hypothetical proteinchromosome CDS3798492 576 + 0.527778
yibF UTI89_C4134 putative S-transferasechromosome CDS4025266 609 - 0.525452
yifB UTI89_C4322 putative 2-component regulatorchromosome CDS4209317 1551 - 0.506125
yjjW UTI89_C5149 hypothetical protein YjjWchromosome CDS5038423 864 - 0.560185
yliJ UTI89_C0841 hypothetical GST-like protein YliJchromosome CDS841068 633 - 0.518167
yqeB UTI89_C3260 hypothetical protein YqeBchromosome CDS3191280 1626 - 0.5246
yqjG UTI89_C3540 putative transferasechromosome CDS3477555 987 + 0.516717