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2024-05-18 06:26:59

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2

Number of genes found: 239

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Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t1414 putative ABC transporter periplasmic binding proteinchromosome CDS1458760 903 - 0.51938
NA t1703 ABC transporter integral membrane subunitchromosome CDS1767817 1311 - 0.546148
NA t2151 hypothetical proteinchromosome CDS2214118 834 - 0.317746
NA t2070 hypothetical proteinchromosome CDS2132596 996 + 0.574297
NA t2351 outer membrane proteinchromosome CDS2417022 1134 - 0.498236
NA t2569 Rhs-family proteinchromosome CDS2645735 4065 - 0.598278
NA t0772 putative glycosyl transferasechromosome CDS863277 1221 + 0.565111
NA t3812 putative glycosyl transferasechromosome CDS3932248 1035 + 0.479227
NA t4257 hypothetical proteinchromosome CDS4425085 552 + 0.514493
NA t1585 muconate lactonizing enzyme family proteinchromosome CDS1645181 966 - 0.574534
NA t1079 hypothetical proteinchromosome CDS1161527 735 - 0.52517
NA t4164 putative type-I secretion proteinchromosome CDS4309650 1308 + 0.365443
NA t0591 putative MR-MLE-family proteinchromosome CDS669092 1203 + 0.43059
NA t3907 hypothetical proteinchromosome CDS4041590 2061 + 0.546337
NA t1379 hypothetical proteinchromosome CDS1432088 729 - 0.603567
NA t1644 putative outer membrane proteinchromosome CDS1703368 639 - 0.533646
NA t2899 N-acetylmuramoyl-L-alanine amidasechromosome CDS2982788 1254 - 0.533493
NA t3935 putative HlyD-family secretion proteinchromosome CDS4073875 1068 + 0.607678
NA t3686 possible racemasechromosome CDS3797867 1194 - 0.531826
NA t1058 putative lipoproteinchromosome CDS1141838 582 + 0.560137
NA t2646 putative type I secretion proteinchromosome CDS2733252 1164 + 0.533505
NA t2644 putative type I secretion proteinchromosome CDS2729658 1410 + 0.569504
NA t0457 lipid A biosynthesis lauroyl acyltransferasechromosome CDS529332 921 - 0.541802
NA t2001 putative oxidoreductasechromosome CDS2061850 1014 + 0.548323
NA t3916 putative phosphosugar-binding proteinchromosome CDS4053710 855 + 0.508772
NA t2382 integral membrane protein AefAchromosome CDS2450351 3363 - 0.524234
NA t1459 putative secreted hydrolasechromosome CDS1502243 1092 + 0.477106
NA t2956 possible lipoproteinchromosome CDS3045592 753 - 0.539177
NA t3188 hypothetical proteinchromosome CDS3279648 636 - 0.586478
NA t4178 hypothetical proteinchromosome CDS4340555 690 + 0.584058
NA t0804 hypothetical proteinchromosome CDS897883 825 + 0.568485
NA t4165 putative type-I secretion proteinchromosome CDS4310954 1278 + 0.341158
NA t0641 putative lipoproteinchromosome CDS724097 573 - 0.495637
NA t1207 putative outer membrane proteinchromosome CDS1274753 759 + 0.503294
NA t3822 putative racemasechromosome CDS3941984 1197 - 0.544695
NA t2000 hypothetical proteinchromosome CDS2060321 1434 + 0.582287
NA t1567 hypothetical proteinchromosome CDS1627441 1032 + 0.445736
NA t1138 hypothetical proteinchromosome CDS1211157 1134 - 0.486772
NA t0647 hypothetical proteinchromosome CDS728721 666 + 0.387387
NA t3513 alanine racemasechromosome CDS3611618 1107 - 0.591689
NA t3690 hypothetical proteinchromosome CDS3802658 1140 + 0.568421
NA t3378 lipopolysaccharide biosynthesis proteinchromosome CDS3478053 1047 - 0.516714
NA t3217 D-alanyl-D-alanine carboxypeptidasechromosome CDS3308672 1434 + 0.551604
NA t0566 putative lipopolysaccharide biosynthesis proteinchromosome CDS642011 1158 - 0.563903
NA t2544 possible outer membrane adhesinchromosome CDS2621088 720 + 0.429167
NA t2985 hypothetical proteinchromosome CDS3076444 861 - 0.506388
NA t1378 hypothetical proteinchromosome CDS1432088 231 - 0.601732
NA t1519 putative transferasechromosome CDS1575553 981 + 0.509684
NA t1300 putative secreted proteinchromosome CDS1364526 855 - 0.512281
NA t2157 UDP-galactopyranose mutasechromosome CDS2220752 1095 - 0.385388
NA t1165 putative outer membrane proteinchromosome CDS1232074 747 + 0.514056
NA t1341 outer membrane proteinchromosome CDS1403668 1152 - 0.478299
NA t4560 probable aspartate racemasechromosome CDS4711264 735 + 0.55102
NA t1500 putative acetyltransferasechromosome CDS1553963 516 + 0.550388
NA t2942 outer membrane proteinchromosome CDS3035952 537 - 0.486034
NA t0937 hypothetical proteinchromosome CDS1027693 1434 + 0.48954
NA t2566 Rhs-family proteinchromosome CDS2642116 2532 - 0.625987
NA t1701 ABC transporter integral membrane subunitchromosome CDS1765879 1245 - 0.535743
NA t1712 hypothetical proteinchromosome CDS1778922 825 - 0.570909
NA t0746 putative efflux system proteinchromosome CDS830448 1242 - 0.577295
NA t2155 galactosyltransferasechromosome CDS2218630 1134 - 0.36067
NA t2153 putative polysaccharide export ABC transporter ATP-binding proteinchromosome CDS2217017 711 - 0.390999
NA t2061 hypothetical proteinchromosome CDS2122657 2223 + 0.546559
NA t0572 putative MR-MLE-family proteinchromosome CDS647684 1218 + 0.535304
NA t2815 hypothetical proteinchromosome CDS2893367 951 - 0.557308
acrA t2384 acriflavin resistance protein A precursorchromosome CDS2454627 1194 + 0.553601
alr t4153 alanine racemasechromosome CDS4297812 1080 + 0.583333
alr t1075 alanine racemasechromosome CDS1156855 1071 + 0.577965
amiA t0408 probable N-acetylmuramoyl-L-alanine amidasechromosome CDS483295 870 - 0.504598
amiB t4409 N-acetylmuramoyl-L-alanine amidasechromosome CDS4559615 1320 + 0.576515
asmA t0752 putative outer membrane assembly proteinchromosome CDS839126 1857 + 0.556274
blc t4391 putative lipoproteinchromosome CDS4541229 534 - 0.522472
caiT t0075 L-carnitine/gamma-butyrobetaine antiporterchromosome CDS86494 1518 - 0.537549
cfa t1295 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS1358641 1149 - 0.488251
cld t0794 polysaccharide chain length regulatorchromosome CDS889332 984 + 0.515244
csgG t1781 assembly/transport component in curli productionchromosome CDS1842050 834 + 0.48801
cutF t0243 copper homeostasis protein CutF precursorchromosome CDS279270 702 + 0.551282
dacA t2230 D-alanine carboxypeptidasechromosome CDS2296697 1212 + 0.520627
dacC t2033 D-alanyl-D-alanine carboxypeptidasechromosome CDS2089966 1203 - 0.53616
dapA t0370 dihydrodipicolinate synthasechromosome CDS439617 879 + 0.538112
ddl t2484 D-alanylalanine synthetasechromosome CDS2554963 1095 + 0.522374
ddl t0134 D-alanylalanine synthetasechromosome CDS154017 921 + 0.54506
dgkA t4142 diacylglycerol kinasechromosome CDS4288544 369 + 0.501355
fcl t0765 GDP-fucose synthetasechromosome CDS853371 966 + 0.599379
flgJ t1738 flagellar biosynthesis proteinchromosome CDS1805505 951 - 0.564669
ftsI t1042 penicillin-binding proteinchromosome CDS1124200 1746 + 0.524055
ftsI t0126 penicillin-binding protein 3 precursorchromosome CDS143132 1767 + 0.547821
ftsQ t0135 cell division protein FtsQchromosome CDS154939 831 + 0.527076
galE t2111 UDP-glucose 4-epimerasechromosome CDS2174896 1017 + 0.552606
galF t0774 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS866089 894 + 0.516779
galU t1663 glucose-1-phosphate uridylyltransferasechromosome CDS1723312 909 - 0.49725
gidB t3646 glucose-inhibited division protein Bchromosome CDS3752919 624 + 0.512821
glmS t3658 D-fructose-6-phosphate amidotransferasechromosome CDS3763847 1830 + 0.546448
glmU t3657 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferasechromosome CDS3762288 1371 + 0.52954
gmd t0763 GDP-mannose 4,6-dehydratasechromosome CDS852247 1122 + 0.559715
gtrB t2305 bactoprenol glucosyltransferasechromosome CDS2371782 927 + 0.425027
htrB t1765 lipid A biosynthesis lauroyl acyltransferasechromosome CDS1827371 921 + 0.548317
iagB t2779 cell invasion proteinchromosome CDS2859402 483 + 0.407867
imp t0096 organic solvent tolerance protein precursorchromosome CDS105605 2355 - 0.529087
kdsA t1104 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS1188269 855 + 0.549708
kdsB t1946 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS1995156 747 - 0.570281
kdtA t3794 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS3913181 1278 - 0.549296
lepA t0274 GTP-binding protein LepAchromosome CDS312191 1800 + 0.528889
lgt t2911 prolipoprotein diacylglyceryl transferasechromosome CDS3000961 876 - 0.537671
lnt t2207 apolipoprotein N-acyltransferasechromosome CDS2272617 1539 + 0.550357
lolA t1973 outer-membrane lipoprotein carrier protein precursorchromosome CDS2028381 615 - 0.502439
lolB t1098 outer membrane lipoprotein LolB precursorchromosome CDS1182883 624 - 0.557692
lppA t1245 major outer membrane lipoproteinchromosome CDS1314060 237 - 0.514768
lppB t1244 major outer membrane lipoproteinchromosome CDS1313738 240 - 0.470833
lpxA t0229 UDP-N-acetylglucosamine acyltransferasechromosome CDS263868 789 + 0.531052
lpxB t0230 lipid-A-disaccharide synthasechromosome CDS264656 1149 + 0.559617
lpxC t0138 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS158341 918 + 0.508715
lpxD t0227 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS262278 1026 + 0.519493
lpxK t1949 tetraacyldisaccharide 4'-kinasechromosome CDS1997409 978 - 0.604294
lspA t0049 signal peptidase IIchromosome CDS56686 501 + 0.516966
lytB t0051 4-hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome CDS57793 951 + 0.567823
mdoB t4584 phosphoglycerol transferase Ichromosome CDS4739188 2292 - 0.534468
mdoH t1769 glucosyltransferase MdoHchromosome CDS1830418 2544 - 0.564072
mepA t0481 penicillin-insensitive murein endopeptidasechromosome CDS555155 825 + 0.586667
mltA t2896 membrane-bound lytic murein transglycosylase A precursorchromosome CDS2981191 1098 - 0.542805
mltB t2732 membrane-bound lytic transglycosylase B precursorchromosome CDS2815719 1080 - 0.559259
mltC t3025 membrane-bound lytic murein transglycosylase Cchromosome CDS3112043 1086 + 0.518416
mltD t2605 membrane-bound lytic murein transglycosylase d precursorchromosome CDS2680966 1368 + 0.521199
mltE t1078 membrane-bound lytic murein transglycosylase Echromosome CDS1160902 612 + 0.529412
mpl t4470 murein peptide ligasechromosome CDS4618666 1374 + 0.582242
mraW t0124 S-adenosyl-methyltransferasechromosome CDS141813 942 + 0.562633
mraY t0129 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS147721 1083 + 0.539243
mrcA t4013 penicillin-binding protein 1Achromosome CDS4166037 2577 - 0.564222
mrcB t0198 penicillin-binding protein 1bchromosome CDS225323 2523 + 0.564407
mreC t3288 rod shape-determining proteinchromosome CDS3381495 1053 - 0.585945
mreD t3287 rod shape-determining proteinchromosome CDS3381004 492 - 0.530488
msbB t0988 lipid A biosynthesis lauroyl acyltransferasechromosome CDS1075878 972 + 0.52572
mscL t4094 large-conductance mechanosensitive channelchromosome CDS4232448 414 - 0.458937
mtgA t3243 monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS3328904 729 - 0.558299
murA t3224 UDP-N-acetylglucosamine 1-carboxyvinyltransferasechromosome CDS3314916 1260 - 0.579365
murB t3489 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS3579168 1029 - 0.530612
murC t0133 UDP-N-acetylmuramate--L-alanine ligasechromosome CDS152549 1476 + 0.565041
murD t0130 UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetasechromosome CDS148806 1317 + 0.583144
murE t0127 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligasechromosome CDS144885 1488 + 0.588038
murF t0128 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami nopimelate--D-alan alanyl ligasechromosome CDS146369 1359 + 0.565121
murG t0132 N-acetylglucosaminyl transferasechromosome CDS151363 1068 + 0.61236
murI t3494 glutamate racemasechromosome CDS3586111 783 - 0.542784
nanA t3256 N-acetylneuraminate lyasechromosome CDS3348124 894 - 0.534676
nlpB t0371 putative lipoproteinchromosome CDS440512 1035 + 0.577778
nlpC t1224 putative lipoproteinchromosome CDS1290463 465 + 0.486022
nlpD t2826 lipoprotein NlpD precursorchromosome CDS2901991 1122 - 0.52139
ompA t1850 outer membrane protein Achromosome CDS1909758 1053 + 0.54416
ompC t0597 outer membrane protein Cchromosome CDS681183 1137 + 0.531223
ompF t1935 outer membrane protein F precursorchromosome CDS1979688 1092 + 0.510989
ompH t0226 outer membrane protein OmpH precursorchromosome CDS261789 486 + 0.473251
ompS t0883 outer membrane protein S1chromosome CDS984125 1185 - 0.505485
ompX t2055 outer membrane protein Xchromosome CDS2117228 516 - 0.513566
pagC t1119 outer membrane invasion proteinchromosome CDS1199398 558 + 0.422939
pal t2127 peptidoglycan-associated lipoprotein precursorchromosome CDS2188580 525 - 0.539048
pbpA t2227 penicillin-binding protein 2chromosome CDS2292398 1902 + 0.540484
pbpC t0325 penicillin-binding protein 1Cchromosome CDS372866 2316 + 0.610535
pcgL t1508 D-alanyl-D-alanine dipeptidasechromosome CDS1565445 771 - 0.473411
pgtE t0463 outer membrane protease Echromosome CDS537782 939 + 0.464324
phoE t2530 outer membrane pore protein E precursorchromosome CDS2605778 1053 + 0.470085
pilT t4248 hypothetical proteinchromosome CDS4417202 477 + 0.492662
pldA t3340 detergent-resistant phospholipase Achromosome CDS3442659 870 - 0.503448
pmrF t0565 putative lipopolysaccharide modification proteinchromosome CDS641025 984 - 0.529472
pqaB t0562 melittin resistance proteinchromosome CDS636507 1647 - 0.542805
prc t1033 tail-specific protease precursorchromosome CDS1116352 2049 + 0.517814
rfaD t3809 ADP-L-Glycero-D-mannoheptose-6-epimerasechromosome CDS3928387 933 - 0.50911
rfaE t3120 ADP-heptose synthasechromosome CDS3205555 1434 - 0.577406
rfbA t0777 TDP-glucose pyrophosphorylasechromosome CDS869391 879 + 0.444824
rfbB t0775 dTDP-glucose 4,6-dehydratasechromosome CDS867359 1086 + 0.438306
rfbC t0778 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS870270 552 + 0.400362
rfbD t0776 dTDP-4-dehydrorhamnose reductasechromosome CDS868444 900 + 0.503333
rfbE t0784 CDP-tyvelose-2-epimerasechromosome CDS875885 1017 + 0.351032
rfbF t0780 glucose-1-phosphate cytidylyltransferasechromosome CDS871817 774 + 0.435401
rfbG t0781 CDP-glucose 4,6-dehydratasechromosome CDS872595 1080 + 0.437037
rfbH t0782 putative dehydratase RfbHchromosome CDS873701 1314 + 0.442922
rfbN t0788 putative rhamnosyltransferasechromosome CDS880910 945 + 0.374603
rfbP t0791 undecaprenyl-phosphategalactosephosphotransferasechromosome CDS884786 1431 + 0.37037
rfbS t0783 paratose synthasechromosome CDS875049 840 + 0.332143
rfbU t0787 putative glycosyl transferasechromosome CDS879848 1062 + 0.341808
rfbV t0786 putative glycosyl transferasechromosome CDS878272 1002 + 0.326347
rfe t3379 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferasechromosome CDS3479111 1104 - 0.464674
rffA t3372 lipopolysaccharide biosynthesis proteinchromosome CDS3471837 1131 - 0.541998
rffD t3376 UDP-ManNAc dehydrogenasechromosome CDS3475608 1263 - 0.572447
rffG t3375 UDP-N-acetylglucosamine epimerasechromosome CDS3474541 1068 - 0.558989
rffH t3374 glucose-1-phosphate thymidylyltransferasechromosome CDS3473627 882 - 0.552154
rffM t3368 putative UDP-N-acetyl-D-mannosaminuronic acid transferasechromosome CDS3467417 741 - 0.557355
rlpA t2229 rare lipoprotein A precursorchromosome CDS2295425 1134 + 0.606702
rlpB t2220 rare lipoprotein B precursorchromosome CDS2287212 591 + 0.554992
rspA t1426 starvation sensing protein RspAchromosome CDS1470681 1215 + 0.534156
slt t4621 lytic murein transglycosylasechromosome CDS4773807 1884 + 0.572718
slyB t1313 outer membrane lipoprotein SlyB precursorchromosome CDS1374773 468 - 0.540598
tolA t2129 cell envelope integrity inner membrane protein TolAchromosome CDS2190555 1131 - 0.580902
tolC t3107 outer membrane channel precursor proteinchromosome CDS3191564 1476 + 0.522358
tonB t1649 TonB proteinchromosome CDS1706734 729 - 0.576132
tsx t2450 nucleoside-specific channel-forming protein tsx precursorchromosome CDS2520492 864 + 0.511574
tviB t4352 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenasechromosome CDS4505427 1278 - 0.43975
tviC t4351 Vi polysaccharide biosynthesis protein, epimerasechromosome CDS4504378 1047 - 0.425024
tviE t4349 Vi polysaccharide biosynthesis protein TviEchromosome CDS4500123 1737 - 0.472078
ugd t0793 UDP-glucose 6-dehydrogenasechromosome CDS888023 1167 + 0.43359
vacJ t0472 VacJ lipoprotein precursorchromosome CDS545225 756 + 0.53836
vexA t4348 Vi polysaccharide export proteinchromosome CDS4499011 1068 - 0.48221
vexB t4347 Vi polysaccharide export inner-membrane proteinchromosome CDS4498207 795 - 0.38239
vexC t4346 Vi polysaccharide export ATP-binding proteinchromosome CDS4497486 696 - 0.472701
vexD t4345 Vi polysaccharide export inner-membrane proteinchromosome CDS4496159 1305 - 0.462835
waaB t3800 lipopolysaccharide 1,6-galactosyltransferasechromosome CDS3919024 1080 + 0.398148
waaC t3807 lipopolysaccharide heptosyltransferase-1chromosome CDS3926385 954 - 0.541929
waaF t3808 ADP-heptose-LPS heptosyltransferase IIchromosome CDS3927338 1047 - 0.581662
waaG t3796 lipopolysaccharide core biosynthesis proteinchromosome CDS3915934 1125 + 0.480889
waaI t3801 lipopolysaccharide 1,3-galactosyltransferasechromosome CDS3920109 1014 + 0.37574
waaJ t3802 lipopolysaccharide 1,2-glucosyltransferasechromosome CDS3921140 1011 + 0.347181
waaK t3805 lipopolysaccharide 1,2-N-acetylglucosaminetransferasechromosome CDS3923929 1146 + 0.415358
waaQ t3795 lipopolysaccharide core biosynthesis proteinchromosome CDS3914903 1035 + 0.477295
wcaA t0757 hypothetical proteinchromosome CDS847159 843 + 0.505338
wcaC t0759 putative glycosyl transferasechromosome CDS848489 1218 + 0.552545
wcaE t0761 putative glycosyl transferasechromosome CDS850907 747 + 0.491299
wcaI t0766 putative glycosyl transferasechromosome CDS854809 1224 + 0.576797
wcaJ t0769 putative extracellular polysaccharide biosynthesis proteinchromosome CDS859006 1395 + 0.535484
wecB t3377 UDP-N-acetyl-D-glucosamine 2-epimerasechromosome CDS3476867 1131 - 0.520778
wza t0754 putative polysaccharide export proteinchromosome CDS843322 1140 + 0.539474
wzc t0756 putative tyrosine-protein kinasechromosome CDS844913 2160 + 0.538889
yaeL t0224 hypothetical proteinchromosome CDS257871 1353 + 0.529933
yaeT t0225 outer membrane protein precursorchromosome CDS259255 2412 + 0.526534
yajG t2415 putative lipoproteinchromosome CDS2488256 579 + 0.521589
ybdG t2292 hypothetical proteinchromosome CDS2362591 1248 + 0.492788
ybjY t1992 hypothetical proteinchromosome CDS2049649 1119 - 0.531725
yebA t0987 hypothetical proteinchromosome CDS1074442 1320 + 0.544697
yehZ t0690 putative periplasmic proteinchromosome CDS777363 918 + 0.54902
yfeN t0434 hypothetical proteinchromosome CDS507395 762 - 0.455381
yfhD t0290 hypothetical proteinchromosome CDS326938 1428 - 0.523109
ygcX t2869 probable glucarate dehydratase 1chromosome CDS2951973 1341 - 0.552573
ygcY t2870 probable glucarate dehydratase 2chromosome CDS2953334 1341 - 0.567487
ygeA t2925 hypothetical proteinchromosome CDS3017833 708 - 0.538136
yhjO t3898 putative catalytic subunit of a polysaccharide biosynthesis proteinchromosome CDS4024596 2625 + 0.555429
yiaD t3874 putative outer membrane proteinchromosome CDS4000454 663 - 0.59276
yjeP t4399 hypothetical proteinchromosome CDS4548717 3327 - 0.566276
yohG t0683 putative lipoproteinchromosome CDS768089 1437 + 0.580376
yohK t0673 puatative membrane proteinchromosome CDS759342 696 - 0.561782
ytfB t4447 hypothetical proteinchromosome CDS4591523 636 - 0.575472
ytfG t4454 hypothetical proteinchromosome CDS4599455 849 - 0.573616
ytfM t4463 hypothetical proteinchromosome CDS4608048 1734 + 0.532872