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2024-05-18 15:09:59

Gene list

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COG category: Cell motility
Organism: Shigella flexneri 5 str. 8401, 8401

Number of genes found: 95

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SFV_0944 putative fimbrial-like proteinchromosome CDS992301 471 + 0.454352
NA SFV_2719 head-tail preconnector gp5chromosome CDS2785586 1506 + 0.589641
NA SFV_0951 putative fimbrial-like proteinchromosome CDS998110 543 + 0.471455
NA SFV_3495 putative fimbriae usherchromosome CDS3563997 1149 - 0.443864
NA SFV_2193 putative fimbrial-like proteinchromosome CDS2225379 471 + 0.454352
NA SFV_3499 periplasmic fimbrial chaperone proteinchromosome CDS3567843 804 - 0.414179
NA SFV_3498 probable fimbrial protein remnantchromosome CDS3566720 993 - 0.437059
betA SFV_0322 choline dehydrogenasechromosome CDS338171 1671 - 0.572711
cheA SFV_1934 Chemotaxis protein cheAchromosome CDS1979104 1965 - 0.531807
cheB SFV_1929 chemotaxis-specific methylesterasechromosome CDS1973196 1050 - 0.537143
cheR SFV_1930 Chemotaxis protein methyltransferasechromosome CDS1974248 861 - 0.538908
cheW SFV_1933 positive regulator of CheA protein activitychromosome CDS1978580 504 - 0.515873
cheZ SFV_1927 Chemotaxis protein cheZchromosome CDS1972137 645 - 0.534884
exbB SFV_3057 Biopolymer transport exbB proteinchromosome CDS3120399 720 - 0.534722
ffh SFV_2860 Signal recognition particle proteinchromosome CDS2922914 1362 + 0.541116
fhiA SFV_0300 flagellar biosynthetic protein FlhAchromosome CDS314464 1740 + 0.583908
fimA SFV_4213 major type 1 subunit fimbrin (pilin)chromosome CDS4352224 549 - 0.51184
fimC SFV_4210 Chaperone protein fimC precursorchromosome CDS4350081 657 - 0.444444
fimD SFV_4209 Outer membrane usher protein fimD precursorchromosome CDS4347378 2637 - 0.482366
fimF SFV_4208 fimbrial morphologychromosome CDS4346838 531 - 0.489642
fimG SFV_4207 fimbrial morphologychromosome CDS4346322 504 - 0.529762
flgB SFV_1095 Flagellar basal body proteinchromosome CDS1136848 417 + 0.532374
flgD SFV_1097 basal-body rod modification protein FlgDchromosome CDS1137683 696 + 0.54454
flgE SFV_1098 flagellar hook protein FlgEchromosome CDS1138403 1209 + 0.514475
flgF SFV_1099 flagellar basal-body rod protein FlgFchromosome CDS1139631 756 + 0.595238
flgG SFV_1100 flagellar basal-body rod protein FlgGchromosome CDS1140524 783 + 0.535121
flgH SFV_1101 flagellar L-ring protein precursor FlgHchromosome CDS1141350 708 + 0.533898
flgI SFV_1102 flagellar P-ring protein FlgIchromosome CDS1142069 1098 + 0.534608
flgJ SFV_1103 flagellar protein FlgJchromosome CDS1143136 972 + 0.537037
flgL SFV_1105 flagellar hook-associated protein FlgLchromosome CDS1145827 954 + 0.505241
flgM SFV_1093 Negative regulator of flagellin synthesischromosome CDS1135665 294 - 0.530612
flgN SFV_1092 flagellar biosynthetic proteinchromosome CDS1135244 417 - 0.479616
flhB SFV_1921 putative part of export apparatus for flagellar proteinschromosome CDS1966898 1077 - 0.548747
fliC SFV_1967 flagellinchromosome CDS2006772 1653 - 0.481549
fliD SFV_1968 flagellar filament capping proteinchromosome CDS2008690 1407 + 0.522388
fliE SFV_1980 flagellar hook-basal body complex protein FliEchromosome CDS2021341 315 - 0.549206
fliG SFV_1982 flagellar motor switch protein FliGchromosome CDS2023592 924 + 0.561688
fliH SFV_1983 flagellar protein FliHchromosome CDS2024508 687 + 0.572052
fliI SFV_1984 flagellum-specific ATP synthasechromosome CDS2025194 1374 + 0.577875
fliK SFV_1986 flagellar hook-length control proteinchromosome CDS2026927 1128 + 0.544326
fliL SFV_1987 flagellar protein FliLchromosome CDS2028159 465 + 0.529032
fliM SFV_1988 flagellar motor switch protein FliMchromosome CDS2028583 1050 + 0.526667
fliN SFV_1989 flagellar motor switch protein FliNchromosome CDS2029629 414 + 0.557971
fliP SFV_1991 flagellar biosynthetic protein FliPchromosome CDS2030410 738 + 0.53794
fliQ SFV_1992 flagellar biosynthetic protein FliQchromosome CDS2031157 270 + 0.511111
fliR SFV_1993 flagellar biosynthetic protein FliRchromosome CDS2031435 786 + 0.47201
fliS SFV_1969 flagellar protein FliSchromosome CDS2010121 411 + 0.484185
hofC SFV_0097 Protein transport protein hofCchromosome CDS112694 1203 - 0.523691
hofQ SFV_3396 putative transport porteinchromosome CDS3450595 1161 - 0.544358
hopD SFV_3341 putative leader peptidasechromosome CDS3399916 468 + 0.478632
htrB SFV_1077 heat shock proteinchromosome CDS1121489 984 - 0.520325
lpfA SFV_3774 putative major fimbrial subunitchromosome CDS3865552 573 + 0.474695
lpfC SFV_3777 putative long polar fimbriaechromosome CDS3868267 2520 + 0.470238
lspA SFV_0021 prolipoprotein signal peptidase (SPase II)chromosome CDS24228 495 + 0.539394
malK SFV_4179 ATP-binding component of transport system for maltosechromosome CDS4313289 1116 - 0.547491
mbhA SFV_0301 putative motility proteinchromosome CDS313734 786 - 0.522901
motA SFV_1936 flagellar motor proteinchromosome CDS1981996 888 - 0.518018
motB SFV_1935 flagellar motor proteinchromosome CDS1981073 927 - 0.532902
msbB SFV_1857 lipid A biosynthesis proteinchromosome CDS1903714 1026 - 0.509747
ppdD SFV_0099 prelipin peptidase dependent proteinchromosome CDS115043 441 - 0.530612
secD SFV_0373 SecDchromosome CDS391277 1815 + 0.533884
secG SFV_3205 protein export - membrane proteinchromosome CDS3278014 408 - 0.492647
sfmA SFV_0488 putative fimbrial-like proteinchromosome CDS514289 525 + 0.44381
sfmF SFV_0494 putative fimbrial-like proteinchromosome CDS519076 516 + 0.503876
spy SFV_1477 periplasmic proteinchromosome CDS1522283 486 + 0.50823
tap SFV_1931 lambdoid prophage Qin Tail fiber assembly protein-like proteinchromosome CDS1975127 1602 - 0.539326
tar SFV_1932 methyl-accepting chemotaxis protein IIchromosome CDS1976774 1662 - 0.526474
tolB SFV_0596 translocation protein TolB precursorchromosome CDS621322 1293 - 0.532096
trg SFV_1784 methyl-accepting chemotaxis protein IIIchromosome CDS1825169 1641 - 0.508836
tsr SFV_4386 methyl-accepting chemotaxis protein Ichromosome CDS4525020 1665 + 0.539339
ybbJ SFV_0461 hypothetical proteinchromosome CDS488369 447 - 0.581656
ybgD SFV_0616 putative fimbrial-like proteinchromosome CDS647357 567 + 0.47619
ybgP SFV_0618 putative chaperonechromosome CDS650448 732 + 0.495902
ybgQ SFV_0617 putative outer membrane proteinchromosome CDS647932 2502 + 0.493605
ycaH SFV_0916 tetraacyldisaccharide 4'-kinasechromosome CDS959089 987 + 0.547112
ycbF SFV_0953 putative chaperonechromosome CDS999141 738 + 0.512195
ycbR SFV_0948 putative chaperonechromosome CDS993712 702 + 0.448718
ycbS SFV_0949 putative outer membrane proteinchromosome CDS994438 2601 + 0.478662
yccC SFV_0990 hypothetical proteinchromosome CDS1038589 2181 - 0.504356
yegH SFV_2122 putative transport proteinchromosome CDS2146099 1650 + 0.523636
yehB SFV_2164 putative outer membrane proteinchromosome CDS2196259 2481 - 0.455462
yehC SFV_2165 putative chaperonechromosome CDS2198755 564 - 0.384752
yfcS SFV_2405 putative chaperonechromosome CDS2453699 723 - 0.485477
yfjD SFV_2858 hypothetical proteinchromosome CDS2920649 1263 - 0.509105
yidC SFV_3807 60 kDa inner-membrane proteinchromosome CDS3900163 1596 - 0.538847
yifL SFV_3691 hypothetical proteinchromosome CDS3777232 204 - 0.52451
yigU SFV_3660 hypothetical proteinchromosome CDS3747016 777 - 0.513514
yihK SFV_3630 putative GTP-binding factorchromosome CDS3710087 1698 - 0.531213
yiiO SFV_3580 Uncharacterized periplasmic proteinchromosome CDS3660071 501 - 0.500998
yjaI SFV_4074 hypothetical proteinchromosome CDS4191428 567 - 0.516755
yoaE SFV_1413 putative transport proteinchromosome CDS1459253 1551 + 0.539007
yohG SFV_2214 putative channel/filament proteinschromosome CDS2243803 1527 - 0.544204
yraI SFV_3171 putative chaperonechromosome CDS3242618 696 + 0.449713
yraK SFV_3175 putative fimbrial proteinchromosome CDS3247205 1092 + 0.478938
yrfC SFV_3399 hypothetical proteinchromosome CDS3452563 540 - 0.555556