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2024-05-18 14:03:06

Gene list

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COG category: Replication, recombination and repair
Organism: Enterobacteria phage Fels-2

Number of genes found: 180

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Enterobacteria phage Fels-2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STM1871 chromosome misc_feature1967026 897 + 0.477146
NA STM2739 phage tail-like proteinchromosome CDS2876815 1026 + 0.497076
NA STM3846.s putative reverse transcriptasechromosome CDS4052340 936 + 0.305556
NA STM2633.S enterohemolysin 1-like proteinchromosome CDS2773893 1110 + 0.517117
NA STM2768 putative transposasechromosome CDS2910681 300 + 0.533333
NA STM4488 putative integrasechromosome CDS4731314 288 + 0.496528
NA STM0716 putative phage integrasechromosome CDS781628 567 + 0.506173
NA STM4210 putative methyl-accepting chemotaxis proteinchromosome CDS4429581 954 - 0.560797
NA STM4457 putative transposasechromosome CDS4702512 447 - 0.449664
NA STM0947 putative integrasechromosome CDS1026087 684 - 0.504386
NA STM0325 putative truncated IS3 transposasechromosome CDS369197 801 - 0.54432
NA STM2509 putative transposasechromosome CDS2622292 357 - 0.473389
NA STM3517 putative DNA-damage-inducibile proteinchromosome CDS3679971 261 - 0.45977
NA STM2769 putative transposasechromosome CDS2910977 867 + 0.539792
NA STM2599 putative virulence proteinchromosome CDS2748177 1251 + 0.53717
NA STM0298 chromosome misc_feature341178 282 + 0.446809
NA STM1301 putative mutator proteinchromosome CDS1380453 417 - 0.573142
NA STM2636 integrase-like proteinchromosome CDS2775587 1230 - 0.502439
NA STM2740 integrase-like proteinchromosome CDS2878169 1065 + 0.565258
NA STM1005 integrasechromosome CDS1098228 1293 - 0.488012
NA STM1309 putative excinuclease subunitchromosome CDS1389117 909 - 0.548955
NA STM1873 hypothetical proteinchromosome CDS1968296 354 - 0.533898
NA STM2346 putative NTP pyrophosphohydrolasechromosome CDS2458408 555 - 0.544144
NA STM0037 putative cytoplasmic proteinchromosome CDS42932 1254 + 0.499203
NA STM2702 DNA invertase-like proteinchromosome CDS2851384 558 - 0.503584
NA STM1015 DNA replication protein DnaCchromosome CDS1107230 750 + 0.525333
NA STM2745 putative inner membrane proteinchromosome CDS2883501 2070 + 0.632367
NA STM2609 DNA packaging-like proteinchromosome CDS2757539 495 - 0.521212
NA STM0297 putative transposasechromosome CDS340755 198 + 0.525253
NA STM2625 DNA replication protein DnaCchromosome CDS2767108 750 - 0.525333
NA STM0948 putative cytoplasmic proteinchromosome CDS1026941 402 - 0.502488
NA STM4449 putative regulatory proteinchromosome CDS4691448 243 + 0.497942
NA STM2740.1N hypothetical proteinchromosome CDS2879247 168 + 0.571429
NA STM2730 DNA adenine methylase-like proteinchromosome CDS2872688 858 - 0.461538
NA STM4496 putative DNA repair ATPasechromosome CDS4746985 3642 - 0.500549
NA STM2697 phage tail-like proteinchromosome CDS2846293 2808 - 0.578348
NA STM0893 putative integrasechromosome CDS962612 1326 - 0.473605
NA STM2938 putative cytoplasmic proteinchromosome CDS3078537 921 - 0.557003
NA STM0900 putative helicasechromosome CDS969999 1584 + 0.52904
NA STM2760 putative integrasechromosome CDS2900439 876 + 0.574201
NA STM2765 putative transposasechromosome CDS2907066 267 - 0.47191
ada STM2265 O6-methylguanine-DNA methyltransferase/transcription activator/repressorchromosome CDS2363134 1062 - 0.607345
alkA STM2124 3-methyl-adenine DNA glycosylase IIchromosome CDS2211488 870 - 0.614943
alkB STM2264 DNA repair system proteinchromosome CDS2362481 651 - 0.588326
dam STM3484 DNA adenine methylasechromosome CDS3638690 837 - 0.491039
dbpA STM1655 ATP-dependent RNA helicasechromosome CDS1748288 1374 - 0.55313
dcm STM1992 DNA cytosine methylasechromosome CDS2074329 1431 - 0.537386
deaD STM3280.S cysteine sulfinate desulfinasechromosome CDS3446185 1890 - 0.583069
dinG STM0821 SOS repair enzymechromosome CDS887158 2145 + 0.549184
dinP STM0313 DNA polymerase IVchromosome CDS357800 1056 + 0.514205
dnaA STM3838 chromosomal replication initiation proteinchromosome CDS4043624 1401 - 0.524625
dnaB STM4246 replicative DNA helicasechromosome CDS4466591 1416 + 0.548729
dnaC STM4543 DNA replication protein DnaCchromosome CDS4802792 738 - 0.51084
dnaE STM0231 DNA polymerase III subunit alphachromosome CDS269548 3483 + 0.559001
dnaG STM3210 DNA primasechromosome CDS3374506 1746 + 0.517755
dnaN STM3837 DNA polymerase III subunit betachromosome CDS4042519 1101 - 0.567666
dnaQ STM0264 DNA polymerase III subunit epsilonchromosome CDS303402 732 + 0.510929
dnaX STM0484 DNA polymerase III subunits gamma and tauchromosome CDS540907 1929 + 0.590461
endA STM3093 DNA-specific endonuclease Ichromosome CDS3255404 708 + 0.556497
exoX STM1878 exodeoxyribonuclease Xchromosome CDS1971072 699 + 0.519313
fis STM3385 DNA-binding protein Fischromosome CDS3556262 297 + 0.464646
gyrA STM2272 DNA gyrase subunit Achromosome CDS2373711 2637 - 0.560485
gyrB STM3835 DNA gyrase subunit Bchromosome CDS4038855 2415 - 0.554451
helD STM1075 DNA helicase IVchromosome CDS1166434 2055 + 0.555718
hepA STM0096 ATP-dependent helicase HepAchromosome CDS110002 2907 - 0.570003
himA STM1339 integration host factor alpha subunitchromosome CDS1419069 300 + 0.483333
himD STM0982 integration host factor beta subunitchromosome CDS1067620 285 + 0.501754
hin STM2772 DNA-invertase Hinchromosome CDS2914842 573 + 0.462478
holA STM0646 DNA polymerase III subunit deltachromosome CDS707489 1032 - 0.57655
holB STM1201 DNA polymerase III subunit deltachromosome CDS1284262 1005 + 0.593035
holC STM4476.S DNA polymerase III subunit chichromosome CDS4719868 444 - 0.545045
holD STM4557 DNA polymerase III subunit psichromosome CDS4812269 438 + 0.598173
hrpA STM1641 ATP-dependent helicasechromosome CDS1731334 3903 - 0.537279
hrpB STM0189 ATP-dependent helicasechromosome CDS218309 2475 + 0.593131
hupA STM4170 DNA-binding protein HU-alphachromosome CDS4386709 273 + 0.47619
hupB STM0451 DNA-binding protein HU-betachromosome CDS508105 273 + 0.494505
lig STM2427 DNA ligasechromosome CDS2539001 2016 - 0.568948
mfd STM1216 transcription-repair coupling factorchromosome CDS1298895 3447 - 0.570641
mod STM0357 DNA methylasechromosome CDS403331 1959 + 0.467586
mug STM3212 G/U mismatch-specific DNA glycosylasechromosome CDS3378372 507 - 0.532544
mutH STM3005 DNA mismatch repair proteinchromosome CDS3163381 696 + 0.577586
mutL STM4359 DNA mismatch repair proteinchromosome CDS4601693 1857 + 0.582122
mutM STM3726 formamidopyrimidine-DNA glycosylasechromosome CDS3921131 810 - 0.553086
mutS STM2909 DNA mismatch repair proteinchromosome CDS3050279 2568 + 0.570483
mutT STM0137 7,8-dihydro-8-oxoguanine-triphosphatasechromosome CDS161546 396 + 0.522727
mutY STM3110 adenine DNA glycosylasechromosome CDS3268685 1053 + 0.545109
nei STM0728 endonuclease VIIIchromosome CDS793925 792 + 0.52904
nfi STM4168 endonuclease Vchromosome CDS4385219 672 + 0.587798
nfo STM2203 endonuclease IVchromosome CDS2302659 858 + 0.539627
nth STM1453 endonuclease IIIchromosome CDS1528557 636 - 0.522013
ntpA STM1900 dATP pyrophosphohydrolasechromosome CDS1994556 453 - 0.529801
nudC STM4166 NADH pyrophosphatasechromosome CDS4383331 774 + 0.549096
ogt STM1659 O-6-alkylguanine-DNA/cysteine-protein methyltransferasechromosome CDS1753663 516 + 0.550388
parC STM3174 DNA topoisomerase IV subunit Achromosome CDS3336947 2259 - 0.562196
parE STM3181 DNA topoisomerase IV subunit Bchromosome CDS3343962 1893 - 0.55626
phrB STM0709 deoxyribodipyrimidine photolyasechromosome CDS774778 1422 + 0.56962
polA STM3999 DNA polymerase Ichromosome CDS4206131 2787 + 0.538572
polB STM0097 DNA polymerase IIchromosome CDS113082 2352 - 0.565051
priA STM4095 primosome assembly protein PriAchromosome CDS4303361 2199 - 0.591633
priB STM4392 primosomal replication protein Nchromosome CDS4630916 315 + 0.533333
priC STM0481 primosomal replication protein Nchromosome CDS539116 516 - 0.596899
radC STM3729 DNA repair protein RadCchromosome CDS3922680 666 - 0.531532
rdgC STM0392 recombination associated proteinchromosome CDS442929 912 - 0.539474
recA STM2829 recombinase Achromosome CDS2974854 1062 - 0.547081
recB STM2994 exonuclease V beta chainchromosome CDS3146108 3546 - 0.558094
recC STM2996 exonuclease V subunitchromosome CDS3152712 3372 - 0.53796
recD STM2993 exonuclease V alpha chainchromosome CDS3144276 1836 - 0.582244
recF STM3836 recombination protein Fchromosome CDS4041298 1074 - 0.547486
recG STM3744 DNA helicasechromosome CDS3936881 2082 + 0.585014
recJ STM3042 single-stranded-DNA-specific exonucleasechromosome CDS3201949 1734 - 0.573241
recN STM2684 recombination/DNA repair proteinchromosome CDS2823264 1662 + 0.548135
recO STM2579 DNA repair protein RecOchromosome CDS2723185 729 - 0.547325
recQ STM3958 ATP-dependent DNA helicasechromosome CDS4162558 1848 + 0.545996
recR STM0486 recombination protein RecRchromosome CDS543210 606 + 0.610561
rep STM3912 ATP-dependent DNA helicase repchromosome CDS4119763 2025 + 0.531852
rhlB STM3914 ATP-dependent RNA helicasechromosome CDS4123427 1266 - 0.547393
rhlE STM0820 putative ATP-dependent RNA helicasechromosome CDS885586 1365 + 0.58315
rnhA STM0263 ribonuclease Hchromosome CDS302871 468 - 0.502137
rnhB STM0230 ribonuclease HIIchromosome CDS268928 597 + 0.562814
rnt STM1434 ribonuclease Tchromosome CDS1511702 648 - 0.535494
ruvA STM1895 Holliday junction DNA helicase motor proteinchromosome CDS1990073 612 - 0.547386
ruvB STM1894 Holliday junction DNA helicase RuvBchromosome CDS1989054 1011 - 0.571711
ruvC STM1898 Holliday junction resolvasechromosome CDS1993228 522 - 0.559387
sbcB STM2067 exonuclease Ichromosome CDS2144261 1431 + 0.544375
sbcC STM0395 ATP-dependent dsDNA exonucleasechromosome CDS446241 3141 - 0.582617
sbcD STM0396 ATP-dependent dsDNA exonucleasechromosome CDS449378 1203 - 0.566085
sbmC STM2061 DNA gyrase inhibitorchromosome CDS2135405 468 - 0.508547
seqA STM0697 sequestration protein Achromosome CDS759191 543 + 0.511971
smf STM3405 putative competence proteinchromosome CDS3575680 1125 - 0.541333
srmB STM2643 ATP-dependent RNA helicasechromosome CDS2782903 1335 + 0.543071
ssb STM4256 single-strand DNA-binding proteinchromosome CDS4476286 531 + 0.596987
tag STM3642 3-methyl-adenine DNA glycosylase Ichromosome CDS3829352 582 + 0.5189
tnpA_1 STM0946 transposasechromosome CDS1025166 459 + 0.459695
tnpA_2 STM1957 transposase for IS200chromosome CDS2045735 510 - 0.460784
tnpA_3 STM2471 transposasechromosome CDS2579331 459 - 0.459695
tnpA_4 STM3032 transposasechromosome CDS3194318 459 - 0.459695
tnpA_5 STM3479 transposase for IS200chromosome CDS3635160 459 - 0.459695
tnpA_6 STM4311 transposase for IS200chromosome CDS4559416 459 + 0.459695
topA STM1714 DNA topoisomerase Ichromosome CDS1809792 2598 - 0.540416
topB STM1298 DNA topoisomerase IIIchromosome CDS1376657 1950 + 0.56359
umuC STM1997 DNA polymerase IVchromosome CDS2079892 1269 - 0.548463
ung STM2647 uracil-DNA glycosylasechromosome CDS2786608 690 + 0.550725
uvrA STM4254 excinuclease ABC subunit Achromosome CDS4473213 2826 - 0.571125
uvrB STM0798 excinuclease ABC subunit Bchromosome CDS864433 2022 + 0.553412
uvrC STM1946 excinuclease ABC subunit Cchromosome CDS2036418 1833 - 0.533552
uvrD STM3951 DNA-dependent ATPase I/helicase IIchromosome CDS4155541 2163 + 0.578363
vsr STM1991 DNA mismatch endonucleasechromosome CDS2073878 471 - 0.56051
wcaH STM2107 GDP-mannose mannosyl hydrolasechromosome CDS2191160 504 - 0.599206
xerC STM3949 tyrosine recombinasechromosome CDS4153787 903 + 0.562569
xerD STM3044 tyrosine recombinasechromosome CDS3204425 897 - 0.531773
xni STM2972 exonuclease IXchromosome CDS3123597 816 + 0.552696
xseA STM2512 exodeoxyribonuclease VII large subunitchromosome CDS2626079 1350 + 0.580741
xseB STM0424 exodeoxyribonuclease VII small subunitchromosome CDS477416 243 - 0.54321
xthA STM1302 exonuclease IIIchromosome CDS1380942 807 - 0.526642
ybaV STM0453 putative DNA uptake proteinchromosome CDS510688 375 + 0.525333
ybaZ STM0466 putative methyltransferasechromosome CDS523957 390 - 0.561538
ybjD STM0939 hypothetical proteinchromosome CDS1015860 1659 + 0.554551
ycaJ STM0962 hypothetical proteinchromosome CDS1042190 1344 + 0.570685
ycfH STM1202 putative metal-dependent hydrolasechromosome CDS1285277 798 + 0.527569
yeaB STM1825 putative NTP pyrophosphohydrolasechromosome CDS1922537 579 + 0.588946
yejH STM2223 putative ATP-dependent helicasechromosome CDS2324548 1761 + 0.570131
yfaO STM2295 putative NTP pyrophosphohydrolasechromosome CDS2402597 426 + 0.495305
yffH STM2477 putative pyrophosphohydrolasechromosome CDS2587089 576 - 0.487847
yfgE STM2496 DNA replication initiation factorchromosome CDS2609860 726 - 0.53719
ygdP STM3004 dinucleoside polyphosphate hydrolasechromosome CDS3162168 531 - 0.506591
yhbQ STM3271 hypothetical proteinchromosome CDS3438731 318 + 0.553459
yhdJ STM3386 putative methyltransferasechromosome CDS3556644 885 + 0.454237
yhhF STM3572 putative methyltransferasechromosome CDS3740347 597 + 0.566164
yhhM STM3574 putative inner membrane proteinchromosome CDS3741224 372 - 0.52957
yibL STM3689 putative cytoplasmic proteinchromosome CDS3879649 363 + 0.506887
yicF STM3739 DNA ligasechromosome CDS3931156 1686 - 0.556939
yigW STM3976.S putative hydrolasechromosome CDS4182122 795 + 0.543396
yjjV STM4564 putative hydrolasechromosome CDS4817980 774 + 0.600775
ymfB STM1235 putative MutT-like proteinchromosome CDS1322749 462 - 0.519481
yoaA STM1821 putative DNA helicasechromosome CDS1918518 1911 - 0.564103
yqgF STM3097 Holliday junction resolvase-like proteinchromosome CDS3258665 417 + 0.556355
yqiE STM3185 ADP-ribose pyrophosphatasechromosome CDS3347734 633 - 0.530806
yraN STM3265 hypothetical proteinchromosome CDS3435327 396 + 0.565657
yrdD STM3403 putative DNA topoisomerasechromosome CDS3574666 543 - 0.528545
yrfE STM3494.S putative NTP pyrophosphohydrolasechromosome CDS3649301 564 - 0.530142