Gene list
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COG category: Replication, recombination and repair
Organism: Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS
Number of genes found: 42
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
deaD | BU372 | ATP-dependent RNA helicase DeaD | chromosome | CDS | 409362 | 1806 | - | 0.330011 |
dnaA | BU012 | chromosomal replication initiator protein DnaA | chromosome | CDS | 12554 | 1365 | - | 0.29011 |
dnaB | BU546 | replicative DNA helicase | chromosome | CDS | 582063 | 1398 | + | 0.323319 |
dnaC | BU021 | DNA replication protein DnaC | chromosome | CDS | 21614 | 741 | - | 0.296896 |
dnaE | BU238 | DNA polymerase III alpha chain | chromosome | CDS | 262859 | 3486 | + | 0.261331 |
dnaG | BU056 | DNA primase | chromosome | CDS | 60941 | 1734 | - | 0.246828 |
dnaN | BU011 | DNA polymerase III beta chain | chromosome | CDS | 11449 | 1101 | - | 0.236149 |
dnaQ | BU248 | DNA polymerase III epsilon chain | chromosome | CDS | 277113 | 714 | + | 0.235294 |
dnaX | BU481 | DNA polymerase III subunits gamma and tau | chromosome | CDS | 531231 | 1086 | + | 0.274401 |
endA | BU409 | endonuclease I | chromosome | CDS | 446639 | 753 | + | 0.266932 |
fis | BU400 | factor-for-inversion stimulation protein | chromosome | CDS | 437630 | 297 | - | 0.239057 |
gyrA | BU180 | DNA gyrase subunit A | chromosome | CDS | 195562 | 2493 | - | 0.297232 |
gyrB | BU010 | DNA gyrase subunit B | chromosome | CDS | 8911 | 2412 | - | 0.281095 |
himA | BU131 | integration host factor alpha-subunit | chromosome | CDS | 137200 | 309 | + | 0.265372 |
himD | BU308 | integration host factor beta-subunit | chromosome | CDS | 340821 | 285 | - | 0.287719 |
holA | BU445 | DNA polymerase III delta subunit | chromosome | CDS | 486500 | 996 | + | 0.172691 |
holB | BU354 | DNA polymerase III delta' subunit | chromosome | CDS | 386618 | 981 | + | 0.2579 |
hupA | BU032 | DNA-binding protein hu-alpha | chromosome | CDS | 35308 | 279 | - | 0.268817 |
lig | BU067 | DNA ligase (NAD+) | chromosome | CDS | 72432 | 2028 | + | 0.258383 |
mfd | BU294 | transcription-repair coupling factor | chromosome | CDS | 322648 | 2439 | - | 0.246822 |
mutL | BU570 | DNA mismatch repair protein MutL | chromosome | CDS | 602433 | 1755 | - | 0.217094 |
mutS | BU429 | DNA mismatch repair protein | chromosome | CDS | 466372 | 2409 | - | 0.26235 |
mutT | BU202 | mutator MutT protein | chromosome | CDS | 221477 | 375 | + | 0.226667 |
mutY | BU552 | A/G-specific adenine glycosylase | chromosome | CDS | 587804 | 1053 | + | 0.248813 |
nfo | BU137 | endonuclease IV | chromosome | CDS | 143868 | 846 | + | 0.280142 |
nth | BU119 | endonuclease III | chromosome | CDS | 122941 | 633 | + | 0.238547 |
phrB | BU300 | deoxyribodipyrimidine photolyase | chromosome | CDS | 330827 | 1452 | + | 0.258264 |
polA | BU431 | DNA polymerase I | chromosome | CDS | 469696 | 861 | + | 0.218351 |
priA | BU120 | primosomal protein N' | chromosome | CDS | 123596 | 2181 | + | 0.215039 |
recB | BU454 | exodeoxyribonuclease V 135 kDa polypeptide | chromosome | CDS | 497248 | 3525 | + | 0.217021 |
recC | BU453 | exodeoxyribonuclease V 125 kDa polypeptide | chromosome | CDS | 494019 | 3213 | + | 0.209773 |
recD | BU455 | exodeoxyribonuclease V 67 kDa polypeptide | chromosome | CDS | 500778 | 1809 | + | 0.220011 |
rep | BU598 | ATP-dependent DNA helicase Rep | chromosome | CDS | 628113 | 1938 | - | 0.238906 |
rnt | BU188 | ribonuclease T | chromosome | CDS | 203578 | 666 | - | 0.313814 |
sbcB | BU555 | exodeoxyribonuclease I | chromosome | CDS | 590182 | 1242 | - | 0.242351 |
ssb | BU545 | single-strand binding protein | chromosome | CDS | 580878 | 516 | - | 0.313953 |
topA | BU284 | DNA topoisomerase I | chromosome | CDS | 309445 | 2586 | + | 0.276102 |
ung | BU183 | uracil-DNA glycosylase | chromosome | CDS | 199831 | 663 | + | 0.254902 |
yba4 | BU585 | hypothetical protein | chromosome | CDS | 618288 | 339 | - | 0.20649 |
ycfH | BU355 | hypothetical protein | chromosome | CDS | 387632 | 795 | + | 0.257862 |
yhhF | BU023 | hypothetical protein | chromosome | CDS | 22945 | 576 | - | 0.234375 |
yqgF | BU548 | hypothetical protein | chromosome | CDS | 584680 | 408 | + | 0.259804 |