Gene list
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COG category: Transcription
Organism: Escherichia coli UTI89, UTI89
Number of genes found: 302
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli UTI89, UTI89 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | UTI89_C0317 | putative LysR-like transcriptional regulator | chromosome | CDS | 326637 | 990 | + | 0.425253 |
NA | UTI89_C5103 | hypothetical protein | chromosome | CDS | 4999989 | 327 | + | 0.550459 |
NA | UTI89_C4402 | hypothetical protein | chromosome | CDS | 4287781 | 906 | - | 0.462472 |
NA | UTI89_C2677 | repressor protein | chromosome | CDS | 2629985 | 651 | + | 0.470046 |
NA | UTI89_C4931 | putative response regulator | chromosome | CDS | 4831580 | 723 | + | 0.466113 |
NA | UTI89_C1600 | hypothetical transcriptional regulator YcjZ | chromosome | CDS | 1511911 | 900 | + | 0.47 |
NA | UTI89_C4862 | hypothetical protein | chromosome | CDS | 4760658 | 522 | - | 0.507663 |
NA | UTI89_C0965 | bacteriophage WPhi putative phage protein C | chromosome | CDS | 946985 | 342 | + | 0.453216 |
NA | UTI89_C4957 | hypothetical protein | chromosome | CDS | 4864027 | 951 | + | 0.483701 |
NA | UTI89_C4973 | hypothetical protein | chromosome | CDS | 4877615 | 819 | - | 0.466422 |
NA | UTI89_C0336 | hypothetical protein | chromosome | CDS | 348768 | 705 | - | 0.485106 |
NA | UTI89_C1562 | putative transcriptional repressor | chromosome | CDS | 1472347 | 666 | + | 0.459459 |
NA | UTI89_C2898 | ATP-dependent RNA helicase | chromosome | CDS | 2854638 | 1335 | + | 0.544569 |
NA | UTI89_C4911 | UidR transriptional regulator | chromosome | CDS | 4809697 | 840 | + | 0.483333 |
NA | UTI89_C4475 | hypothetical protein | chromosome | CDS | 4359388 | 291 | + | 0.487972 |
NA | UTI89_C3697 | hypothetical protein | chromosome | CDS | 3623441 | 831 | + | 0.483755 |
NA | UTI89_C1713 | putative ARAC-type regulatory protein | chromosome | CDS | 1642544 | 762 | - | 0.392388 |
NA | UTI89_C3951 | hypothetical protein | chromosome | CDS | 3843169 | 489 | + | 0.513292 |
NA | UTI89_C1757 | hypothetical protein | chromosome | CDS | 1682456 | 699 | + | 0.409156 |
NA | UTI89_C4202 | hypothetical protein YajF | chromosome | CDS | 4091268 | 966 | - | 0.531056 |
NA | UTI89_C2363 | hypothetical protein | chromosome | CDS | 2311793 | 780 | - | 0.466667 |
NA | UTI89_C2997 | hypothetical protein | chromosome | CDS | 2931364 | 327 | - | 0.550459 |
NA | UTI89_C5163 | hypothetical protein | chromosome | CDS | 5052667 | 285 | + | 0.431579 |
NA | UTI89_C4589 | putative transcriptional regulator of sorbose uptake and utilization genes | chromosome | CDS | 4481737 | 1032 | - | 0.492248 |
NA | UTI89_C2182 | putative AraC type regulator | chromosome | CDS | 2077856 | 960 | + | 0.565625 |
NA | UTI89_C1608 | hypothetical protein | chromosome | CDS | 1519489 | 816 | - | 0.457108 |
NA | UTI89_C0292 | putative transcription regulator | chromosome | CDS | 303574 | 465 | + | 0.509677 |
NA | UTI89_C1093 | possible prophage regulatory protein | chromosome | CDS | 1085457 | 297 | + | 0.447811 |
NA | UTI89_C3999 | putative regulator | chromosome | CDS | 3885668 | 756 | + | 0.436508 |
NA | UTI89_C4814 | hypothetical protein | chromosome | CDS | 4708922 | 720 | + | 0.409722 |
NA | UTI89_C0297 | hypothetical protein | chromosome | CDS | 306702 | 525 | - | 0.304762 |
NA | UTI89_C3030 | hypothetical protein | chromosome | CDS | 2955390 | 1335 | - | 0.525094 |
NA | UTI89_C4401 | hypothetical protein | chromosome | CDS | 4286735 | 846 | - | 0.408983 |
NA | UTI89_C5096 | hypothetical protein | chromosome | CDS | 4995860 | 261 | + | 0.455939 |
NA | UTI89_C1556 | putative DEOR-type transcriptional regulator | chromosome | CDS | 1464527 | 750 | - | 0.489333 |
NA | UTI89_C4417 | putative transcriptional regulator | chromosome | CDS | 4302776 | 855 | - | 0.525146 |
NA | UTI89_C4624 | putative regulator | chromosome | CDS | 4517804 | 1062 | + | 0.502825 |
NA | UTI89_C3436 | putative regulator | chromosome | CDS | 3371990 | 750 | + | 0.444 |
NA | UTI89_C4952 | hypothetical protein | chromosome | CDS | 4858346 | 234 | - | 0.512821 |
NA | UTI89_C3652 | hypothetical protein YhcI | chromosome | CDS | 3580823 | 909 | - | 0.578658 |
NA | UTI89_C4853 | hypothetical protein | chromosome | CDS | 4752469 | 555 | - | 0.412613 |
NA | UTI89_C2104 | hypothetical protein | chromosome | CDS | 2011267 | 273 | + | 0.498168 |
NA | UTI89_C1292 | putative exclusion protein Ren of prophage | chromosome | CDS | 1253333 | 291 | + | 0.501718 |
NA | UTI89_C4653 | putative transcriptional regulator | chromosome | CDS | 4550437 | 885 | - | 0.500565 |
NA | UTI89_C4974 | hypothetical protein | chromosome | CDS | 4878456 | 579 | - | 0.507772 |
NA | UTI89_C1734 | phage hypothetical protein | chromosome | CDS | 1660335 | 423 | + | 0.423168 |
NA | UTI89_C0227 | putative transcriptional regulator LYSR-type | chromosome | CDS | 234715 | 915 | - | 0.49071 |
NA | UTI89_C0683 | putative transcriptional regulator | chromosome | CDS | 688836 | 762 | + | 0.505249 |
NA | UTI89_C2249 | hypothetical protein | chromosome | CDS | 2191307 | 402 | - | 0.527363 |
acrR | UTI89_C0491 | acrAB operon repressor | chromosome | CDS | 499892 | 648 | + | 0.45679 |
adiY | UTI89_C4710 | AdiY transcriptional regulatory protein | chromosome | CDS | 4610910 | 762 | - | 0.41601 |
arcA | UTI89_C5174 | ArcA transcriptional dual regulator | chromosome | CDS | 5063679 | 717 | - | 0.509066 |
argR | UTI89_C3668 | arginine repressor | chromosome | CDS | 3594370 | 471 | + | 0.47983 |
ascG | UTI89_C3076 | ascBF operon repressor | chromosome | CDS | 2996744 | 1053 | - | 0.524217 |
asnC | UTI89_C4298 | regulator for asnA, asnC and GidA | chromosome | CDS | 4187413 | 459 | - | 0.492375 |
baeR | UTI89_C2354 | transcriptional response regulatory protein BaeR | chromosome | CDS | 2301656 | 723 | + | 0.540802 |
basR | UTI89_C4707 | transcriptional regulatory protein basR/PmrA | chromosome | CDS | 4607024 | 669 | - | 0.538117 |
betI | UTI89_C0342 | regulatory protein BetI | chromosome | CDS | 354713 | 606 | - | 0.557756 |
cadC | UTI89_C4730 | transcriptional activator CadC | chromosome | CDS | 4632508 | 1539 | - | 0.422352 |
cbl | UTI89_C2201 | transcriptional activator cbl | chromosome | CDS | 2111628 | 951 | - | 0.483701 |
cdaR | UTI89_C0178 | carbohydrate diacid regulator | chromosome | CDS | 188307 | 1131 | + | 0.531388 |
celD | UTI89_C1928 | CelD transcriptional regulator | chromosome | CDS | 1852067 | 843 | - | 0.412811 |
cobB | UTI89_C1248 | CobB protein | chromosome | CDS | 1224500 | 822 | + | 0.508516 |
cpxR | UTI89_C4496 | transcriptional regulatory protein CpxR | chromosome | CDS | 4381934 | 699 | - | 0.51073 |
creB | UTI89_C5171 | transcriptional regulatory protein CreB | chromosome | CDS | 5060096 | 690 | + | 0.544928 |
csgD | UTI89_C1161 | putative 2-component transcriptional regulator for 2nd curli operon | chromosome | CDS | 1147514 | 651 | - | 0.417819 |
cspA | UTI89_C4097 | cold shock protein 7.4, transcriptional activator of hns | chromosome | CDS | 3987305 | 213 | + | 0.488263 |
cspC | UTI89_C2021 | cold shock protein CspC | chromosome | CDS | 1933915 | 210 | - | 0.457143 |
cspD | UTI89_C0885 | cold shock-like protein CspD | chromosome | CDS | 883151 | 255 | - | 0.47451 |
cspE | UTI89_C0627 | cold shock-like protein CspE | chromosome | CDS | 639656 | 294 | + | 0.42517 |
cspG | UTI89_C1051 | cold shock-like protein G | chromosome | CDS | 1039735 | 213 | + | 0.431925 |
cspH | UTI89_C1050 | cold shock-like protein H | chromosome | CDS | 1039237 | 213 | - | 0.478873 |
cueR | UTI89_C0518 | putative HTH-type transcriptional regulator | chromosome | CDS | 529418 | 408 | + | 0.566176 |
cysB | UTI89_C1544 | positive transcriptional regulator for cysteine regulon | chromosome | CDS | 1454802 | 975 | + | 0.487179 |
cytR | UTI89_C4519 | dual DNA-binding transcriptional regulator | chromosome | CDS | 4400429 | 1026 | - | 0.515595 |
dbpA | UTI89_C1614 | ATP-independent RNA helicase DbpA | chromosome | CDS | 1526667 | 1374 | + | 0.521106 |
deoR | UTI89_C0843 | DeoR transcriptional repressor | chromosome | CDS | 843190 | 759 | - | 0.504611 |
dgoR | UTI89_C4246 | galactonate operon transcriptional repressor | chromosome | CDS | 4136040 | 690 | - | 0.549275 |
dinG | UTI89_C0802 | probable ATP-dependent helicase DinG | chromosome | CDS | 795714 | 2151 | + | 0.542073 |
dpiA | UTI89_C0624 | transcriptional regulatory protein DpiA | chromosome | CDS | 636312 | 681 | + | 0.509545 |
dsdC | UTI89_C2695 | D-serine deaminase activator | chromosome | CDS | 2637962 | 942 | - | 0.478769 |
ebgR | UTI89_C3515 | ebg operon repressor | chromosome | CDS | 3449265 | 984 | + | 0.513211 |
envR | UTI89_C3706 | potential acrEF/envCD operon repressor | chromosome | CDS | 3630761 | 663 | - | 0.437406 |
evgA | UTI89_C2701 | putative positive transcription regulator | chromosome | CDS | 2645023 | 615 | + | 0.398374 |
exuR | UTI89_C3532 | exu regulon transcriptional regulator | chromosome | CDS | 3473167 | 792 | + | 0.511364 |
fadR | UTI89_C1373 | negative regulator for fad regulon, and positive activator of fabA | chromosome | CDS | 1307690 | 720 | + | 0.506944 |
fhlA | UTI89_C3094 | formate hydrogenlyase transcriptional activator | chromosome | CDS | 3013395 | 2115 | + | 0.518203 |
fis | UTI89_C3703 | site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription | chromosome | CDS | 3629227 | 297 | + | 0.468013 |
flgM | UTI89_C1196 | anti-FliA (anti-sigma) factor; also known as RflB protein | chromosome | CDS | 1174803 | 294 | - | 0.517007 |
fliA | UTI89_C2123 | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons | chromosome | CDS | 2024817 | 720 | - | 0.538889 |
focX | UTI89_C1117 | putative regulatory protein | chromosome | CDS | 1107147 | 552 | + | 0.384058 |
fruR | UTI89_C0089 | transcriptional repressor of fru operon and others | chromosome | CDS | 90470 | 1005 | + | 0.553234 |
fucR | UTI89_C3177 | L-fucose operon activator | chromosome | CDS | 3093864 | 741 | + | 0.479082 |
galR | UTI89_C3241 | galactose operon repressor | chromosome | CDS | 3167037 | 1032 | + | 0.52907 |
galS | UTI89_C2424 | GalS transcriptional repressor | chromosome | CDS | 2381838 | 1047 | - | 0.51767 |
gcvA | UTI89_C3180 | positive regulator of gcv operon | chromosome | CDS | 3096155 | 918 | - | 0.495643 |
glcC | UTI89_C3395 | Glc operon transcriptional activator | chromosome | CDS | 3331832 | 825 | + | 0.552727 |
glpR | UTI89_C3923 | glycerol-3-phosphate regulon repressor | chromosome | CDS | 3812662 | 810 | - | 0.52963 |
gntR | UTI89_C3946 | gluconate utilization system GNT-I transcriptional repressor | chromosome | CDS | 3839892 | 996 | - | 0.543173 |
greA | UTI89_C3614 | transcription elongation factor GreA (transcript cleavage factor GreA) | chromosome | CDS | 3548069 | 477 | - | 0.486373 |
greB | UTI89_C3907 | transcription elongation factor and transcript cleavage | chromosome | CDS | 3789444 | 513 | + | 0.495127 |
gutM | UTI89_C3068 | glucitol operon activator protein | chromosome | CDS | 2987015 | 360 | + | 0.541667 |
hdfR | UTI89_C4320 | HTH-type transcriptional regulator HdfR | chromosome | CDS | 4207996 | 840 | - | 0.480952 |
hepA | UTI89_C0064 | probable ATP-dependent RNA helicase | chromosome | CDS | 62198 | 2907 | - | 0.552804 |
hipB | UTI89_C1737 | HipB transcriptional activator | chromosome | CDS | 1664002 | 285 | - | 0.449123 |
hypB | UTI89_C3090 | hydrogenase isoenzymes nickel incorporation protein hypB | chromosome | CDS | 3010094 | 873 | + | 0.558992 |
ibrB | UTI89_C2237 | hypothetical protein YbdM | chromosome | CDS | 2176007 | 645 | - | 0.505426 |
iciA | UTI89_C3302 | replication initiation inhibitor, binds to 13-mers at oriC | chromosome | CDS | 3237332 | 960 | + | 0.536458 |
iclR | UTI89_C4576 | aceBAK operon repressor | chromosome | CDS | 4468429 | 885 | - | 0.533333 |
idnR | UTI89_C4871 | L-idonate regulatory protein | chromosome | CDS | 4771845 | 1029 | - | 0.469388 |
ilvY | UTI89_C4329 | transcriptional activator protein IlvY | chromosome | CDS | 4217742 | 975 | - | 0.562051 |
iscR | UTI89_C2853 | iscRSUA operon transcriptional regulator | chromosome | CDS | 2808705 | 489 | - | 0.533742 |
kdgR | UTI89_C2028 | transcriptional regulator KdgR | chromosome | CDS | 1935998 | 792 | - | 0.496212 |
kdpE | UTI89_C0698 | transcriptional regulatory protein KdpE | chromosome | CDS | 703054 | 678 | - | 0.564897 |
lacI | UTI89_C0372 | lac operon repressor | chromosome | CDS | 392314 | 1092 | - | 0.561355 |
leuO | UTI89_C0084 | probable activator protein in leuABCD operon | chromosome | CDS | 86810 | 945 | + | 0.462434 |
lexA | UTI89_C4613 | LexA, subunit of LexA transcriptional repressor | chromosome | CDS | 4506034 | 609 | + | 0.518883 |
lldR | UTI89_C4145 | putative L-lactate dehydrogenase operon Regulatory protein | chromosome | CDS | 4040902 | 792 | + | 0.534091 |
lrhA | UTI89_C2570 | probable transcriptional regulator LrhA | chromosome | CDS | 2537844 | 939 | - | 0.501597 |
lrp | UTI89_C0904 | leucine-responsive regulatory protein | chromosome | CDS | 902922 | 549 | + | 0.469945 |
lysR | UTI89_C3243 | transcriptional activator protein LysR | chromosome | CDS | 3169459 | 936 | + | 0.532051 |
malI | UTI89_C1808 | maltose regulon regulatory protein MalI | chromosome | CDS | 1738408 | 1029 | - | 0.544218 |
malT | UTI89_C3919 | MalT-maltotriose-ATP transcriptional activator | chromosome | CDS | 3805899 | 2706 | + | 0.538064 |
marA | UTI89_C1750 | multiple antibiotic resistance protein MarA | chromosome | CDS | 1676283 | 390 | + | 0.453846 |
marR | UTI89_C1749 | multiple antibiotic resistance protein MarR | chromosome | CDS | 1675834 | 435 | + | 0.489655 |
matA | UTI89_C0310 | hypothetical protein YkgK | chromosome | CDS | 321340 | 591 | - | 0.397631 |
melR | UTI89_C4712 | MelR regulator of melibiose operon | chromosome | CDS | 4614473 | 909 | - | 0.50165 |
metJ | UTI89_C4523 | transcriptional repressor | chromosome | CDS | 4404952 | 456 | - | 0.504386 |
metR | UTI89_C4392 | regulator for metE and MetH | chromosome | CDS | 4276857 | 954 | - | 0.569182 |
mfd | UTI89_C1242 | transcription-repair coupling factor; mutation frequency decline | chromosome | CDS | 1215498 | 3510 | - | 0.545014 |
mlc | UTI89_C1781 | putative NAGC-like transcriptional regulator | chromosome | CDS | 1707774 | 1221 | - | 0.520066 |
mntR | UTI89_C0821 | transcriptional regulator MntR | chromosome | CDS | 815857 | 468 | + | 0.540598 |
mprA | UTI89_C3044 | regulator of plasmid McrB operon | chromosome | CDS | 2967508 | 531 | + | 0.495292 |
mtlR | UTI89_C4139 | mannitol operon repressor | chromosome | CDS | 4031362 | 588 | + | 0.498299 |
nac | UTI89_C2202 | nitrogen assimilation regulatory protein nac | chromosome | CDS | 2112680 | 948 | - | 0.488397 |
nagC | UTI89_C0670 | transcriptional repressor of nag (N-acetylglucosamine) operon | chromosome | CDS | 675021 | 1221 | - | 0.527437 |
nanR | UTI89_C3656 | hypothetical transcriptional regulator NanR | chromosome | CDS | 3585046 | 792 | - | 0.535354 |
narL | UTI89_C1417 | NarL transcriptional dual regulator | chromosome | CDS | 1349427 | 717 | - | 0.514644 |
narP | UTI89_C2471 | nitrate/nitrite response regulator protein NarP | chromosome | CDS | 2427526 | 678 | + | 0.513274 |
nhaR | UTI89_C0023 | transcriptional activator protein NhaR | chromosome | CDS | 21323 | 924 | + | 0.472944 |
nikR | UTI89_C3998 | nickel responsive transcriptional regulator | chromosome | CDS | 3885077 | 402 | + | 0.549751 |
nlp | UTI89_C3622 | sugar fermentation stimulation protein B | chromosome | CDS | 3554587 | 279 | + | 0.494624 |
nrfB | UTI89_C4661 | NrfB, formate-dependent nitrite reductase; a penta-haeme cytochrome c | chromosome | CDS | 4558633 | 573 | + | 0.542757 |
nusA | UTI89_C3600 | transcription pausing; L factor | chromosome | CDS | 3535874 | 1488 | - | 0.526882 |
nusB | UTI89_C0439 | FJECB transcription termination; L factor | chromosome | CDS | 449381 | 420 | + | 0.542857 |
nusG | UTI89_C3839 | transcription antitermination protein | chromosome | CDS | 3726991 | 546 | - | 0.512821 |
ompR | UTI89_C3905 | transcriptional regulatory protein OmpR | chromosome | CDS | 3788533 | 720 | - | 0.548611 |
oxyR | UTI89_C4554 | hydrogen peroxide-inducible genes activator | chromosome | CDS | 4445525 | 963 | + | 0.554517 |
papI | UTI89_C4897 | pap operon regulatory protein PapI | chromosome | CDS | 4797957 | 234 | + | 0.448718 |
papX | UTI89_C4886 | putative regulator PapX protein | chromosome | CDS | 4788287 | 552 | - | 0.38587 |
pdhR | UTI89_C0125 | pyruvate dehydrogenase complex repressor | chromosome | CDS | 128288 | 798 | + | 0.552632 |
phnF | UTI89_C4697 | probable transcriptional regulator PhnF | chromosome | CDS | 4595943 | 735 | - | 0.617687 |
phnO | UTI89_C4688 | putative regulator, phn operon | chromosome | CDS | 4589350 | 435 | - | 0.577011 |
phoB | UTI89_C0420 | positive response regulator for pho regulon | chromosome | CDS | 431400 | 690 | + | 0.53913 |
phoP | UTI89_C1259 | transcriptional regulatory protein | chromosome | CDS | 1234756 | 672 | - | 0.473214 |
pspA | UTI89_C1574 | phage shock protein A | chromosome | CDS | 1487396 | 669 | + | 0.491779 |
pspC | UTI89_C1576 | phage shock protein C | chromosome | CDS | 1488342 | 360 | + | 0.505556 |
pspF | UTI89_C1573 | psp operon transcriptional activator | chromosome | CDS | 1486253 | 993 | - | 0.51863 |
purR | UTI89_C1849 | purine nucleotide synthesis repressor | chromosome | CDS | 1773602 | 1026 | + | 0.534113 |
rbsR | UTI89_C4308 | regulator for rbs operon | chromosome | CDS | 4199095 | 993 | + | 0.501511 |
rcsA | UTI89_C2151 | positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression, subunit of RcsB transcriptional act | chromosome | CDS | 2050066 | 624 | + | 0.383013 |
rcsB | UTI89_C2499 | positive response regulator for colanic capsule biosynthesis | chromosome | CDS | 2452435 | 696 | + | 0.468391 |
recG | UTI89_C4197 | ATP-dependent DNA helicase RecG | chromosome | CDS | 4083709 | 2115 | + | 0.568794 |
relA | UTI89_C3154 | GTP pyrophosphokinase | chromosome | CDS | 3065874 | 2235 | - | 0.540492 |
rfaH | UTI89_C4427 | transcriptional activator RfaH | chromosome | CDS | 4310760 | 489 | - | 0.492843 |
rhaR | UTI89_C4489 | L-rhamnose operon transcriptional activator rhaR | chromosome | CDS | 4375497 | 960 | + | 0.501042 |
rhaS | UTI89_C4488 | L-rhamnose operon regulatory protein RhaS | chromosome | CDS | 4374698 | 837 | + | 0.517324 |
rhlB | UTI89_C4334 | putative ATP-dependent RNA helicase | chromosome | CDS | 4224359 | 1266 | - | 0.521327 |
rhlE | UTI89_C0798 | putative ATP-dependent RNA helicase RhlE | chromosome | CDS | 793816 | 1362 | + | 0.563142 |
rho | UTI89_C4338 | transcription termination factor rho | chromosome | CDS | 4226339 | 1332 | + | 0.501502 |
rnb | UTI89_C1559 | exoribonuclease II | chromosome | CDS | 1467906 | 1935 | - | 0.530749 |
rnc | UTI89_C2888 | RNase III, ds RNA | chromosome | CDS | 2845130 | 681 | - | 0.512482 |
rnk | UTI89_C0612 | regulator of nucleoside diphosphate kinase | chromosome | CDS | 626007 | 411 | - | 0.549878 |
rob | UTI89_C5169 | right origin-binding protein | chromosome | CDS | 5058530 | 870 | - | 0.522988 |
rpiR | UTI89_C4684 | protein RpiR | chromosome | CDS | 4586465 | 924 | - | 0.479437 |
rpoA | UTI89_C3740 | RNA polymerase, alpha subunit | chromosome | CDS | 3657850 | 990 | - | 0.522222 |
rpoB | UTI89_C3832 | RNA polymerase beta subunit | chromosome | CDS | 3720127 | 4062 | - | 0.52388 |
rpoC | UTI89_C3831 | RNA polymerase, beta prime subunit | chromosome | CDS | 3715827 | 4224 | - | 0.536695 |
rpoD | UTI89_C3505 | RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures | chromosome | CDS | 3440857 | 1842 | + | 0.530402 |
rpoE | UTI89_C2895 | RNA polymerase sigma E | chromosome | CDS | 2851179 | 609 | - | 0.487685 |
rpoH | UTI89_C3976 | component of RNA polymerase, sigma 32 factor | chromosome | CDS | 3866248 | 855 | - | 0.534503 |
rpoN | UTI89_C3638 | RNA polymerase sigma-54 factor | chromosome | CDS | 3564395 | 1434 | + | 0.524407 |
rpoS | UTI89_C3111 | sigma factor RpoS | chromosome | CDS | 3028743 | 1029 | - | 0.522838 |
rpoZ | UTI89_C4194 | RNA polymerase, omega subunit | chromosome | CDS | 4080638 | 276 | + | 0.532609 |
rstA | UTI89_C1796 | transcriptional regulatory protein RstA | chromosome | CDS | 1722529 | 780 | + | 0.485897 |
rtcA | UTI89_C3920 | RNA 3'-terminal phosphate cyclase, chain B | chromosome | CDS | 3808647 | 1020 | - | 0.593137 |
rtcR | UTI89_C3922 | transcriptional regulator RtcR | chromosome | CDS | 3811082 | 1599 | + | 0.549719 |
sdiA | UTI89_C2117 | regulatory protein SdiA | chromosome | CDS | 2019857 | 735 | - | 0.458503 |
sfaC | UTI89_C1107 | putative S fimbrial switch regulatory protein | chromosome | CDS | 1098007 | 285 | - | 0.438596 |
slyA | UTI89_C1833 | transcriptional regulator SlyA | chromosome | CDS | 1760551 | 441 | - | 0.47619 |
soxR | UTI89_C4649 | redox-sensitive transcriptional activator SoxR | chromosome | CDS | 4546241 | 465 | + | 0.511828 |
soxS | UTI89_C4648 | regulation of superoxide response regulon | chromosome | CDS | 4545832 | 324 | - | 0.515432 |
spoT | UTI89_C4195 | guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase | chromosome | CDS | 4080932 | 2109 | + | 0.53817 |
srlR | UTI89_C3069 | glucitol operon repressor | chromosome | CDS | 2987441 | 774 | + | 0.48708 |
tdcA | UTI89_C3553 | tdc operon transcriptional activator | chromosome | CDS | 3492033 | 939 | - | 0.42279 |
torR | UTI89_C1059 | TorCAD operon transcriptional regulatory protein torR | chromosome | CDS | 1045535 | 693 | - | 0.535354 |
treR | UTI89_C4845 | trehalose operon repressor | chromosome | CDS | 4746145 | 948 | - | 0.542194 |
trpR | UTI89_C5166 | trp operon repressor | chromosome | CDS | 5056908 | 327 | + | 0.538226 |
ttk | UTI89_C4185 | putative transcriptional regulator | chromosome | CDS | 4072980 | 639 | + | 0.528951 |
tyrR | UTI89_C1594 | transcriptional regulatory protein TyrR | chromosome | CDS | 1505948 | 1569 | + | 0.518802 |
uhpA | UTI89_C4225 | response regulator for uhpBA two component regulatory system | chromosome | CDS | 4116156 | 591 | - | 0.58714 |
uidR | UTI89_C1806 | repressor for uid operon | chromosome | CDS | 1736710 | 591 | - | 0.505922 |
umuD | UTI89_C1369 | UmuD protein | chromosome | CDS | 1303519 | 420 | + | 0.480952 |
uvrY | UTI89_C2115 | putative 2-component transcriptional regulator | chromosome | CDS | 2018450 | 657 | - | 0.496195 |
uxuR | UTI89_C5020 | UxuR uxu operon transcriptional regulator | chromosome | CDS | 4918126 | 774 | + | 0.541344 |
xapR | UTI89_C2736 | xanthosine operon regulatory protein | chromosome | CDS | 2681359 | 900 | - | 0.51 |
xylR | UTI89_C4110 | putative regulator of xyl operon | chromosome | CDS | 4000831 | 1179 | + | 0.486853 |
yafP | UTI89_C0274 | hypothetical acetyltransferase YafP | chromosome | CDS | 284708 | 453 | + | 0.439294 |
yahA | UTI89_C0344 | hypothetical protein YahA | chromosome | CDS | 358334 | 1095 | + | 0.454795 |
yahB | UTI89_C0345 | hypothetical transcriptional regulator YahB | chromosome | CDS | 359470 | 933 | - | 0.501608 |
yaiV | UTI89_C0390 | hypothetical protein YaiV | chromosome | CDS | 408698 | 669 | + | 0.402093 |
yajF | UTI89_C0415 | putative NAGC-like transcriptional regulator | chromosome | CDS | 424243 | 1047 | + | 0.538682 |
ybaD | UTI89_C0435 | hypothetical protein | chromosome | CDS | 447246 | 450 | + | 0.511111 |
ybbS | UTI89_C0533 | hypothetical transcriptional regulator YbbS | chromosome | CDS | 542036 | 927 | - | 0.523193 |
ybbU | UTI89_C0535 | putative regulator of allantoin regulon YbbU | chromosome | CDS | 543752 | 816 | + | 0.529412 |
ybcM | UTI89_C2134 | hypothetical transcriptional regulator YbcM | chromosome | CDS | 2036593 | 798 | - | 0.370927 |
ybdM | UTI89_C0604 | hypothetical protein YbdM | chromosome | CDS | 618609 | 630 | - | 0.463492 |
ybdO | UTI89_C0606 | hypothetical transcriptional regulator YbdO | chromosome | CDS | 620578 | 939 | - | 0.371672 |
ybhD | UTI89_C0766 | hypothetical transcriptional regulator YbhD | chromosome | CDS | 762812 | 1017 | - | 0.446411 |
yccR | UTI89_C1025 | hypothetical protein YccR | chromosome | CDS | 1018459 | 630 | + | 0.477778 |
ycdC | UTI89_C1076 | hypothetical transcriptional regulator YcdC | chromosome | CDS | 1061146 | 666 | + | 0.509009 |
ycfQ | UTI89_C1239 | YcfQ gene product | chromosome | CDS | 1213179 | 711 | - | 0.506329 |
ycfX | UTI89_C1247 | putative NAGC-like transcriptional regulator | chromosome | CDS | 1223573 | 912 | + | 0.529605 |
ycgE | UTI89_C1344 | hypothetical transcriptional regulator YcgE | chromosome | CDS | 1289664 | 732 | - | 0.48224 |
ycjA | UTI89_P094 | hypothetical protein | pUTI89 | CDS | 70757 | 2049 | + | 0.578331 |
ycjW | UTI89_C1591 | hypothetical transcriptional regulator YcjW | chromosome | CDS | 1502218 | 999 | - | 0.45045 |
ycjZ | UTI89_C0318 | hypothetical transcriptional regulator YcjZ | chromosome | CDS | 327751 | 969 | + | 0.50258 |
ydcI | UTI89_C1643 | hypothetical transcriptional regulator YdcI | chromosome | CDS | 1567418 | 1065 | - | 0.48169 |
ydcN | UTI89_C1653 | hypothetical protein YdcN | chromosome | CDS | 1577695 | 537 | + | 0.497207 |
ydcR | UTI89_C1658 | hypothetical protein YdcR | chromosome | CDS | 1581081 | 1407 | + | 0.508884 |
ydfH | UTI89_C1763 | hypothetical protein | chromosome | CDS | 1690336 | 687 | + | 0.502183 |
ydhB | UTI89_C1850 | putative transcriptional regulator LYSR-type | chromosome | CDS | 1774624 | 933 | - | 0.535906 |
ydhM | UTI89_C1840 | hypothetical protein | chromosome | CDS | 1766184 | 600 | + | 0.525 |
ydiP | UTI89_C1888 | hypothetical transcriptional regulator YdiP | chromosome | CDS | 1813978 | 912 | - | 0.427632 |
ydjF | UTI89_C1966 | putative DEOR-type transcriptional regulator | chromosome | CDS | 1886344 | 759 | - | 0.424242 |
yeaM | UTI89_C1986 | hypothetical transcriptional regulator YeaM | chromosome | CDS | 1907006 | 822 | - | 0.50365 |
yebK | UTI89_C2057 | Hex regulon repressor | chromosome | CDS | 1963340 | 870 | + | 0.489655 |
yedW | UTI89_C2168 | putative 2-component transcriptional regulator yedW | chromosome | CDS | 2064176 | 783 | - | 0.436782 |
yeeY | UTI89_C2288 | hypothetical transcriptional regulator YeeY | chromosome | CDS | 2225736 | 951 | - | 0.508938 |
yegW | UTI89_C2375 | putative transcriptional regulator | chromosome | CDS | 2322793 | 747 | - | 0.519411 |
yehT | UTI89_C2397 | hypothetical protein | chromosome | CDS | 2353464 | 735 | - | 0.502041 |
yehV | UTI89_C2399 | putative transcriptional regulator | chromosome | CDS | 2356087 | 732 | + | 0.528689 |
yeiE | UTI89_C2432 | putative transcriptional regulator LYSR-type | chromosome | CDS | 2389945 | 882 | - | 0.537415 |
yejH | UTI89_C2461 | hypothetical protein YejH | chromosome | CDS | 2420682 | 1761 | + | 0.533788 |
yfaX | UTI89_C2530 | hypothetical transcriptional regulator YfaX | chromosome | CDS | 2497449 | 783 | - | 0.509579 |
yfeD | UTI89_C2730 | hypothetical protein | chromosome | CDS | 2678734 | 393 | + | 0.463104 |
yfeG | UTI89_C2770 | putative ARAC-type regulatory protein | chromosome | CDS | 2710564 | 1053 | - | 0.526116 |
yfeR | UTI89_C2740 | putative transcriptional regulator LysR-type | chromosome | CDS | 2685697 | 927 | - | 0.540453 |
yfhH | UTI89_C2881 | hypothetical protein | chromosome | CDS | 2840434 | 921 | + | 0.508143 |
yfiE | UTI89_C2899 | hypothetical transcriptional regulator YfiE | chromosome | CDS | 2856005 | 927 | - | 0.483279 |
ygaA | UTI89_C3071 | hypothetical sigma-54-dependent transcriptional regulator ygaA | chromosome | CDS | 2989169 | 1515 | - | 0.566337 |
ygaV | UTI89_C3023 | hypothetical transcriptional regulator protein | chromosome | CDS | 2952070 | 300 | + | 0.52 |
ygbI | UTI89_C3101 | hypothetical transcriptional regulator YgbI | chromosome | CDS | 3020604 | 798 | - | 0.518797 |
ygcP | UTI89_C3132 | putative anti-terminator regulatory protein | chromosome | CDS | 3046960 | 576 | + | 0.465278 |
ygfI | UTI89_C3304 | hypothetical transcriptional regulator YgfI | chromosome | CDS | 3239546 | 897 | - | 0.443701 |
ygiP | UTI89_C3496 | hypothetical transcriptional regulator YgiP | chromosome | CDS | 3433134 | 981 | - | 0.490316 |
ygiX | UTI89_C3450 | transcriptional Regulatory protein QseB | chromosome | CDS | 3387184 | 660 | + | 0.525758 |
yhaJ | UTI89_C3542 | hypothetical transcriptional regulator YhaJ | chromosome | CDS | 3479226 | 897 | - | 0.560758 |
yhcO | UTI89_C3670 | hypothetical protein | chromosome | CDS | 3595522 | 273 | - | 0.424908 |
yhcS | UTI89_C3674 | putative transcriptional regulator LYSR-type | chromosome | CDS | 3599185 | 930 | + | 0.521505 |
yhdM | UTI89_C3737 | Zn(II)-responsive regulator of ZntA | chromosome | CDS | 3656515 | 426 | - | 0.5 |
yhiE | UTI89_C4043 | hypothetical protein | chromosome | CDS | 3925067 | 606 | + | 0.344884 |
yhiF | UTI89_C4026 | hypothetical transcriptional regulator YhiF | chromosome | CDS | 3912443 | 531 | + | 0.399247 |
yhiW | UTI89_C4047 | hypothetical transcriptional regulator YhiW | chromosome | CDS | 3930669 | 729 | - | 0.410151 |
yhiX | UTI89_C4048 | Transcriptional regulator GadX | chromosome | CDS | 3931766 | 825 | - | 0.410909 |
yhjB | UTI89_C4052 | hypothetical transcriptional regulator YhjB | chromosome | CDS | 3938071 | 603 | - | 0.474295 |
yhjC | UTI89_C4053 | hypothetical transcriptional regulator YhjC | chromosome | CDS | 3939121 | 972 | + | 0.51749 |
yiaC | UTI89_C4090 | hypothetical acetyltransferase YiaC | chromosome | CDS | 3980908 | 441 | + | 0.519274 |
yiaG | UTI89_C4095 | hypothetical protein | chromosome | CDS | 3986734 | 291 | + | 0.436426 |
yiaJ | UTI89_C4116 | hypothetical transcriptional regulator YiaJ | chromosome | CDS | 4007449 | 849 | - | 0.518257 |
yidL | UTI89_C4234 | hypothetical transcriptional regulator YidL | chromosome | CDS | 4125192 | 897 | + | 0.433668 |
yidZ | UTI89_C4264 | hypothetical transcriptional regulator YidZ | chromosome | CDS | 4154324 | 969 | + | 0.522188 |
yieP | UTI89_C4310 | hypothetical transcriptional regulator YieP | chromosome | CDS | 4201503 | 693 | - | 0.493506 |
yihW | UTI89_C4461 | hypothetical transcriptional regulator YihW | chromosome | CDS | 4346292 | 789 | - | 0.501901 |
yiiD | UTI89_C4472 | putative acetyltransferase | chromosome | CDS | 4356886 | 990 | + | 0.540404 |
yiiE | UTI89_C4477 | hypothetical protein YiiE | chromosome | CDS | 4360684 | 246 | + | 0.46748 |
yijC | UTI89_C4558 | hypothetical protein YijC | chromosome | CDS | 4450775 | 705 | + | 0.526241 |
yijO | UTI89_C4545 | hypothetical transcriptional regulator YijO | chromosome | CDS | 4431783 | 852 | - | 0.529343 |
yjaB | UTI89_C4571 | hypothetical acetyltransferase YjaB | chromosome | CDS | 4461906 | 444 | - | 0.531532 |
yjaE | UTI89_C3824 | regulator of sigma D | chromosome | CDS | 3709514 | 477 | + | 0.480084 |
yjdC | UTI89_C4732 | hypothetical protein | chromosome | CDS | 4634845 | 600 | - | 0.535 |
yjdG | UTI89_C4718 | DcuR transcriptional activator | chromosome | CDS | 4621424 | 720 | - | 0.494444 |
yjeB | UTI89_C4778 | hypothetical protein | chromosome | CDS | 4678002 | 426 | + | 0.483568 |
yjfJ | UTI89_C4782 | hypothetical protein | chromosome | CDS | 4682277 | 699 | + | 0.509299 |
yjfQ | UTI89_C4791 | putative DEOR-type transcriptional regulator | chromosome | CDS | 4689421 | 756 | - | 0.503968 |
yjjM | UTI89_C5063 | hypothetical protein YjjM | chromosome | CDS | 4972712 | 906 | - | 0.469095 |
yjjQ | UTI89_C5071 | hypothetical protein YjjQ | chromosome | CDS | 4981247 | 726 | + | 0.450413 |
ykgA | UTI89_C0322 | hypothetical transcriptional regulator YkgA | chromosome | CDS | 335558 | 891 | - | 0.432099 |
ykgD | UTI89_C0328 | hypothetical transcriptional regulator YkgD | chromosome | CDS | 340143 | 906 | + | 0.5 |
ylcA | UTI89_C0571 | putative 2-component transcriptional regulator | chromosome | CDS | 580339 | 684 | - | 0.545322 |
ymfK | UTI89_C3004 | putative phage repressor | chromosome | CDS | 2935003 | 675 | + | 0.447407 |
yneJ | UTI89_C1745 | hypothetical transcriptional regulator YneJ | chromosome | CDS | 1672522 | 882 | + | 0.539683 |
ynfL | UTI89_C1782 | hypothetical transcriptional regulator YnfL | chromosome | CDS | 1709129 | 894 | - | 0.521253 |
ypdB | UTI89_C2713 | hypothetical protein YpdB | chromosome | CDS | 2661633 | 756 | + | 0.47619 |
ypdC | UTI89_C2714 | hypothetical transcriptional regulator YpdC | chromosome | CDS | 2662401 | 858 | + | 0.526807 |
yphH | UTI89_C2869 | hypothetical protein YphH | chromosome | CDS | 2824724 | 1194 | + | 0.514238 |
yqfE | UTI89_C3301 | hypothetical protein YqfE | chromosome | CDS | 3237027 | 279 | - | 0.537634 |
yqgE | UTI89_C3337 | hypothetical protein | chromosome | CDS | 3270517 | 636 | + | 0.511006 |
yqhC | UTI89_C3430 | hypothetical transcriptional regulator YqhC | chromosome | CDS | 3364855 | 1128 | - | 0.5 |
yqjI | UTI89_C3509 | hypothetical protein YqjI | chromosome | CDS | 3444578 | 624 | + | 0.538462 |
yrbA | UTI89_C3624 | hypothetical protein | chromosome | CDS | 3556227 | 270 | - | 0.503704 |
ytfH | UTI89_C4821 | hypothetical protein | chromosome | CDS | 4715548 | 492 | + | 0.51626 |