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2024-05-18 11:05:31

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Shigella flexneri 2a str. 301, 301

Number of genes found: 141

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SF3510 hypothetical proteinchromosome CDS3602935 513 - 0.467836
NA SF1904 putative serine proteasechromosome CDS1941077 828 + 0.518116
NA SF3274 putative periplasmic serine protease Do, heat shock protein HtrAchromosome CDS3368574 1200 + 0.5125
NA SF1600 hypothetical proteinchromosome CDS1628557 492 - 0.546748
NA SF3007 hypothetical proteinchromosome CDS3103149 468 - 0.399573
NA SF2924 putative serine proteasechromosome CDS3015838 909 + 0.488449
NA SF0955 putative ATP-dependent proteasechromosome CDS1003607 1761 - 0.51732
NA SF3036 hypothetical proteinchromosome CDS3133996 915 + 0.535519
NA SF4279 similar to FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS4458423 672 - 0.549107
NA SF1667 hypothetical proteinchromosome CDS1696595 1110 - 0.547748
NA SF1544 antitermination protein, homolog of cryptic prophagechromosome CDS1578402 822 - 0.489051
NA SF0703 head-tail preconnector gp5chromosome CDS729846 1506 + 0.588977
aat SF0844 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS878100 705 - 0.539007
ahpC SF0524 alkyl hydroperoxide reductase, C22 subunitchromosome CDS544792 564 + 0.498227
ahpF SF0525 alkyl hydroperoxide reductase, F52a subunitchromosome CDS545570 1596 + 0.524436
bcp SF2523 bacterioferritin comigratory proteinchromosome CDS2588536 471 + 0.492569
btuE SF1521 Vitamin B12 transport periplasmic protein BtuEchromosome CDS1552898 552 + 0.492754
cbpA SF1004 curved DNA-binding proteinchromosome CDS1051156 921 - 0.527687
ccmA SF2285 ATP-binding protein of heme exporter Achromosome CDS2319022 624 - 0.55609
ccmB SF2284 heme exporter protein B, cytochrome c-type biogenesis proteinchromosome CDS2318363 663 - 0.556561
ccmC SF2283 heme exporter protein Cchromosome CDS2317584 738 - 0.555556
ccmE SF2281 cytochrome-c biosynthesis heme-carrier protein ccmEchromosome CDS2316902 480 - 0.54375
ccmF SF2280 cytochrome c-type biogenesis proteinchromosome CDS2314962 1944 - 0.569959
ccmH SF2278 possible subunit of heme lyasechromosome CDS2313359 1053 - 0.545109
clpA SF0842 ATP-binding component of serine proteasechromosome CDS874577 2277 + 0.526131
clpB SF2655 heat shock proteinchromosome CDS2731536 2574 + 0.513597
clpP SF0382 ATP-dependent Clp protease proteolytic subunitchromosome CDS391777 624 + 0.509615
clpX SF0383 ATP-dependent protease ATP-binding subunitchromosome CDS392526 1275 + 0.517647
cydC SF0845 ATP-binding component of cytochrome-related transportchromosome CDS878846 1722 - 0.534262
cydD SF0846 ATP-binding component of cytochrome-related transportchromosome CDS880568 1767 - 0.532541
cyoE SF0369 protoheme IX farnesyltransferasechromosome CDS380467 888 - 0.533784
cysU SF2478 sulfate, thiosulfate transport system permease T proteinchromosome CDS2538983 834 - 0.549161
degS SF3275 proteasechromosome CDS3370053 1068 + 0.525281
djlA SF0052 Dna-J like membrane chaperone proteinchromosome CDS56682 816 + 0.529412
dnaJ SF0015 chaperone with DnaK; heat shock proteinchromosome CDS14167 1131 + 0.55084
dnaK SF0014 molecular chaperone DnaKchromosome CDS12162 1917 + 0.511737
dsbA SF3931 protein disulfide isomerase Ichromosome CDS4056106 627 + 0.480064
dsbB SF1174 disulfide bond formation protein Bchromosome CDS1216191 531 - 0.52354
dsbC SF2879 protein disulfide isomerase IIchromosome CDS2972027 711 - 0.483826
dsbD SF4290 thiol:disulfide interchange protein precursorchromosome CDS4466965 1698 - 0.540047
dsbE SF2279 disulfide oxidoreductasechromosome CDS2314408 558 - 0.543011
dsbG SF0523 thiol:disulfide interchange proteinchromosome CDS543674 807 - 0.459727
fdhE SF3967 formate dehydrogenase accessory protein FdhEchromosome CDS4095709 930 - 0.553763
fkpA SF3365 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS3445885 813 - 0.477245
flgA SF1078 flagellar basal body P-ring biosynthesis proteinchromosome CDS1117965 660 - 0.521212
flgJ SF1085 flagellar biosynthesis proteinchromosome CDS1125093 942 + 0.539278
flgN SF1076 flagella synthesis protein FlgNchromosome CDS1117175 417 - 0.479616
fliS SF1968 flagellar protein FliSchromosome CDS2001449 411 + 0.481752
ftsH SF3218 Zn metallo-peptidase, integral membrane cell division proteinchromosome CDS3317184 1935 - 0.534884
glnD SF0157 PII uridylyl-transferasechromosome CDS176922 2673 - 0.534231
glnE SF3094 adenylylating enzyme for glutamine synthetasechromosome CDS3185926 2841 - 0.552974
groEL SF4297 chaperonin GroELchromosome CDS4474645 1647 + 0.530662
groES SF4296 co-chaperonin GroESchromosome CDS4474308 294 + 0.493197
grpE SF2673 heat shock protein GrpEchromosome CDS2748655 594 - 0.501683
grxA SF0802 glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductasechromosome CDS835913 258 - 0.449612
grxB SF1070 glutaredoxin 2chromosome CDS1111168 648 - 0.487654
grxC SF3649 glutaredoxin 3chromosome CDS3756787 252 - 0.511905
gst SF1660 glutathionine S-transferasechromosome CDS1691095 606 + 0.5033
hflC SF4330 protease specific for phage lambda cII repressorchromosome CDS4508119 1005 + 0.526368
hflK SF4329 protease specific for phage lambda cII repressorchromosome CDS4506857 1260 + 0.561905
hscA SF2573 chaperone protein HscAchromosome CDS2642120 1851 - 0.575905
hscB SF2574 co-chaperone HscBchromosome CDS2643987 516 - 0.51938
hslO SF3419 Hsp33-like chaperoninchromosome CDS3498989 870 + 0.524138
hslU SF4009 ATP-dependent protease ATP-binding subunitchromosome CDS4135494 1332 - 0.523273
hslV SF4010 ATP-dependent protease peptidase subunitchromosome CDS4136835 531 - 0.525424
htpG SF0418 heat shock protein 90chromosome CDS431645 1875 + 0.5264
htpX SF1396 heat shock protein HtpXchromosome CDS1436948 879 + 0.533561
htrA SF0153 periplasmic serine protease Do, heat shock protein HtrAchromosome CDS172543 1425 + 0.539649
hyaE SF0977 Hydrogenase-1 operon protein hyaEchromosome CDS1024276 399 + 0.568922
hybG SF3037 hydrogenase-2 componentchromosome CDS3135033 249 - 0.534137
hypB SF2744 guanine-nucleotide binding proteinchromosome CDS2819350 873 + 0.553265
hypC SF2745 hydrogenase isoenzyme HypCchromosome CDS2820213 273 + 0.553114
hypD SF2746 hydrogenase isoenzyme HypDchromosome CDS2820485 1122 + 0.553476
hypE SF2747 hypE productchromosome CDS2821645 969 + 0.575851
hypF SF2735 transcriptional regulatory proteinchromosome CDS2808846 2253 - 0.575677
ibpA SF3776 heat shock proteinchromosome CDS3885357 414 + 0.47343
ibpB SF3777 heat shock proteinchromosome CDS3885882 429 + 0.48951
lon SF0384 DNA-binding, ATP-dependent protease La; heat shock K-proteinchromosome CDS393988 2355 + 0.523567
msrA SF4268 methionine sulfoxide reductase Achromosome CDS4445822 639 + 0.541471
mxiG CP0136 MxiG, component of the Mxi-Spa secretion machinery, contains one transmembrane segmentpCP301 CDS118817 1116 + 0.310932
nrdG SF4253 anaerobic ribonucleotide reductase activating proteinchromosome CDS4426754 465 + 0.505376
nrdH SF2701 glutaredoxin-like proteinchromosome CDS2774617 246 + 0.528455
nrfE SF4134 formate-dependent nitrite reductasechromosome CDS4302102 1659 + 0.571429
nrfF SF4135 component of formate-dependent nitrite reductase complexchromosome CDS4303753 384 + 0.515625
nrfG SF4136 component of formate-dependent nitrite reductase complexchromosome CDS4304133 597 + 0.522613
osmC SF1743 osmotically inducible proteinchromosome CDS1780325 432 - 0.502315
pcm SF2766 protein-L-isoaspartate O-methyltransferasechromosome CDS2841030 627 - 0.535885
pflA SF0897 pyruvate formate lyase activating enzyme 1chromosome CDS932758 741 - 0.495277
pflC SF4029 probable pyruvate formate lyase activating enzyme 2chromosome CDS4161325 879 + 0.54835
ppiA SF3382 peptidyl-prolyl cis-trans isomerase A (rotamase A)chromosome CDS3460935 582 - 0.510309
ppiB SF0456 peptidyl-prolyl cis-trans isomerase B (rotamase B)chromosome CDS472466 495 - 0.476768
ppiC SF3850 peptidyl-prolyl cis-trans isomerase C (rotamase C)chromosome CDS3968876 282 - 0.510638
ptr SF2832 protease IIIchromosome CDS2916321 2889 - 0.511596
slpA SF0025 probable FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase)chromosome CDS25256 450 + 0.548889
slpA SF0024 probable FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase)chromosome CDS24749 450 - 0.548889
slyD SF3367 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS3447185 591 - 0.548223
smpB SF2679 SsrA-binding proteinchromosome CDS2753436 483 + 0.515528
sms SF4421 probable ATP-dependent proteasechromosome CDS4591518 1383 + 0.576283
sohB SF1274 putative proteasechromosome CDS1323616 1050 + 0.505714
sppA SF1457 protease IV, a signal peptide peptidasechromosome CDS1492060 1857 - 0.519655
sspA SF3269 stringent starvation protein Achromosome CDS3364655 639 - 0.536776
stbA CP0195 plasmid stable inheritance proteinpCP301 CDS161854 960 - 0.398958
surA SF0050 survival proteinchromosome CDS52734 1287 - 0.538462
tig SF0381 trigger factorchromosome CDS390232 1299 + 0.511932
tpx SF1330 thiol peroxidasechromosome CDS1383186 507 - 0.514793
trxA SF3854 thioredoxinchromosome CDS3974272 384 + 0.5
trxB SF0847 thioredoxin reductasechromosome CDS882457 966 - 0.534162
trxC SF2644 putative thioredoxin-like proteinchromosome CDS2715776 420 + 0.495238
ybaU SF0386 putative protease maturation proteinchromosome CDS397015 1872 + 0.521902
ybbJ SF0433 hypothetical proteinchromosome CDS450721 456 - 0.576754
ybbK SF0434 putative proteasechromosome CDS451176 918 - 0.523965
ybbN SF0437 putative thioredoxin-like proteinchromosome CDS453745 891 - 0.555556
ybeS SF0635 putative enzymechromosome CDS671678 1428 - 0.485294
ybfN SF0611 hypothetical proteinchromosome CDS641730 327 - 0.489297
ybiY SF0774 putative pyruvate formate-lyase 2 activating enzymechromosome CDS806672 927 - 0.542611
ycaL SF0905 putative heat shock proteinchromosome CDS944055 765 + 0.495425
ydhD SF1682 hypothetical proteinchromosome CDS1713446 348 - 0.525862
yeaA SF1445 methionine sulfoxide reductase Bchromosome CDS1480321 414 + 0.478261
yeaZ SF1421 hypothetical proteinchromosome CDS1459020 696 + 0.558908
yedF SF1973 hypothetical proteinchromosome CDS2005625 234 + 0.482906
yeeD SF2071 hypothetical proteinchromosome CDS2089796 228 - 0.513158
yegQ SF2146 hypothetical proteinchromosome CDS2172450 1362 + 0.540382
yfcF SF2377 hypothetical proteinchromosome CDS2427954 645 - 0.51938
yfcG SF2378 putative S-transferasechromosome CDS2428734 648 + 0.509259
ygcF SF2790 hypothetical proteinchromosome CDS2863632 672 - 0.513393
yggG SF2926 hypothetical proteinchromosome CDS3018935 885 + 0.520904
yggX SF2959 hypothetical proteinchromosome CDS3046192 276 + 0.474638
ygjD SF3105 putative O-sialoglycoprotein endopeptidasechromosome CDS3198568 1014 - 0.57002
yhbU SF3199 putative collagenasechromosome CDS3293692 996 + 0.571285
yhbV SF3200 hypothetical proteinchromosome CDS3294696 879 + 0.558589
yhfA SF3375 hypothetical proteinchromosome CDS3454624 405 - 0.518519
yhgI SF3437 hypothetical proteinchromosome CDS3516919 576 + 0.53125
yhhP SF3488 hypothetical proteinchromosome CDS3579273 246 - 0.54065
yibF SF3630 putative S-transferasechromosome CDS3735644 609 - 0.528736
yiiF SF3966 hypothetical proteinchromosome CDS4095137 243 + 0.45679
yjjW SF4411 putative activating enzymechromosome CDS4581339 864 - 0.545139
yliJ SF0788 putative transferasechromosome CDS824010 633 - 0.519747
ynhC SF1711 hypothetical proteinchromosome CDS1743435 1272 - 0.529874
ynhD SF1712 putative ATP-binding component of a transport systemchromosome CDS1744681 747 - 0.502008
ynhE SF1713 hypothetical proteinchromosome CDS1745437 1488 - 0.517473
yqjG SF3145 putative transferasechromosome CDS3242892 987 + 0.515704