Gene list
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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Yersinia pestis KIM, KIM
Number of genes found: 139
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia pestis KIM, KIM | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | y1953 | hypothetical protein | chromosome | CDS | 2155983 | 366 | + | 0.459016 |
NA | y0229 | hypothetical protein | chromosome | CDS | 242133 | 855 | + | 0.495906 |
NA | y0944 | adhesin system protein | chromosome | CDS | 1063849 | 1854 | + | 0.452535 |
NA | y1574 | cytochrome c-type biogenesis protein | chromosome | CDS | 1740444 | 513 | + | 0.465887 |
NA | y0319 | peroxiredoxin family protein | chromosome | CDS | 346619 | 732 | - | 0.463115 |
NA | y2871 | transferase | chromosome | CDS | 3168739 | 723 | + | 0.481328 |
NA | y3909 | hypothetical protein | chromosome | CDS | 4364349 | 279 | + | 0.437276 |
NA | y1394 | heat shock protein | chromosome | CDS | 1549071 | 1353 | - | 0.543976 |
NA | y3534 | O-sialoglycoprotein endopeptidase | chromosome | CDS | 3917772 | 1029 | - | 0.516035 |
NA | y0705 | hypothetical protein | chromosome | CDS | 792071 | 900 | - | 0.506667 |
NA | y3903 | hypothetical protein | chromosome | CDS | 4361988 | 576 | - | 0.46875 |
NA | y3340 | hypothetical protein | chromosome | CDS | 3679946 | 273 | + | 0.410256 |
NA | y0227 | hypothetical protein | chromosome | CDS | 239254 | 1176 | + | 0.460884 |
NA | y0112 | transferase | chromosome | CDS | 122056 | 936 | + | 0.49359 |
NA | y3613 | hypothetical protein | chromosome | CDS | 4005512 | 180 | + | 0.527778 |
NA | y1935 | hypothetical protein | chromosome | CDS | 2132888 | 1512 | + | 0.494048 |
NA | y3669 | ATP-dependent protease | chromosome | CDS | 4076150 | 2604 | - | 0.534562 |
NA | y1937 | hypothetical protein | chromosome | CDS | 2135306 | 1326 | + | 0.497738 |
NA | Y1114 | putative serine protease | pMT-1 | CDS | 98281 | 831 | + | 0.515042 |
NA | Y1056 | hypothetical protein | pMT-1 | CDS | 48264 | 354 | - | 0.533898 |
NA | y3791 | hypothetical protein | chromosome | CDS | 4211044 | 723 | - | 0.304288 |
NA | y3195 | type IV prepilin peptidase | chromosome | CDS | 3515572 | 915 | - | 0.357377 |
NA | y1031 | protease maturation protein | chromosome | CDS | 1161987 | 1887 | + | 0.45469 |
NA | y0334 | two-component regulator | chromosome | CDS | 368467 | 1545 | - | 0.532686 |
NA | y0409 | hypothetical protein | chromosome | CDS | 457677 | 396 | + | 0.467172 |
NA | y3189 | hypothetical protein | chromosome | CDS | 3511342 | 636 | + | 0.47956 |
NA | y1379 | hypothetical protein | chromosome | CDS | 1527407 | 1395 | - | 0.496057 |
NA | y0354 | glutamine cyclotransferase | chromosome | CDS | 395253 | 792 | - | 0.340909 |
NA | y2363 | thioredoxin-family protein | chromosome | CDS | 2606790 | 531 | - | 0.468927 |
NA | y1963 | hypothetical protein | chromosome | CDS | 2163408 | 1155 | + | 0.51342 |
NA | y1280 | pyrrolidone-carboxylate peptidase | chromosome | CDS | 1425707 | 648 | + | 0.498457 |
NA | y0988 | peroxidase | chromosome | CDS | 1119184 | 603 | - | 0.472637 |
NA | y0535 | hypothetical protein | chromosome | CDS | 601882 | 270 | + | 0.548148 |
NA | y1158 | ABC transporter, ATP-binding protein | chromosome | CDS | 1307011 | 1791 | + | 0.467337 |
NA | y1936 | ATP-binding component of a transport system | chromosome | CDS | 2134558 | 774 | + | 0.459948 |
NA | y3482 | hypothetical protein | chromosome | CDS | 3865823 | 423 | + | 0.385343 |
NA | y2238 | hypothetical protein | chromosome | CDS | 2466377 | 753 | - | 0.544489 |
NA | y1575 | cytochrome c-type biogenesis protein | chromosome | CDS | 1740956 | 1227 | + | 0.495518 |
NA | y1096 | protease | chromosome | CDS | 1235462 | 915 | - | 0.469945 |
NA | y3311 | hypothetical protein | chromosome | CDS | 3646857 | 780 | + | 0.489744 |
NA | y2164 | methionine sulfoxide reductase B | chromosome | CDS | 2391287 | 471 | - | 0.443737 |
NA | y1538 | Clp ATPase | chromosome | CDS | 1702814 | 2751 | + | 0.475463 |
NA | y1097 | thioredoxin-like protein | chromosome | CDS | 1236571 | 870 | - | 0.508046 |
NA | y0816 | hypothetical protein | chromosome | CDS | 915174 | 672 | + | 0.491071 |
NA | y2739 | ATP-dependent protease | chromosome | CDS | 3021964 | 1773 | + | 0.51269 |
NA | y1095 | hypothetical protein | chromosome | CDS | 1235010 | 450 | - | 0.502222 |
NA | y0706 | collagenase | chromosome | CDS | 792961 | 996 | - | 0.5251 |
NA | y3957 | hypothetical protein | chromosome | CDS | 4417198 | 408 | + | 0.490196 |
NA | y3548 | hypothetical protein | chromosome | CDS | 3929900 | 717 | + | 0.492329 |
NA | y3784 | peptidase | chromosome | CDS | 4204696 | 1047 | + | 0.526266 |
NA | y3447 | hypothetical protein | chromosome | CDS | 3834214 | 294 | - | 0.503401 |
aat | y2806 | leucyl/phenylalanyl-tRNA--protein transferase | chromosome | CDS | 3109812 | 735 | + | 0.491156 |
bcp | y1417 | bacterioferritin comigratory protein | chromosome | CDS | 1573250 | 474 | - | 0.443038 |
btuE | y1915 | vitamin B12-binding periplasmic protein of vitamin B12 ABC transporter | chromosome | CDS | 2108578 | 555 | + | 0.445045 |
ccmA | y1567 | ATP binding protein of heme exporter A | chromosome | CDS | 1735042 | 657 | + | 0.494673 |
ccmB | y1568 | heme exporter protein B | chromosome | CDS | 1735641 | 687 | + | 0.519651 |
ccmC | y1569 | heme exporter protein C | chromosome | CDS | 1736390 | 738 | + | 0.501355 |
ccmE | y1571 | heme lyase | chromosome | CDS | 1737423 | 495 | + | 0.511111 |
ccmF | y1572 | cytochrome c-type biogenesis protein | chromosome | CDS | 1737914 | 1971 | + | 0.524099 |
clpA | y2809 | ATP-binding component of serine protease | chromosome | CDS | 3112053 | 2283 | - | 0.494963 |
clpB | y0914 | heat shock protein | chromosome | CDS | 1021277 | 2595 | + | 0.478613 |
clpB | y2699 | heat shock protein | chromosome | CDS | 2981840 | 2640 | - | 0.592424 |
clpB | y0275 | heat shock protein | chromosome | CDS | 293817 | 2604 | - | 0.53149 |
clpB | y3362 | protease | chromosome | CDS | 3705087 | 2649 | - | 0.585126 |
clpP | y1027 | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 1156547 | 624 | + | 0.461538 |
clpX | y1028 | ATP-dependent protease ATP-binding subunit | chromosome | CDS | 1157376 | 1272 | + | 0.481132 |
cydC | y2805 | ATP-binding component of cytochrome-related transport | chromosome | CDS | 3107893 | 1725 | + | 0.515942 |
cydD | y2803 | ATP-binding component of cytochrome-related transport | chromosome | CDS | 3106106 | 1785 | + | 0.505882 |
cyoE | y1018 | protoheme IX farnesyltransferase | chromosome | CDS | 1145303 | 909 | - | 0.465347 |
cysU | y1467 | inner membrane permease T of sulfate/thiosulfate ABC transporter | chromosome | CDS | 1625825 | 834 | + | 0.53717 |
degQ | y0137 | serine endoprotease | chromosome | CDS | 148564 | 1392 | + | 0.484914 |
degS | y0139 | protease | chromosome | CDS | 150756 | 1089 | + | 0.481175 |
djlA | y3679 | Dna-J like membrane chaperone protein | chromosome | CDS | 4089116 | 834 | - | 0.5 |
dnaJ | y3705 | chaperone with DnaK; heat shock protein | chromosome | CDS | 4118103 | 1140 | - | 0.499123 |
dnaK | y3706 | molecular chaperone DnaK | chromosome | CDS | 4119354 | 1911 | - | 0.480377 |
dsbA | y3812 | protein disulfide isomerase I | chromosome | CDS | 4236383 | 624 | - | 0.421474 |
dsbB | y2179 | disulfide bond formation protein B | chromosome | CDS | 2409820 | 579 | + | 0.455959 |
dsbC | y3275 | protein disulfide isomerase II | chromosome | CDS | 3606320 | 717 | - | 0.456067 |
dsbD | y0603 | thiol:disulfide interchange protein precursor | chromosome | CDS | 680946 | 1788 | - | 0.522371 |
dsbE | y1573 | disulfide oxidoreductase | chromosome | CDS | 1739881 | 567 | + | 0.497355 |
fdhE | y4075 | formate dehydrogenase accessory protein FdhE | chromosome | CDS | 4519865 | 930 | - | 0.495699 |
fklB | y0651 | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 733296 | 621 | + | 0.520129 |
fkpA | y3977 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 4433330 | 840 | + | 0.458333 |
flgA | y2511 | flagellar basal body P-ring biosynthesis protein | chromosome | CDS | 2772500 | 765 | + | 0.517647 |
flgJ | y2502 | flagellar biosynthesis protein | chromosome | CDS | 2765093 | 945 | - | 0.540741 |
flgN | y2514 | flagellar biosynthesis protein | chromosome | CDS | 2773733 | 444 | + | 0.488739 |
fliJ | y2480 | flagellar protein | chromosome | CDS | 2744765 | 447 | + | 0.478747 |
fliS | y2467 | flagellar protein FliS | chromosome | CDS | 2731874 | 399 | + | 0.466165 |
fliT | y2468 | repressor of class 3a and 3b operons (RflA activity) | chromosome | CDS | 2732232 | 414 | + | 0.425121 |
glnD | y3139 | PII uridylyl-transferase | chromosome | CDS | 3450658 | 2739 | + | 0.49215 |
glnE | y3525 | adenylylating enzyme for glutamine synthetase | chromosome | CDS | 3908423 | 2883 | - | 0.527229 |
groEL | y0609 | chaperonin GroEL | chromosome | CDS | 687731 | 1647 | + | 0.504554 |
groES | y0608 | co-chaperonin GroES | chromosome | CDS | 687391 | 294 | + | 0.489796 |
grpE | y3073 | heat shock protein | chromosome | CDS | 3383536 | 579 | - | 0.47323 |
grxA | y2855 | glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase | chromosome | CDS | 3153362 | 264 | + | 0.439394 |
grxC | y0075 | glutaredoxin 3 | chromosome | CDS | 83726 | 249 | - | 0.514056 |
gst | y1968 | glutathionine S-transferase | chromosome | CDS | 2168209 | 609 | - | 0.456486 |
hflB | y0682 | integral membrane peptidase, cell division protein | chromosome | CDS | 764620 | 1944 | + | 0.46965 |
hflC | y2843 | ftsH proteinase activity modulator | chromosome | CDS | 3142789 | 927 | - | 0.399137 |
hflC | y0634 | protease specific for phage lambda cII repressor | chromosome | CDS | 716498 | 1005 | + | 0.502488 |
hflK | y0633 | protease specific for phage lambda cII repressor | chromosome | CDS | 715235 | 1260 | + | 0.503175 |
hscA | y1339 | chaperone protein HscA | chromosome | CDS | 1483166 | 1935 | + | 0.547804 |
hscB | y1338 | co-chaperone HscB | chromosome | CDS | 1482399 | 525 | + | 0.506667 |
hslJ | y2003 | heat shock protein HslJ | chromosome | CDS | 2205442 | 453 | - | 0.437086 |
hslO | y3919 | Hsp33-like chaperonin | chromosome | CDS | 4375795 | 882 | - | 0.492063 |
hslU | y0294 | ATP-dependent protease ATP-binding subunit | chromosome | CDS | 312872 | 1332 | - | 0.487988 |
hslV | y0295 | ATP-dependent protease peptidase subunit | chromosome | CDS | 314274 | 525 | - | 0.487619 |
htpG | y1064 | heat shock protein 90 | chromosome | CDS | 1198004 | 1875 | + | 0.463467 |
htpX | y1868 | heat shock protein HtpX | chromosome | CDS | 2062129 | 882 | + | 0.470522 |
htrA | y0807 | periplasmic serine protease Do | chromosome | CDS | 902759 | 1446 | + | 0.498617 |
ibpA | y4102 | heat shock protein | chromosome | CDS | 4553462 | 414 | - | 0.425121 |
ibpB | y4101 | heat shock protein | chromosome | CDS | 4552717 | 507 | - | 0.481262 |
lfgA | y3457 | flagellar basal body P-ring biosynthesis protein | chromosome | CDS | 3840808 | 918 | + | 0.486928 |
lon | y1029 | DNA-binding ATP-dependent protease La; heat shock K-protein | chromosome | CDS | 1158788 | 2409 | + | 0.479867 |
msrA | y0658 | methionine sulfoxide reductase A | chromosome | CDS | 740810 | 639 | - | 0.532081 |
nrdG | y0732 | anaerobic ribonucleotide reductase activating protein | chromosome | CDS | 815071 | 435 | - | 0.51954 |
nrdH | y1225 | glutaredoxin-like protein | chromosome | CDS | 1375806 | 237 | - | 0.447257 |
pcm | y0832 | protein-L-isoaspartate O-methyltransferase | chromosome | CDS | 931543 | 627 | + | 0.496013 |
pflA | y2792 | pyruvate formate lyase activating enzyme 1 | chromosome | CDS | 3091400 | 798 | + | 0.463659 |
ppiA | y3951 | peptidyl-prolyl cis-trans isomerase A | chromosome | CDS | 4409170 | 600 | + | 0.453333 |
ppiB | y1106 | peptidyl-prolyl cis-trans isomerase B | chromosome | CDS | 1245056 | 495 | - | 0.466667 |
ppiC | y0355 | peptidyl-prolyl cis-trans isomerase C | chromosome | CDS | 396283 | 297 | - | 0.447811 |
ptr | y3165 | protease III | chromosome | CDS | 3480752 | 2889 | - | 0.467636 |
slpA | y3698 | FKBX-type 16KD peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 4110017 | 534 | - | 0.47191 |
slyD | y3975 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) | chromosome | CDS | 4432028 | 588 | + | 0.52551 |
smpB | y3079 | SsrA-binding protein | chromosome | CDS | 3388332 | 495 | + | 0.458586 |
sms | y3737 | ATP-dependent protease | chromosome | CDS | 4155353 | 1383 | - | 0.544469 |
sohB | y2057 | protease | chromosome | CDS | 2265449 | 1047 | + | 0.483286 |
sppA | y2160 | protease IV, a signal peptide peptidase | chromosome | CDS | 2387165 | 1851 | + | 0.480281 |
sspA | y0132 | stringent starvation protein A | chromosome | CDS | 144392 | 642 | - | 0.487539 |
surA | y3681 | survival protein | chromosome | CDS | 4092544 | 1305 | + | 0.485824 |
tig | y1026 | trigger factor | chromosome | CDS | 1154781 | 1305 | + | 0.47433 |
tpx | y1990 | thiol peroxidase | chromosome | CDS | 2190007 | 576 | - | 0.473958 |
trxA | y0360 | thioredoxin 1 | chromosome | CDS | 401861 | 327 | + | 0.461774 |
trxB | y2802 | thioredoxin reductase | chromosome | CDS | 3104703 | 963 | + | 0.515057 |
trxC | y0919 | thioredoxin-like protein | chromosome | CDS | 1035512 | 438 | - | 0.502283 |
ureE | y1240 | urease accessory protein | chromosome | CDS | 1389215 | 705 | + | 0.49078 |
ureF | y1241 | urease accessory protein | chromosome | CDS | 1389941 | 687 | + | 0.490539 |
ureG | y1242 | urease accessory protein | chromosome | CDS | 1390754 | 663 | + | 0.484163 |