Gene list
Applied filters:
COG category: Transcription
Organism: Yersinia enterocolitica subsp. enterocolitica 8081, 8081
Number of genes found: 286
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| Yersinia enterocolitica subsp. enterocolitica 8081, 8081 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | YE0497 | putative acetyltransferase | chromosome | CDS | 570858 | 504 | - | 0.507937 |
| NA | YE3014 | putative LuxR-family regulatory proteins | chromosome | CDS | 3283919 | 612 | - | 0.367647 |
| NA | YE2632 | hypothetical protein | chromosome | CDS | 2848733 | 1764 | - | 0.315193 |
| NA | YE1743 | putative AraC-family transcriptional regulatory protein | chromosome | CDS | 1939494 | 1107 | + | 0.456188 |
| NA | YE2088 | putative DNA-binding phage-related protein | chromosome | CDS | 2285540 | 324 | - | 0.425926 |
| NA | YE1956 | putative LuxR-family transcriptional regulatory protein | chromosome | CDS | 2135627 | 702 | - | 0.353276 |
| NA | YE3428 | hypothetical protein | chromosome | CDS | 3742839 | 564 | + | 0.478723 |
| NA | YE1190 | putative sugar kinase | chromosome | CDS | 1327796 | 915 | + | 0.526776 |
| NA | YE0826 | putative transcriptional regulatory protein | chromosome | CDS | 952829 | 945 | - | 0.485714 |
| NA | YE2276 | LysR-family transcriptional regulatory protein | chromosome | CDS | 2485170 | 906 | - | 0.549669 |
| NA | YE2675 | DeoR family regulatory protein | chromosome | CDS | 2900763 | 762 | - | 0.368766 |
| NA | YE3589 | LacI family regulatory protein | chromosome | CDS | 3905083 | 1020 | + | 0.496078 |
| NA | YE1102 | putative DNA-binding protein | chromosome | CDS | 1231798 | 339 | + | 0.40708 |
| NA | YE0033 | hypothetical protein | chromosome | CDS | 42914 | 924 | + | 0.482684 |
| NA | YE1753 | AraC-family transcriptional regulatory protein | chromosome | CDS | 1949519 | 387 | - | 0.444444 |
| NA | YE1991 | putative AraC-family transcriptional regulatory protein | chromosome | CDS | 2173084 | 888 | + | 0.423423 |
| NA | YE2670 | putative GntR-family regulatory protein | chromosome | CDS | 2895497 | 1482 | + | 0.387989 |
| NA | YE2017 | putative LuxR-family transcriptional regulatory protein | chromosome | CDS | 2208458 | 720 | + | 0.363889 |
| NA | YE0703 | AraC-family transcriptional regulator | chromosome | CDS | 816140 | 1014 | - | 0.481262 |
| NA | YE2511 | hypothetical protein | chromosome | CDS | 2706166 | 1017 | + | 0.388397 |
| NA | YE0513 | putative acetyltransferase | chromosome | CDS | 584459 | 411 | + | 0.425791 |
| NA | YE1175A | Cro/CI family transcriptional regulator | chromosome | CDS | 1315768 | 408 | - | 0.443627 |
| NA | YE2662 | putative two-component response regulator | chromosome | CDS | 2882443 | 633 | + | 0.399684 |
| NA | YE3478 | hypothetical protein | chromosome | CDS | 3790536 | 294 | - | 0.442177 |
| NA | YE2859 | LysR family transcription regulatory protein | chromosome | CDS | 3109970 | 915 | - | 0.495082 |
| NA | YE3842 | putative transcriptional regulator | chromosome | CDS | 4189423 | 303 | + | 0.442244 |
| NA | YE1233 | hypothetical protein | chromosome | CDS | 1375159 | 432 | - | 0.483796 |
| NA | YE2672 | TetR family transcription regulatory protein | chromosome | CDS | 2897703 | 585 | + | 0.517949 |
| NA | YE1457 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 1636174 | 873 | + | 0.5063 |
| NA | YE1749 | putative acetyltransferase | chromosome | CDS | 1946673 | 420 | + | 0.430952 |
| NA | YE3895 | MerR-family transcriptional regulator | chromosome | CDS | 4255065 | 426 | - | 0.420188 |
| NA | YE1166 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 1305680 | 903 | - | 0.395349 |
| NA | YE3797 | probable lysR-family transcriptional regulatory protein | chromosome | CDS | 4140327 | 912 | + | 0.479167 |
| NA | YE0135 | TetR-family transcriptional regulatory protein | chromosome | CDS | 154470 | 645 | + | 0.530233 |
| NA | YEP0058 | hypothetical protein | pYVe8081 | CDS | 41427 | 243 | - | 0.44856 |
| NA | YE2506 | two-component system, sensor regulator | chromosome | CDS | 2700285 | 720 | + | 0.451389 |
| NA | YE3357 | LacI-family regulatory protein | chromosome | CDS | 3668569 | 1083 | - | 0.460757 |
| NA | YE1437 | putative transcriptional regulatory protein | chromosome | CDS | 1612378 | 744 | + | 0.487903 |
| NA | YE0346 | putative TetR-family regulatory protein | chromosome | CDS | 411687 | 576 | - | 0.480903 |
| NA | YE1713 | hypothetical protein | chromosome | CDS | 1911367 | 912 | + | 0.479167 |
| NA | YE3185 | hypothetical protein | chromosome | CDS | 3462393 | 915 | - | 0.498361 |
| NA | YE3838 | Putative LysR family transcriptional regulator | chromosome | CDS | 4183848 | 927 | + | 0.526429 |
| NA | YE3353 | hypothetical protein | chromosome | CDS | 3665807 | 384 | - | 0.481771 |
| NA | YE1621 | putative LuxR-family regulatory protein | chromosome | CDS | 1826063 | 585 | - | 0.369231 |
| NA | YE4108 | hypothetical protein | chromosome | CDS | 4495212 | 462 | - | 0.435065 |
| NA | YE3791 | putative ribonuclease inhibitor | chromosome | CDS | 4134454 | 267 | - | 0.438202 |
| NA | YE1978 | putative DeoR-family regulatory protein | chromosome | CDS | 2156203 | 747 | - | 0.481928 |
| NA | YE0145 | LysR-family transcriptional regulatory protein | chromosome | CDS | 171355 | 882 | - | 0.470522 |
| NA | YE3694 | putative transcriptional regulator | chromosome | CDS | 4034021 | 459 | - | 0.459695 |
| NA | YE4029 | hypothetical protein | chromosome | CDS | 4389687 | 834 | + | 0.450839 |
| NA | YE1364 | putative LacI-family transcriptional regulatory protein | chromosome | CDS | 1518810 | 993 | + | 0.455186 |
| NA | YE2840 | putative RNA polymerase sigma factor | chromosome | CDS | 3088834 | 555 | + | 0.504505 |
| NA | YE3263 | hypothetical protein | chromosome | CDS | 3561453 | 261 | + | 0.471264 |
| NA | YE2656 | GerR-family transcriptional regulatory protein | chromosome | CDS | 2873490 | 630 | + | 0.503175 |
| NA | YE0014 | putative GntR-famly transcriptional regulator | chromosome | CDS | 16237 | 690 | - | 0.463768 |
| NA | YE1577 | hypothetical protein | chromosome | CDS | 1778166 | 543 | - | 0.499079 |
| NA | YE3720 | lysR-family transcriptional regulatory protein | chromosome | CDS | 4062156 | 897 | - | 0.545151 |
| NA | YE3194 | acetyltransferase (GNAT) family protein | chromosome | CDS | 3471834 | 495 | + | 0.426263 |
| NA | YE2820 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 3064831 | 870 | + | 0.534483 |
| NA | YE0935 | AraC-family transcriptional regulator | chromosome | CDS | 1062927 | 1008 | + | 0.470238 |
| NA | YE1409 | putative prophage repressor protein | chromosome | CDS | 1581739 | 723 | - | 0.438451 |
| NA | YE3962 | LacI-family transcriptional regulator | chromosome | CDS | 4304384 | 981 | + | 0.513761 |
| NA | YE0975A | hypothetical protein | chromosome | CDS | 1098498 | 201 | + | 0.447761 |
| NA | YE3876 | Putative IclR family transcriptional regulator | chromosome | CDS | 4230215 | 840 | + | 0.522619 |
| NA | YE3688 | RpiR family regulatory protein | chromosome | CDS | 4026155 | 861 | - | 0.413473 |
| NA | YE4186 | Probable two-component response regulator | chromosome | CDS | 4587397 | 552 | + | 0.496377 |
| NA | YE1942 | putative DNA-binding protein | chromosome | CDS | 2122243 | 483 | - | 0.480331 |
| NA | YE1331 | LacI-family transcriptional regulatory protein | chromosome | CDS | 1481241 | 1026 | + | 0.463938 |
| NA | YE2051 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 2241111 | 948 | + | 0.462025 |
| NA | YE2034 | putative LuxR-family transcriptional regulatory protein | chromosome | CDS | 2224042 | 711 | + | 0.374121 |
| NA | YE1251 | putative regulatory protein | chromosome | CDS | 1394764 | 795 | - | 0.374843 |
| NA | YE3335 | LysR-family transcriptional regulatory protein | chromosome | CDS | 3647794 | 897 | - | 0.488294 |
| NA | YE1306 | putative AraC-family regulatory protein | chromosome | CDS | 1452386 | 786 | + | 0.491094 |
| NA | YE2890 | TetR family transcription regulatory protein | chromosome | CDS | 3142308 | 708 | + | 0.485876 |
| NA | YE0849 | two-component system response regulator | chromosome | CDS | 976157 | 717 | - | 0.446304 |
| NA | YE1259 | hypothetical protein | chromosome | CDS | 1403195 | 660 | - | 0.471212 |
| NA | YE2050 | putative LuxR-family transcriptional regulatory protein | chromosome | CDS | 2240179 | 714 | - | 0.292717 |
| NA | YE2253 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 2461446 | 861 | - | 0.332172 |
| NA | YE3724 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 4066304 | 894 | + | 0.512304 |
| NA | YE2132 | LysR-family transcriptional regulatory protein | chromosome | CDS | 2333007 | 885 | - | 0.502825 |
| NA | YE0324 | putative ATP/GTP-binding protein | chromosome | CDS | 388865 | 1509 | + | 0.501657 |
| NA | YE4107 | putative transcriptional regulator | chromosome | CDS | 4494216 | 963 | + | 0.468328 |
| NA | YE1056 | hypothetical protein | chromosome | CDS | 1177987 | 495 | + | 0.507071 |
| NA | YE0483 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 560118 | 909 | - | 0.506051 |
| NA | YE4157 | hypothetical protein | chromosome | CDS | 4552603 | 645 | - | 0.528682 |
| NA | YE4144 | Putative transcriptional regulator | chromosome | CDS | 4535328 | 1482 | - | 0.544534 |
| NA | YE4037 | Putative LysR family transcriptional regulator | chromosome | CDS | 4399544 | 921 | - | 0.434311 |
| NA | YE0197 | putative TetR-family regulatory protein | chromosome | CDS | 233186 | 573 | - | 0.483421 |
| NA | YE1026 | LuxR-family transcriptional regulator | chromosome | CDS | 1144382 | 723 | - | 0.334716 |
| NA | YE0559 | LysR-family regulatory protein | chromosome | CDS | 644247 | 1089 | - | 0.483012 |
| NA | YE2022 | probable LysR-family transcriptional regulator | chromosome | CDS | 2213472 | 912 | + | 0.5 |
| NA | YE1192 | putative rpiR-family transcriptional regulatory protein | chromosome | CDS | 1329398 | 879 | + | 0.488055 |
| NA | YE2474 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 2663341 | 957 | - | 0.451411 |
| NA | YE0036 | LuxR family transcription regulatory protein | chromosome | CDS | 45147 | 687 | + | 0.366812 |
| NA | YE1201 | putative two-component system response regulator | chromosome | CDS | 1340722 | 684 | + | 0.5 |
| NA | YE0914 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 1041897 | 903 | - | 0.460687 |
| NA | YE1415 | putative LacI-family regulatory protein | chromosome | CDS | 1585808 | 741 | + | 0.364372 |
| NA | YE0582 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 667345 | 912 | + | 0.531798 |
| NA | YE0038 | LuxR family transcription regulatory protein | chromosome | CDS | 46579 | 687 | + | 0.347889 |
| NA | YE1970 | putative DNA-binding protein | chromosome | CDS | 2150571 | 462 | - | 0.54329 |
| NA | YE0037 | LuxR family transcription regulatory protein | chromosome | CDS | 45863 | 687 | + | 0.352256 |
| NA | YE4106 | Hypothetical ROK family protein | chromosome | CDS | 4493211 | 903 | + | 0.438538 |
| NA | YE1739 | hypothetical protein | chromosome | CDS | 1937261 | 342 | + | 0.473684 |
| NA | YE0343 | putative lysr-family transcriptional regulatory protein | chromosome | CDS | 408604 | 894 | + | 0.501119 |
| NA | YE3649 | AraC-family regulatory protein | chromosome | CDS | 3976641 | 894 | - | 0.47651 |
| NA | YE0807 | putative transcriptional regulatory protein | chromosome | CDS | 931780 | 591 | + | 0.49577 |
| NA | YE1227 | putative two-component system response-regulator | chromosome | CDS | 1368049 | 741 | - | 0.415655 |
| NA | YE1223 | putative lysR-family transcriptional regulatory protein | chromosome | CDS | 1363702 | 888 | - | 0.522523 |
| NA | YE0311 | putative two-component response regulator | chromosome | CDS | 369338 | 633 | - | 0.43128 |
| NA | YE1958 | putative LuxR-family transcriptional regulatory protein | chromosome | CDS | 2137909 | 765 | + | 0.352941 |
| NA | YE2470 | putative GntR-family regulatory protein | chromosome | CDS | 2657213 | 1434 | - | 0.514644 |
| NA | YE1087 | putative acetyltransferase | chromosome | CDS | 1219265 | 441 | - | 0.45805 |
| NA | YE3200 | GntR family transcription regulatory protein | chromosome | CDS | 3485925 | 711 | + | 0.389592 |
| NA | YE2245 | hypothetical protein | chromosome | CDS | 2457914 | 411 | + | 0.40146 |
| NA | YE0383 | hypothetical protein | chromosome | CDS | 452266 | 426 | + | 0.455399 |
| NA | YE3423 | ArsR-family transcriptional regulator | chromosome | CDS | 3738999 | 306 | - | 0.486928 |
| NA | YE3340 | possible reguatory protein | chromosome | CDS | 3652607 | 660 | - | 0.304545 |
| NA | YE2053 | putative transcriptional regulatory protein | chromosome | CDS | 2243670 | 996 | + | 0.52008 |
| NA | YE3033 | LysR family transcription regulatory protein | chromosome | CDS | 3302712 | 912 | + | 0.497807 |
| NA | YE0277 | putative acetyltransferase | chromosome | CDS | 322902 | 552 | - | 0.449275 |
| NA | YE0312 | putative AraC-family regulatory protein | chromosome | CDS | 370458 | 621 | + | 0.388084 |
| NA | YE0316 | putative DNA-binding protein | chromosome | CDS | 373868 | 543 | + | 0.513812 |
| NA | YE2048 | LysR-family transcriptional regulatory protein | chromosome | CDS | 2236516 | 867 | + | 0.493656 |
| NA | YE1835 | putative DNA-binding protein | chromosome | CDS | 2019471 | 420 | - | 0.414286 |
| NA | YE1951 | putative TetR-family transcriptional regulatory protein | chromosome | CDS | 2130561 | 669 | + | 0.508221 |
| NA | YE2151 | TetR-family transcriptional regulatory protein | chromosome | CDS | 2351671 | 603 | + | 0.495854 |
| NA | YE0039 | LuxR family transcription regulatory protein | chromosome | CDS | 47294 | 687 | + | 0.356623 |
| NA | YE0809 | putative ArsR-family transcriptional regulatory protein | chromosome | CDS | 935067 | 348 | + | 0.522988 |
| NA | YE3361 | putative AsnC-family transcriptional regulator | chromosome | CDS | 3674381 | 471 | + | 0.4862 |
| NA | YE2527 | putative AraC-family transcriptional regulatory protein | chromosome | CDS | 2722716 | 870 | + | 0.44023 |
| NA | YE3496A | putative DNA-binding protein | chromosome | CDS | 3807520 | 357 | + | 0.380952 |
| NA | YE4125 | Putative transcriptional regulator | chromosome | CDS | 4514862 | 927 | + | 0.535059 |
| NA | YE3123 | probable AsnC-family regulatory protein | chromosome | CDS | 3396639 | 462 | - | 0.465368 |
| NA | YE0815 | transcriptional regulatory protein | chromosome | CDS | 939583 | 960 | - | 0.43125 |
| NA | YE2510 | hypothetical protein | chromosome | CDS | 2705622 | 252 | - | 0.416667 |
| NA | YE0529 | putative transcriptional regulatory protein | chromosome | CDS | 598407 | 978 | + | 0.486708 |
| NA | YE4153 | putative acetyltransferase | chromosome | CDS | 4547355 | 456 | + | 0.5 |
| NA | YE0931 | putative GntR-family transcriptional regulatory protein | chromosome | CDS | 1058810 | 1455 | + | 0.520275 |
| NA | YE4129 | hypothetical protein | chromosome | CDS | 4519545 | 312 | - | 0.442308 |
| NA | YE1165 | putative LuxR-family transcriptional regulatory protein | chromosome | CDS | 1304987 | 687 | + | 0.30131 |
| NA | YE2519 | RNA polymerase sigma factor for flagellar operon | chromosome | CDS | 2713994 | 723 | - | 0.529737 |
| NA | YE4024 | hypothetical protein | chromosome | CDS | 4382381 | 501 | + | 0.453094 |
| NA | YE4033 | Putative transcriptional regulator of the LysR family | chromosome | CDS | 4394855 | 954 | + | 0.48218 |
| NA | YE2504 | probable deoR-family transcriptional regulatory protein | chromosome | CDS | 2697592 | 780 | + | 0.49359 |
| NA | YE3578 | response regulator protein | chromosome | CDS | 3893711 | 705 | + | 0.415603 |
| NA | YE3162 | hypothetical protein | chromosome | CDS | 3434730 | 450 | - | 0.495556 |
| NA | YE1245 | putative TetR-family regulatory protein | chromosome | CDS | 1388642 | 591 | - | 0.49577 |
| NA | YE2159 | LysR-family transcriptional regulatory protein | chromosome | CDS | 2359173 | 939 | - | 0.514377 |
| NA | YE1303 | hypothetical protein | chromosome | CDS | 1448640 | 1482 | - | 0.512146 |
| NA | YE1295 | putative LacI-family transcriptional regulatory protein | chromosome | CDS | 1439678 | 957 | + | 0.446186 |
| NA | YE3355 | hypothetical protein | chromosome | CDS | 3667114 | 306 | - | 0.460784 |
| NA | YE2488 | putative Lys-family transcriptional regulatory protein | chromosome | CDS | 2680409 | 933 | + | 0.491961 |
| NA | YEP0061 | putative plasmid partitioning control protein | pYVe8081 | CDS | 42931 | 963 | - | 0.417445 |
| NA | YE1863 | putative LysR-family transcriptional regulatory protein | chromosome | CDS | 2042930 | 921 | + | 0.535288 |
| NA | YE2597 | AsnC-family transcriptional regulatory protein | chromosome | CDS | 2795126 | 459 | + | 0.448802 |
| NA | YE2040 | probable leucine-responsive regulatory protein | chromosome | CDS | 2231499 | 456 | + | 0.524123 |
| NA | YE4118 | putative AraC-family transcriptional regulator | chromosome | CDS | 4504402 | 1194 | - | 0.490787 |
| CI | YE0854 | bacteriophage CI repressor protein | chromosome | CDS | 982385 | 300 | - | 0.42 |
| aceC | YE0698 | pyruvate dehydrogenase complex repressor | chromosome | CDS | 808535 | 765 | + | 0.520261 |
| acrR | YE3099 | putative tetR-family transcriptional regulatory protein | chromosome | CDS | 3372244 | 657 | - | 0.435312 |
| agaR | YE2448 | DeoR-family regulatory protein | chromosome | CDS | 2636942 | 810 | - | 0.453086 |
| alsB | YE1524 | leucine-responsive regulatory protein | chromosome | CDS | 1705062 | 495 | + | 0.444444 |
| alt | YE3684 | RNA polymerase sigma factor RpoD | chromosome | CDS | 4019198 | 1839 | + | 0.494834 |
| ampR | YE2441 | transcriptional activator protein | chromosome | CDS | 2631677 | 885 | + | 0.492655 |
| antO | YE0612 | transcriptional activator protein NhaR | chromosome | CDS | 704895 | 900 | + | 0.432222 |
| appR | YE0775 | RNA polymerase sigma factor RpoS | chromosome | CDS | 897556 | 999 | + | 0.464464 |
| araC | YE2006 | arabinose operon regulatory protein | chromosome | CDS | 2193899 | 933 | + | 0.500536 |
| arcA | YE0595 | aerobic respiration control protein | chromosome | CDS | 683089 | 717 | - | 0.493724 |
| arsR | YE3366 | arsenical resistance operon repressor | chromosome | CDS | 3679048 | 351 | - | 0.521368 |
| arsR2 | YE3472 | arsenical resistance operon repressor | chromosome | CDS | 3783946 | 354 | + | 0.471751 |
| ascG | YE1255 | putative regulatory protein | chromosome | CDS | 1398513 | 1032 | - | 0.41376 |
| asnC | YE0002 | regulatory protein | chromosome | CDS | 802 | 462 | - | 0.417749 |
| b4043 | YE3855 | LexA repressor | chromosome | CDS | 4204644 | 609 | - | 0.487685 |
| baeR | YE1104 | two-component system response regulator | chromosome | CDS | 1232632 | 720 | - | 0.509722 |
| basR | YE0423 | two-component system response regulator | chromosome | CDS | 491725 | 660 | - | 0.509091 |
| blrA | YE3384 | putative response regulator | chromosome | CDS | 3696294 | 699 | - | 0.515021 |
| budR | YE4015 | Putative transcriptional regulator | chromosome | CDS | 4371963 | 897 | - | 0.48495 |
| cI | YE1691 | phage repressor protein | chromosome | CDS | 1885885 | 300 | + | 0.476667 |
| celD | YE0971 | cel operon repressor | chromosome | CDS | 1093621 | 831 | + | 0.387485 |
| citB | YE2655 | response regulator protein | chromosome | CDS | 2872602 | 687 | + | 0.465793 |
| copR | YE3024 | transcriptional activator | chromosome | CDS | 3296382 | 690 | + | 0.515942 |
| cpxR | YE0086 | two component system response regulatory protein | chromosome | CDS | 95429 | 699 | - | 0.482117 |
| cra | YE0661 | putative fructose repressor | chromosome | CDS | 764279 | 1005 | + | 0.519403 |
| crgA | YE3659 | LysR-family regulatory protein | chromosome | CDS | 3991110 | 918 | - | 0.527233 |
| csdA | YE0440 | cold-shock dead-box protein A | chromosome | CDS | 511217 | 1974 | + | 0.515198 |
| cspA1 | YE3821 | major cold shock protein CspA1 | chromosome | CDS | 4167654 | 213 | + | 0.431925 |
| cspA2 | YE3823 | major cold shock protein | chromosome | CDS | 4168613 | 213 | + | 0.403756 |
| cspA3 | YE3822 | major cold shock protein CspA1 | chromosome | CDS | 4168133 | 213 | + | 0.431925 |
| cspB | YE1547 | cold shock-like protein cspE3 | chromosome | CDS | 1738217 | 210 | + | 0.461905 |
| cspB | YE0940 | cold shock-like protein cspG | chromosome | CDS | 1066253 | 213 | + | 0.413146 |
| cspC1 | YE1765 | cold shock-like protein cspC1 | chromosome | CDS | 1956541 | 210 | + | 0.461905 |
| cspC2 | YE2590 | cold shock-like protein CspC2 | chromosome | CDS | 2786778 | 213 | - | 0.455399 |
| cspD | YE1516 | cold shock-like protein | chromosome | CDS | 1694613 | 258 | - | 0.484496 |
| cspE1 | YE3012 | cold shock-like protein cspE1 | chromosome | CDS | 3282778 | 210 | - | 0.438095 |
| cspE2 | YE1546 | putative cold shock protein CspE2 | chromosome | CDS | 1737791 | 210 | + | 0.47619 |
| cysB | YE2198 | cys regulon transcriptional activator | chromosome | CDS | 2407702 | 975 | - | 0.478974 |
| cytR | YE0107 | transcriptional repressor | chromosome | CDS | 116363 | 1029 | - | 0.485909 |
| dbpA | YE1785 | ATP-dependent RNA helicase | chromosome | CDS | 1979790 | 1383 | + | 0.517715 |
| deoR | YE1474 | deoxyribose operon repressor | chromosome | CDS | 1657474 | 765 | - | 0.437909 |
| emrR | YE3240 | MarR-family transcriptional regulatory protein | chromosome | CDS | 3533001 | 513 | + | 0.479532 |
| exuR | YE3710 | exu regulon transcriptional regulator | chromosome | CDS | 4055612 | 795 | + | 0.486792 |
| fadR | YE2283 | fatty acid metabolism regulatory protein | chromosome | CDS | 2496336 | 720 | - | 0.4875 |
| fam | YE0228 | RNA polymerase sigma-32 factor | chromosome | CDS | 264131 | 858 | + | 0.483683 |
| fiS | YE3817 | DNA-binding protein Fis | chromosome | CDS | 4164615 | 297 | + | 0.464646 |
| flgM | YE2562 | negative regulator of flagellin synthesis | chromosome | CDS | 2754540 | 258 | + | 0.484496 |
| galR | YE3331 | galactose operon repressor | chromosome | CDS | 3642679 | 1071 | + | 0.495798 |
| galS | YE2816 | mgl repressor and galactose ultrainduction factor | chromosome | CDS | 3060265 | 1038 | - | 0.508671 |
| gcvA | YE3300 | glycine cleavage system transcriptional activator | chromosome | CDS | 3601709 | 918 | - | 0.492375 |
| glnF | YE3759 | RNA polymerase sigma-54 factor | chromosome | CDS | 4102315 | 1434 | + | 0.488145 |
| glpR | YE3987 | glycerol-3-phosphate repressor protein | chromosome | CDS | 4334717 | 759 | - | 0.500659 |
| gntR | YE4022 | gluconate utilization system Gnt-I transcriptional repressor | chromosome | CDS | 4380011 | 996 | - | 0.495984 |
| greA | YE0425 | transcription elongation factor | chromosome | CDS | 494097 | 477 | + | 0.421384 |
| greB | YE4003 | transcription elongation factor | chromosome | CDS | 4355133 | 498 | + | 0.508032 |
| groN | YE0286 | DNA-directed RNA polymerase beta chain | chromosome | CDS | 329960 | 4029 | + | 0.497642 |
| gutR | YE1093 | putative glucitol operon repressor | chromosome | CDS | 1223538 | 771 | - | 0.452659 |
| hepA | YE0636 | RNA polymerase associated helicase | chromosome | CDS | 730023 | 2907 | - | 0.511868 |
| hexA | YE1343 | LysR-family transcriptional regulatory protein | chromosome | CDS | 1495357 | 933 | + | 0.473741 |
| hexR | YE2384 | hex regulon repressor | chromosome | CDS | 2571700 | 870 | + | 0.46092 |
| hlyT | YE0264 | putative regulatory protein | chromosome | CDS | 302881 | 489 | - | 0.427403 |
| horYe | YE2144 | MarR-family transcriptional regulatory protein | chromosome | CDS | 2344589 | 432 | - | 0.43287 |
| hutC | YE2460 | putative GntR-family transcriptional regulatory protein | chromosome | CDS | 2645484 | 768 | + | 0.485677 |
| hyfR | YE2811 | putative hydrogenlyase transcriptional activator | chromosome | CDS | 3052602 | 2160 | - | 0.450463 |
| hypB | YE3603 | hydrogenase isoenzymes nickel incorporation protein | chromosome | CDS | 3926454 | 1101 | - | 0.522253 |
| iciA | YE3402 | chromosome initiation inhibitor | chromosome | CDS | 3715398 | 894 | + | 0.527964 |
| ilvY | YE0154 | LysR-family transcriptional regulatory protein | chromosome | CDS | 182937 | 882 | - | 0.521542 |
| kdgR | YE1877 | IclR-family transcriptional regulatory protein | chromosome | CDS | 2059155 | 792 | + | 0.440657 |
| kdpE | YE2964 | two-component regulatory protein response regulator KdpE | chromosome | CDS | 3226714 | 528 | + | 0.501894 |
| kmt | YE4004 | transcriptional regulatory protein | chromosome | CDS | 4355751 | 720 | + | 0.522222 |
| lacI | YE2591 | lactose operon repressor | chromosome | CDS | 2787472 | 1035 | + | 0.48599 |
| leuO | YE0655 | LysR-family transcriptional regulator LeuO | chromosome | CDS | 758158 | 957 | + | 0.39185 |
| lysR | YE3333 | transcriptional activator protein LysR | chromosome | CDS | 3645197 | 954 | + | 0.477987 |
| malI | YE2012 | maltose regulon regulatory protein | chromosome | CDS | 2201822 | 1032 | + | 0.522287 |
| malT | YE3990 | maltose regulon positive regulatory protein | chromosome | CDS | 4336909 | 2712 | - | 0.504425 |
| metJ | YE0110 | transcriptional repressor protein | chromosome | CDS | 120521 | 318 | - | 0.490566 |
| metR | YE0248 | lysR-family transcriptional regulatory protein | chromosome | CDS | 284492 | 954 | - | 0.525157 |
| mfd | YE1709 | transcription-repair coupling factor | chromosome | CDS | 1904376 | 3447 | - | 0.51378 |
| mlc | YE2023 | putative ROK family transcriptional regulatory protein | chromosome | CDS | 2214604 | 1218 | + | 0.475369 |
| mmrA | YE0166 | putative DEAD-box helicase | chromosome | CDS | 198907 | 1077 | - | 0.480966 |
| myfE | YE1450 | putative regulatory protein | chromosome | CDS | 1628085 | 666 | + | 0.393393 |
| nagC | YE2981 | putative N-acetylglucosamine regulatory protein | chromosome | CDS | 3248478 | 1224 | + | 0.485294 |
| nitA | YE0168 | transcription termination factor | chromosome | CDS | 201295 | 1260 | + | 0.474603 |
| nlp | YE1026A | putative DNA-binding protein | chromosome | CDS | 1145384 | 273 | + | 0.40293 |
| nusA | YE0433 | N utilization substance protein A | chromosome | CDS | 501594 | 1488 | + | 0.5 |
| nusB | YE3159 | N utilization substance protein B | chromosome | CDS | 3432509 | 417 | - | 0.501199 |
| nusG | YE0280 | transcription antitermination protein | chromosome | CDS | 326426 | 546 | + | 0.483516 |
| oxyR | YE0133 | oxidative stress transcriptional regulatory protein | chromosome | CDS | 151949 | 933 | + | 0.49089 |
| phnF | YE0478 | probable gntR-family transcriptional regulatory protein | chromosome | CDS | 552658 | 726 | - | 0.5427 |
| phoB | YE3182 | phosphate regulon transcriptional regulatory protein | chromosome | CDS | 3456220 | 690 | - | 0.488406 |
| pocR | YE2726 | pdu and cob operons regulatory protein | chromosome | CDS | 2962484 | 903 | - | 0.462901 |
| pspC | YE2119 | phage shock protein C | chromosome | CDS | 2321309 | 351 | - | 0.504274 |
| pspF | YE2122 | psp operon transcriptional activator | chromosome | CDS | 2322972 | 1020 | + | 0.509804 |
| purR | YE2158 | purine nucleotide synthesis repressor | chromosome | CDS | 2358092 | 1026 | + | 0.478557 |
| rbaB | YE1007 | ATP-dependent RNA helicase | chromosome | CDS | 1126359 | 1326 | - | 0.502262 |
| rbsR | YE0012A | ribose operon repressor | chromosome | CDS | 13740 | 1002 | + | 0.486028 |
| rcsB | YE1397 | probable two component response regulator component B | chromosome | CDS | 1565655 | 648 | - | 0.407407 |
| recG | YE0043 | ATP-dependent DNA helicase | chromosome | CDS | 52840 | 2082 | - | 0.509606 |
| relA | YE0744 | GTP pyrophosphokinase | chromosome | CDS | 867592 | 2235 | + | 0.510067 |
| rhlE | YE2889 | putative ATP-dependent RNA helicase | chromosome | CDS | 3140549 | 1356 | - | 0.527286 |
| rnb | YE1982 | exoribonuclease II | chromosome | CDS | 2160853 | 1935 | - | 0.514212 |
| rnc | YE1017 | ribonuclease III | chromosome | CDS | 1137463 | 681 | + | 0.487518 |
| rnk | YE3787 | regulator of nucleoside diphosphate kinase | chromosome | CDS | 4131213 | 411 | + | 0.523114 |
| rnr | YE0384 | ribonuclease R | chromosome | CDS | 452871 | 2547 | + | 0.524539 |
| rob | YE0593 | putative right origin-binding protein | chromosome | CDS | 681449 | 867 | - | 0.487889 |
| rpoA | YE3898 | DNA-directed RNA polymerase alpha chain | chromosome | CDS | 4256465 | 993 | - | 0.509567 |
| rpoC | YE0287 | DNA-directed RNA polymerase beta' chain | chromosome | CDS | 334125 | 4221 | + | 0.514096 |
| rpoE | YE1010 | RNA polymerase sigma E factor | chromosome | CDS | 1130517 | 576 | + | 0.454861 |
| rpoZ | YE0046 | DNA-directed RNA polymerase, omega chain | chromosome | CDS | 57741 | 276 | - | 0.485507 |
| rsd | YE0295 | regulator of sigma D | chromosome | CDS | 345825 | 504 | - | 0.440476 |
| rstA | YE2083 | two-component regulatory system, response regulator protein | chromosome | CDS | 2280015 | 729 | + | 0.481481 |
| scrR | YE0550A | sucrose operon repressor | chromosome | CDS | 630932 | 1035 | - | 0.510145 |
| spoT | YE0045 | guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase | chromosome | CDS | 55620 | 2103 | - | 0.490252 |
| treR | YE3775 | trehalose operon repressor | chromosome | CDS | 4117357 | 948 | - | 0.503165 |
| trpR | YE0590 | putative trp operon repressor | chromosome | CDS | 679880 | 333 | + | 0.486486 |
| ttk | YE0060 | TetR-family regulatory protein | chromosome | CDS | 70864 | 597 | - | 0.482412 |
| ttrR | YE1613 | tetrathionate reductase complex: two-component system response regulator | chromosome | CDS | 1815509 | 504 | - | 0.511905 |
| tyrR | YE2114 | transcriptional regulatory protein | chromosome | CDS | 2315717 | 1578 | - | 0.485425 |
| uhpA | YE4089 | two-component system response regulator | chromosome | CDS | 4472774 | 591 | - | 0.494078 |
| umuD | YE1733 | putative uv protection and mutation protein | chromosome | CDS | 1933283 | 414 | - | 0.451691 |
| ureG | YE0956 | urease accessory protein | chromosome | CDS | 1080067 | 606 | + | 0.508251 |
| uvrY | YE1831 | response regulator protein | chromosome | CDS | 2016322 | 657 | - | 0.449011 |
| virF | YEP0035 | virulence regulon transcriptional activator | pYVe8081 | CDS | 26450 | 816 | + | 0.410539 |
| ybtA | YE2616 | transcriptional regulator YbtA | chromosome | CDS | 2819095 | 960 | + | 0.55625 |
| yenR | YE1599 | quorum-sensing transcriptional activator | chromosome | CDS | 1798138 | 735 | + | 0.341497 |
| yhhK | YE0229 | putative acetyltransferase | chromosome | CDS | 265084 | 393 | - | 0.473282 |
| ysaE | YE3549 | AraC family regulatory protein | chromosome | CDS | 3866989 | 681 | - | 0.409692 |
| ysrR | YE3560 | response regulator protein | chromosome | CDS | 3873905 | 711 | + | 0.447257 |
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