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2024-05-18 14:43:53

Gene list

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COG category: Cell motility
Organism: Shigella flexneri 2a str. 301, 301

Number of genes found: 80

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SF3992 hypothetical proteinchromosome CDS4120936 369 + 0.479675
NA SF3511 hypothetical proteinchromosome CDS3603586 1149 - 0.442994
NA SF2409 similar to fimbrial proteinchromosome CDS2458261 525 - 0.455238
NA SF0944 putative fimbrial-like proteinchromosome CDS990458 564 + 0.473404
NA SF0943 putative fimbrial-like proteinchromosome CDS989956 543 + 0.471455
NA SF2413 hypothetical proteinchromosome CDS2460544 786 - 0.529262
NA SF0710 putative tail component of prophage CP-933Kchromosome CDS734622 747 + 0.555556
NA SF0463 hypothetical proteinchromosome CDS478218 501 + 0.431138
NA SF1205 putative adhesion and penetration proteinchromosome CDS1249891 2868 - 0.498954
NA SF1892 putative tail component of prophage CP-933Kchromosome CDS1932220 741 - 0.556005
cheA SF1937 chemotaxis protein CheAchromosome CDS1971989 1965 - 0.531807
cheB SF1932 chemotaxis-specific methylesterasechromosome CDS1966081 1050 - 0.537143
cheR SF1933 response regulator for chemotaxis; protein glutamate methyltransferasechromosome CDS1967133 861 - 0.538908
cheW SF1936 positive regulator of CheA protein activitychromosome CDS1971465 504 - 0.515873
cheZ SF1930 chemotaxis protein CheZchromosome CDS1965022 645 - 0.533333
fhiA SF0278 flagellar biosynthetic protein FlhAchromosome CDS295763 1740 - 0.584483
fimA SF4208 major type 1 subunit fimbrin (pilin)chromosome CDS4381556 549 - 0.510018
fimC SF4206 periplasmic chaperonechromosome CDS4380190 726 - 0.442149
fimF SF4202 minor fimbrial subunit, precursor polypeptidechromosome CDS4376171 531 - 0.489642
fimG SF4201 minor fimbrial subunit, precursor polypeptidechromosome CDS4375655 504 - 0.527778
fimI SF4207 fimbrial proteinchromosome CDS4380952 639 - 0.499218
flgA SF1078 flagellar basal body P-ring biosynthesis proteinchromosome CDS1117965 660 - 0.521212
flgB SF1079 flagellar basal body rod proteinchromosome CDS1118779 417 + 0.539568
flgE SF1080 flagellar hook proteinchromosome CDS1119614 1929 + 0.524624
flgG SF1082 flagellar basal body rod protein flgGchromosome CDS1122451 783 + 0.533844
flgH SF1083 flagellar L-ring protein precursorchromosome CDS1123286 699 + 0.53505
flgI SF1084 flagellar P-ring protein precursorchromosome CDS1123996 1098 + 0.533698
flgJ SF1085 flagellar biosynthesis proteinchromosome CDS1125093 942 + 0.539278
flgM SF1077 flagellar protein FlgMchromosome CDS1117596 294 - 0.530612
flgN SF1076 flagella synthesis protein FlgNchromosome CDS1117175 417 - 0.479616
flhB SF1924 flagellar biosynthesis proteinchromosome CDS1959784 1194 - 0.551089
fliC SF1966 flagellar biosynthesis proteinchromosome CDS1998100 1653 - 0.482154
fliD SF1967 flagellar hook-associated proteinchromosome CDS2000018 1407 + 0.522388
fliE SF1982 flagellar basal body proteinchromosome CDS2012670 315 - 0.549206
fliG SF1984 flagellar motor proteinchromosome CDS2014850 996 + 0.562249
fliH SF1985 flagellar assembly proteinchromosome CDS2015838 687 + 0.572052
fliI SF1986 flagellum-specific ATP synthasechromosome CDS2016524 1374 + 0.580058
fliJ SF1987 flagellar proteinchromosome CDS2017916 345 + 0.498551
fliK SF1988 flagellar hook-length control proteinchromosome CDS2018257 1128 + 0.544326
fliL SF1989 flagellar biosynthesis proteinchromosome CDS2019489 465 + 0.529032
fliM SF1990 flagellar motor switch proteinchromosome CDS2019958 1005 + 0.530348
fliN SF1991 flagellar motor switch proteinchromosome CDS2020959 414 + 0.557971
fliO SF1992 flagellar protein FliOchromosome CDS2021435 306 + 0.562092
fliP SF1993 flagellar biosynthesis proteinchromosome CDS2021863 615 + 0.520325
fliQ SF1994 flagellar biosynthesis proteinchromosome CDS2022487 270 + 0.511111
fliR SF1995 flagellar biosynthesis proteinchromosome CDS2022765 786 + 0.47201
fliS SF1968 flagellar protein FliSchromosome CDS2001449 411 + 0.481752
hofC SF0103 putative integral membrane proteinchromosome CDS113024 1203 - 0.525353
hopD SF3354 putative leader peptidasechromosome CDS3438033 288 + 0.465278
lpfA SF3807 putative major fimbrial subunitchromosome CDS3916796 573 - 0.474695
lpfC SF3723 putative long polar fimbriaechromosome CDS3831823 2523 + 0.470075
mbhA SF0277 flagellar motor proteinchromosome CDS297447 786 + 0.522901
motA SF1939 flagellar motor proteinchromosome CDS1974881 888 - 0.516892
motB SF1938 flagellar motor proteinchromosome CDS1973958 927 - 0.530744
mxiD CP0145 MxiD, outermembrane protein of the secretin family, component of the Mxi-Spa secretion machinerypCP301 CDS123950 1701 + 0.33157
nfrB SF0470 bacteriophage N4 receptor, outer membrane proteinchromosome CDS484845 2238 - 0.521448
ppdD SF0105 prelipin peptidase dependent proteinchromosome CDS115373 441 - 0.530612
sfmA SF0461 putative fimbrial-like proteinchromosome CDS476700 576 + 0.4375
sfmC SF0462 putative chaperonechromosome CDS477495 693 + 0.431457
spa33 CP0152 Spa33, component of the Mxi-Spa secretion machinerypCP301 CDS131944 747 + 0.314592
spa40 CP0156 type III secretion proteinpCP301 CDS134397 1029 + 0.317784
spa47 CP0149 type III secretion system ATPasepCP301 CDS129227 1293 + 0.392111
spy SF1483 periplasmic proteinchromosome CDS1519826 486 + 0.50823
tap SF1934 methyl-accepting chemotaxis protein IV, peptide sensor receptorchromosome CDS1968012 1602 - 0.538702
tar SF1935 methyl-accepting chemotaxis protein II, aspartate sensor receptorchromosome CDS1969659 1662 - 0.527076
trg SF1789 methyl-accepting chemotaxis protein III, ribose sensor receptorchromosome CDS1825835 1641 - 0.508836
tsr SF4386 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS4557945 1665 + 0.53994
ybgD SF0578 putative fimbrial-like proteinchromosome CDS604259 567 + 0.47619
ybgP SF0580 putative chaperonechromosome CDS607350 732 + 0.494536
ybgQ SF0579 putative outer membrane proteinchromosome CDS604876 2460 + 0.493902
ycbF SF0945 putative chaperonechromosome CDS990987 738 + 0.509485
ycbS SF0941 putative outer membrane proteinchromosome CDS986284 2601 + 0.478278
yehB SF2171 putative outer membrane proteinchromosome CDS2193959 2481 - 0.455865
yehD SF2175 putative fimbrial-like proteinchromosome CDS2197986 525 - 0.405714
yggR SF2942 putative transport proteinchromosome CDS3032395 1026 - 0.540936
yifL SF3886 putative outer membrane lipoproteinchromosome CDS4006228 204 + 0.52451
yjaI SF4074 hypothetical proteinchromosome CDS4220245 567 - 0.516755
yraI SF3181 putative chaperonechromosome CDS3278961 696 + 0.448276
yraK SF3186 putative fimbrial proteinchromosome CDS3283548 1092 + 0.478938
yrfC SF3412 hypothetical proteinchromosome CDS3490649 540 - 0.553704