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2024-05-18 13:41:41

Gene list

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COG category: Replication, recombination and repair
Organism: Escherichia coli 536, 536

Number of genes found: 208

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli 536, 536
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECP_2225 hypothetical protein YejHchromosome CDS2321479 1761 + 0.537195
NA ECP_3842 putative transposasechromosome CDS4012135 783 + 0.50447
NA ECP_0191 ribonuclease HIIchromosome CDS208701 597 + 0.562814
NA ECP_2019 putative transposasechromosome CDS2093877 1197 + 0.577277
NA ECP_0457 nuclease sbcCD subunit Dchromosome CDS483242 1227 - 0.530562
NA ECP_3820 hypothetical proteinchromosome CDS3988997 363 - 0.501377
NA ECP_1325 DNA topoisomerase Ichromosome CDS1354114 2640 + 0.517424
NA ECP_0953 hypothetical protein YcbYchromosome CDS1011218 2109 + 0.541015
NA ECP_1809 dATP pyrophosphohydrolasechromosome CDS1860033 444 - 0.529279
NA ECP_4312 putative transposasechromosome CDS4522779 723 + 0.489627
NA ECP_4549 probable transposase proteinchromosome CDS4757034 336 + 0.502976
NA ECP_4005 integrase/recombinase XerCchromosome CDS4179162 897 + 0.54738
NA ECP_3838 putative reverse transcriptasechromosome CDS4008032 1233 - 0.480941
NA ECP_2659 RecA proteinchromosome CDS2799590 1062 - 0.538606
NA ECP_3745 hypothetical DNA ligase-like protein YicFchromosome CDS3923961 1686 - 0.526097
NA ECP_0158 ATP-dependent helicase HrpBchromosome CDS167554 2430 + 0.565021
NA ECP_1091 DNA polymerase III, delta' subunitchromosome CDS1146640 1005 + 0.540299
NA ECP_3834 putative transposasechromosome CDS4003883 531 - 0.570621
NA ECP_0453 recombination associated protein RdgCchromosome CDS476579 912 - 0.51864
NA ECP_3355 hypothetical adenine-specific methylase YhdJchromosome CDS3521543 885 + 0.481356
NA ECP_4268 replicative DNA helicasechromosome CDS4474588 1416 + 0.531073
NA ECP_3563 putative transposasechromosome CDS3727236 723 - 0.489627
NA ECP_3236 hypothetical protein YraNchromosome CDS3405845 396 + 0.545455
NA ECP_0279 putative transposasechromosome CDS300321 384 - 0.536458
NA ECP_4762 putative deoxyribonuclease YjjVchromosome CDS4911649 780 + 0.54359
NA ECP_1132 truncated integrasechromosome CDS1187383 489 - 0.427403
NA ECP_4572 modification methylasechromosome CDS4779264 1047 - 0.377268
NA ECP_3804 putative transposasechromosome CDS3976498 465 - 0.496774
NA ECP_2990 probable transposase proteinchromosome CDS3155229 303 - 0.445545
NA ECP_2843 (di)nucleoside polyphosphate hydrolasechromosome CDS2999102 531 - 0.491525
NA ECP_1092 putative deoxyribonuclease YcfHchromosome CDS1147655 798 + 0.513784
NA ECP_0501 DNA-binding protein HU-betachromosome CDS528679 273 + 0.494505
NA ECP_3837 putative transposasechromosome CDS4007002 693 + 0.470418
NA ECP_1807 crossover junction endodeoxyribonuclease RuvCchromosome CDS1858708 522 - 0.555556
NA ECP_3972 putative ATP-dependent RNA helicase RhlBchromosome CDS4147282 1266 - 0.525276
NA ECP_2498 hypothetical protein YfgEchromosome CDS2616157 747 - 0.532798
NA ECP_0274 phage integrasechromosome CDS294409 1161 - 0.491817
NA ECP_0906 putative polynucleotide enzymechromosome CDS951776 1344 + 0.536458
NA ECP_2578 ATP-dependent RNA helicase SrmBchromosome CDS2718306 1335 + 0.546067
NA ECP_3901 DNA replication and repair protein RecFchromosome CDS4064645 1074 - 0.544693
NA ECP_3530 hypothetical DNA helicasechromosome CDS3692810 2097 - 0.494039
NA ECP_0382 putative phage integrasechromosome CDS406588 564 - 0.41844
NA ECP_0413 IS putative transposasechromosome CDS438889 603 - 0.490879
NA ECP_2831 exodeoxyribonuclease V alpha chainchromosome CDS2981289 1827 - 0.548987
NA ECP_4755 DNA polymerase III, psi subunitchromosome CDS4905971 414 + 0.584541
NA ECP_0998 insertion element (orfB)chromosome CDS1057552 603 + 0.490879
NA ECP_2045 putative radC-like protein YeeSchromosome CDS2115981 477 + 0.572327
NA ECP_0220 ribonuclease HIchromosome CDS239825 468 - 0.495726
NA ECP_3250 probable ATP-dependent RNA helicase DeaDchromosome CDS3416421 1890 - 0.558201
NA ECP_2543 IS putative transposasechromosome CDS2677825 522 + 0.463602
NA ECP_0813 probable ATP-dependent helicase DinGchromosome CDS848649 2151 + 0.544398
NA ECP_2939 endonuclease I precursorchromosome CDS3108165 708 + 0.535311
NA ECP_1133 putative IS100 transposase (putative ATP-binding protein)chromosome CDS1188067 780 - 0.503846
NA ECP_3845 putative transposasechromosome CDS4014426 381 - 0.514436
NA ECP_0923 integration host factor beta-subunitchromosome CDS974388 285 + 0.491228
NA ECP_4566 hypothetical proteinchromosome CDS4773155 141 - 0.496454
NA ECP_3833 putative transposasechromosome CDS4003655 207 - 0.458937
NA ECP_4446 primosomal replication protein Nchromosome CDS4655049 315 + 0.520635
NA ECP_0342 phage integrasechromosome CDS360942 1320 - 0.393939
NA ECP_1687 hypothetical protein YdjQchromosome CDS1736181 888 + 0.505631
NA ECP_0968 helicase IVchromosome CDS1027751 2148 + 0.52095
NA ECP_2274 DNA gyrase subunit Achromosome CDS2373842 2628 - 0.53653
NA ECP_2025 transposase for insertion sequence IS100chromosome CDS2097976 1023 - 0.527859
NA ECP_1804 holliday junction DNA helicase RuvBchromosome CDS1856197 1011 - 0.525223
NA ECP_1389 methylated-DNA-protein-cysteinemethyltransferasechromosome CDS1420605 516 - 0.532946
NA ECP_1462 hypothetical H repeat-associated protein of Rhs elementchromosome CDS1504052 144 + 0.354167
NA ECP_0787 putative virulence protein GipAchromosome CDS822759 1131 + 0.506631
NA ECP_4551 putative transposasechromosome CDS4758208 1077 + 0.485608
NA ECP_1578 endonuclease IIIchromosome CDS1630886 636 + 0.481132
NA ECP_0101 mutator MutT proteinchromosome CDS112362 399 + 0.493734
NA ECP_0061 DNA polymerase IIchromosome CDS64144 2352 - 0.555272
NA ECP_0811 putative ATP-dependent RNA helicase RhlEchromosome CDS846751 1362 + 0.561674
NA ECP_0891 hypothetical protein YbjDchromosome CDS930206 1659 + 0.532851
NA ECP_0347 insertion element IS1 1/2/3/5/6 protein InsAchromosome CDS368773 216 + 0.476852
NA ECP_4209 NADH pyrophosphatasechromosome CDS4407820 774 + 0.531008
NA ECP_2711 DNA mismatch repair protein MutSchromosome CDS2849946 2562 + 0.556987
NA ECP_0343 CP4-like integrasechromosome CDS362627 339 + 0.457227
NA ECP_0481 exodeoxyribonuclease VII small subunitchromosome CDS508328 243 - 0.539095
NA ECP_0997 insertion element (orfA)chromosome CDS1056806 522 + 0.463602
NA ECP_3795 putative transposasechromosome CDS3970450 291 + 0.501718
NA ECP_0593 putative DNA integration/recombination/invertion proteinchromosome CDS621058 309 - 0.469256
NA ECP_3773 putative transposasechromosome CDS3955801 783 - 0.50447
NA ECP_4676 type I restriction enzyme EcoEI specificity proteinchromosome CDS4874693 1707 - 0.425893
NA ECP_2834 exodeoxyribonuclease V gamma chainchromosome CDS2989714 3369 - 0.533096
NA ECP_3558 putative methylase YhhFchromosome CDS3722802 597 + 0.541039
NA ECP_4611 putative transposase OrfB protein of insertion sequence IS629chromosome CDS4817864 891 - 0.539843
NA ECP_0670 DNA polymerase III, delta subunitchromosome CDS704435 1032 - 0.527132
NA ECP_1598 ribonuclease Tchromosome CDS1647708 648 + 0.54321
NA ECP_2885 single-stranded-DNA-specific exonuclease RecJchromosome CDS3055256 1734 - 0.569781
NA ECP_1805 holliday junction DNA helicase RuvAchromosome CDS1857216 612 - 0.531046
NA ECP_1397 ATP-independent RNA helicase DbpAchromosome CDS1428811 1374 + 0.515284
NA ECP_1129 putative nudix hydrolase YmfBchromosome CDS1184723 462 - 0.510823
NA ECP_1180 minor tail protein precursor Hchromosome CDS1217917 2568 + 0.580218
NA ECP_2591 putative transposasechromosome CDS2731637 333 - 0.552553
NA ECP_1155 crossover junction endodeoxyribonuclease RusAchromosome CDS1201487 363 + 0.53168
NA ECP_4054 deoxyribonuclease TatDchromosome CDS4229499 795 + 0.544654
NA ECP_0516 putative methyltransferasechromosome CDS543223 312 - 0.570513
NA ECP_2567 DNA repair protein RecOchromosome CDS2707156 729 - 0.540466
NA ECP_3848 hypothetical proteinchromosome CDS4016243 204 - 0.519608
NA ECP_2616 DNA repair protein RecNchromosome CDS2759547 1662 + 0.519856
NA ECP_2053 DNA gyrase inhibitory proteinchromosome CDS2120498 474 - 0.474684
NA ECP_2435 DNA ligasechromosome CDS2550085 2016 - 0.543155
NA ECP_0708 SeqA proteinchromosome CDS748197 546 + 0.496337
NA ECP_0192 DNA polymerase III alpha subunitchromosome CDS209334 3483 + 0.549813
NA ECP_0727 endonuclease VIIIchromosome CDS769894 792 + 0.525253
NA ECP_1660 integration host factor alpha-subunitchromosome CDS1710039 300 - 0.5
NA ECP_3766 putative type II 5-cytosoine methyltransferasechromosome CDS3949965 948 + 0.374473
NA ECP_2943 hypothetical protein YqgFchromosome CDS3111318 417 + 0.534772
NA ECP_2091 GDP-mannose mannosyl hydrolasechromosome CDS2163583 480 - 0.55625
NA ECP_3902 DNA polymerase III, beta chainchromosome CDS4065718 1101 - 0.5495
NA ECP_1985 putative transposasechromosome CDS2068722 228 + 0.451754
NA ECP_2701 transposasechromosome CDS2838745 1038 + 0.439306
NA ECP_4213 DNA-binding protein HU-alphachromosome CDS4411198 273 + 0.483516
NA ECP_0594 putative DNA integration/recombination/invertion proteinchromosome CDS621386 300 - 0.466667
NA ECP_2294 putative nudix hydrolase YfaOchromosome CDS2401364 426 + 0.474178
NA ECP_4567 putative transposasechromosome CDS4773322 321 - 0.489097
NA ECP_2887 integrase/recombinase XerDchromosome CDS3057730 897 - 0.531773
NA ECP_4287 single-strand binding proteinchromosome CDS4499224 537 + 0.581006
NA ECP_4016 ATP-dependent DNA helicase RecQchromosome CDS4190389 1830 + 0.54153
NA ECP_3529 putative DNA processing proteinchromosome CDS3691608 1296 - 0.505401
NA ECP_3472 DNA adenine methylasechromosome CDS3621399 837 - 0.491039
NA ECP_3818 putative transposasechromosome CDS3987475 1197 - 0.576441
NA ECP_1399 truncated putative prophage integrasechromosome CDS1431300 309 - 0.508091
NA ECP_2338 hypothetical protein YfcDchromosome CDS2449921 543 - 0.535912
NA ECP_1894 DNA-cytosine methyltransferasechromosome CDS1935825 1419 - 0.520085
NA ECP_3108 topoisomerase IV subunit Achromosome CDS3273037 2259 - 0.545817
NA ECP_1711 DNA topoisomerase IIIchromosome CDS1762422 1947 - 0.544427
NA ECP_3969 ATP-dependent DNA helicase Repchromosome CDS4143593 2022 + 0.540554
NA ECP_2989 putative transposase (orfB)chromosome CDS3154363 840 - 0.528571
NA ECP_2108 DNA-3-methyladenine glycosylase IIchromosome CDS2184553 849 - 0.550059
NA ECP_4678 type I restriction enzyme EcoAI R proteinchromosome CDS4877935 2433 - 0.495684
NA ECP_3371 putative DNA topoisomerasechromosome CDS3541061 543 - 0.502762
NA ECP_4074 DNA polymerase Ichromosome CDS4252659 2787 + 0.519914
NA ECP_1705 CTP pyrophosphohydrolasechromosome CDS1754157 408 + 0.546569
NA ECP_2024 putative IS100 transposasechromosome CDS2097197 780 - 0.5
NA ECP_2199 endonuclease IVchromosome CDS2291706 858 + 0.52331
NA ECP_4211 endonuclease Vchromosome CDS4409707 672 + 0.592262
NA ECP_3338 hypothetical proteinchromosome CDS3505813 165 + 0.406061
NA ECP_1695 exodeoxyribonuclease IIIchromosome CDS1745082 819 + 0.53602
NA ECP_4616 putative transposasechromosome CDS4821922 783 - 0.50447
NA ECP_1418 ATP-dependent helicase HrpAchromosome CDS1459153 3903 + 0.537023
NA ECP_4144 primosomal protein N'chromosome CDS4324016 2199 - 0.573897
NA ECP_4646 type 1 fimbriae regulatory protein FimBchromosome CDS4846196 603 + 0.426202
NA ECP_3354 DNA-binding protein factor for inversion stimulation protein (fis)chromosome CDS3521161 297 + 0.468013
NA ECP_3126 ADP-ribose pyrophosphatasechromosome CDS3292347 630 - 0.503175
NA ECP_1788 exodeoxyribonuclease Xchromosome CDS1837970 663 + 0.514329
NA ECP_4508 DNA polymerase III, chi subunitchromosome CDS4722474 444 - 0.536036
NA ECP_4552 putative transposasechromosome CDS4759367 243 + 0.54321
NA ECP_4521 prophage P4 integrasechromosome CDS4735418 1263 + 0.457641
NA ECP_1751 probable ATP-dependent helicase YoaAchromosome CDS1803175 1911 - 0.55416
NA ECP_3765 putative phage integrasechromosome CDS3948173 1182 + 0.456853
NA ECP_1984 IS1400 transposase Bchromosome CDS2068252 480 + 0.475
NA ECP_2955 A/G-specific adenine glycosylasechromosome CDS3120731 1053 + 0.556505
NA ECP_4692 DNA replication protein DnaCchromosome CDS4898472 738 - 0.501355
NA ECP_0283 transposasechromosome CDS303560 855 - 0.549708
NA ECP_3806 putative transposasechromosome CDS3977411 840 - 0.528571
NA ECP_0319 insertion sequence ATP-binding proteinchromosome CDS339758 780 + 0.507692
NA ECP_1962 bacteriophage integrasechromosome CDS2015441 1272 + 0.513365
NA ECP_3424 putative IS100 transposasechromosome CDS3576293 780 + 0.503846
NA ECP_3158 G/U mismatch-specific DNA glycosylasechromosome CDS3326653 507 - 0.536489
NA ECP_3026 hypothetical proteinchromosome CDS3184702 552 + 0.434783
NA ECP_0503 hypothetical protein YbaV (helix-hairpin-helix DNA-binding motif)chromosome CDS531165 372 + 0.540323
NA ECP_1983 IS1400 transposase Achromosome CDS2067881 267 + 0.47191
NA ECP_3900 DNA gyrase subunit Bchromosome CDS4062202 2415 - 0.547412
NA ECP_4593 putative IS orfchromosome CDS4803604 345 + 0.501449
NA ECP_3373 hypothetical protein Smfchromosome CDS3542077 1125 - 0.508444
NA ECP_1227 UmuC proteinchromosome CDS1251657 1269 + 0.507486
NA ECP_3733 formamidopyrimidine-DNA glycosylasechromosome CDS3914813 810 - 0.545679
NA ECP_0456 exonuclease SbcCchromosome CDS480102 3144 - 0.539122
NA ECP_2055 exodeoxyribonuclease Ichromosome CDS2122465 1428 + 0.504902
NA ECP_4415 DNA mismatch repair protein MutLchromosome CDS4627029 1848 + 0.561147
NA ECP_2010 putative transposase (part)chromosome CDS2088872 162 - 0.506173
NA ECP_0721 deoxyribodipyrimidine photolyasechromosome CDS763560 1419 + 0.538407
NA ECP_0335 RadC-like DNA repair proteinchromosome CDS357452 477 + 0.580713
NA ECP_2996 putative IS100 transposasechromosome CDS3158453 780 + 0.503846
NA ECP_4007 DNA helicase IIchromosome CDS4180858 2163 + 0.576976
NA ECP_2703 putative IS100 transposasechromosome CDS2841293 780 - 0.503846
NA ECP_2962 putative P4-type integrasechromosome CDS3128357 1266 + 0.479463
NA ECP_2832 exodeoxyribonuclease V beta chainchromosome CDS2983115 3543 - 0.543607
NA ECP_0060 RNA polymerase associated proteinchromosome CDS61073 2907 - 0.552804
NA ECP_2705 putative transposasechromosome CDS2842488 303 + 0.445545
NA ECP_3243 hypothetical protein YhbQchromosome CDS3410416 303 + 0.541254
NA ECP_4631 putative DNA repair proteinchromosome CDS4834520 477 + 0.580713
NA ECP_2479 hypothetical protein YffHchromosome CDS2594787 576 - 0.486111
NA ECP_3807 putative transposasechromosome CDS3978277 303 - 0.445545
NA ECP_0221 DNA polymerase III, epsilon chainchromosome CDS240348 741 + 0.507422
NA ECP_4523 putative superfamily I DNA helicaseschromosome CDS4737132 3516 + 0.469852
NA ECP_2844 DNA mismatch repair protein MutHchromosome CDS3000317 690 + 0.533333
NA ECP_2255 alkylated DNA repair protein AlkBchromosome CDS2345715 651 - 0.53149
NA ECP_3767 putative type II 5-cytosoine methyltransferasechromosome CDS3950924 918 + 0.392157
NA ECP_4311 IS putative transposasechromosome CDS4522153 522 + 0.463602
NA ECP_1936 P4-like integrasechromosome CDS1971537 1044 + 0.528736
NA ECP_2011 putative transposasechromosome CDS2089112 858 - 0.505827
NA ECP_4677 type I restriction enzyme EcoEI M proteinchromosome CDS4876399 1506 - 0.501328
NA ECP_3483 ADP compounds hydrolase NudEchromosome CDS3631914 561 - 0.506239
NA ECP_1922 hypothetical proteinchromosome CDS1960727 1173 - 0.334186
NA ECP_0793 excinuclease ABC subunit Bchromosome CDS829558 2022 + 0.533136
NA ECP_1909 phage-related integrasechromosome CDS1947667 1221 + 0.487305
NA ECP_0260 DNA-damage-inducible protein P (DinP)chromosome CDS282222 1056 + 0.538826
NA ECP_0277 putative IS100 transposasechromosome CDS297547 780 + 0.503846
NA ECP_3156 DNA primasechromosome CDS3322793 1746 + 0.521191
NA ECP_4550 putative transposasechromosome CDS4757558 432 + 0.555556
NA ECP_0533 recombination protein RecRchromosome CDS561646 606 + 0.577558
NA ECP_1106 transcription-repair coupling factorchromosome CDS1161416 3495 - 0.545637
NA ECP_3122 topoisomerase IV subunit Bchromosome CDS3288570 1893 - 0.538299
NA ECP_1756 hypothetical protein YeaBchromosome CDS1808020 579 + 0.549223
NA ECP_3903 chromosomal replication initiator protein DnaAchromosome CDS4066823 1335 - 0.537079
NA ECP_3736 DNA repair protein RadCchromosome CDS3916361 645 - 0.485271