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2024-05-18 07:57:33

Gene list

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COG category: Transcription
Organism: Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150

Number of genes found: 319

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Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPA0490 putative DNA-binding proteinchromosome CDS561163 249 - 0.473896
NA SPA1316 putative regulatory proteinchromosome CDS1401280 231 - 0.480519
NA SPA3458 gntR family regulatory proteinchromosome CDS3567951 720 - 0.4875
NA SPA3885 putative DNA-binding proteinchromosome CDS4030878 567 + 0.587302
NA SPA0589 hypothetical proteinchromosome CDS665035 696 - 0.387931
NA SPA0031 putative transcriptional regulator (lysR family)chromosome CDS33357 996 + 0.385542
NA SPA1213 putative transcriptional regulatorchromosome CDS1281516 852 - 0.388498
NA SPA4248 putative BglB-family transcriptional antiterminatorchromosome CDS4419374 1974 + 0.5385
NA SPA1463 putative transcriptional regulatorchromosome CDS1536309 729 + 0.541838
NA SPA1580 putative transcriptional regulatorchromosome CDS1649828 849 - 0.460542
NA SPA0032 putative transcription regulatorchromosome CDS34369 438 - 0.351598
NA SPA0671 putative transcriptional regulatorchromosome CDS753471 909 - 0.548955
NA SPA0167 putative transcriptional regulatorchromosome CDS195681 768 + 0.552083
NA SPA2887 possible regulatory proteinchromosome CDS2998589 864 - 0.552083
NA SPA3490 putative lacI-family transcriptional regulatorchromosome CDS3612862 1008 + 0.59623
NA SPA2375 possible transmembrane regulatorchromosome CDS2475289 684 - 0.406433
NA SPA4131 putative GerE family regulatory proteinchromosome CDS4311870 288 - 0.298611
NA SPA2879 possible regulatory proteinchromosome CDS2989299 1020 + 0.572549
NA SPA3503 putative acetyltransferasechromosome CDS3625356 486 - 0.49177
NA SPA0141 putative LysR-family transcriptional regulatorchromosome CDS164555 942 + 0.522293
NA SPA3044 possible AraC-family transcriptional regulatorchromosome CDS3149896 867 - 0.576701
NA SPA3911 putative GntR-family regulatory proteinchromosome CDS4057051 732 + 0.515027
NA SPA4087 lysR family regulatory proteinchromosome CDS4261310 888 - 0.559685
NA SPA0583 putative transcriptional regulatorchromosome CDS657854 879 - 0.476678
NA SPA1581 putative regulatory proteinchromosome CDS1650745 594 - 0.360269
NA SPA2049 lysR-family transcriptional regulatorchromosome CDS2134265 927 + 0.562028
NA SPA2154 putative tetR-family transcriptional regulatorchromosome CDS2243766 582 + 0.527491
NA SPA1207 putative transcriptional regulatorchromosome CDS1275919 906 + 0.545254
NA SPA1220 conserved hypothetical DNA-binding proteinchromosome CDS1288281 603 + 0.517413
NA SPA0503 putative transcriptional regulatorchromosome CDS573609 1428 - 0.519608
NA SPA4309 putative GerE-family regulatory proteinchromosome CDS4478586 351 + 0.566952
NA SPA2082 putative sigma-54 dependent transcriptional regulatorchromosome CDS2165991 1929 - 0.497667
NA SPA4132 araC family regulatory proteinchromosome CDS4312154 876 - 0.356164
NA SPA1293 putative regulatory proteinchromosome CDS1371218 579 - 0.56304
NA SPA2820 hypothetical proteinchromosome CDS2921442 288 - 0.486111
NA SPA3529 putative transcriptional regulatorchromosome CDS3652697 816 - 0.541667
NA SPA2414 transcriptional activator-regulatory proteinchromosome CDS2516877 690 + 0.437681
NA SPA0014 putative regulatory proteinchromosome CDS15007 948 + 0.407173
NA SPA2769 possible LysR-family transcriptional regulatorchromosome CDS2867604 912 + 0.546053
NA SPA0017 hypothetical proteinchromosome CDS17036 444 - 0.378378
NA SPA0519 putative transcriptional regulatorchromosome CDS589507 1020 - 0.557843
NA SPA3628 putative DNA-binding proteinchromosome CDS3767269 324 + 0.484568
NA SPA0375 hypothetical proteinchromosome CDS441004 1125 + 0.495111
NA SPA1797 putative transcriptional regulatorchromosome CDS1858943 462 + 0.487013
NA SPA2961 probable global regulatory protein homologchromosome CDS3068487 687 - 0.569141
NA SPA3623 putative NtrC family transcriptional regulators, ATPase domainchromosome CDS3760690 2799 - 0.54841
NA SPA3225 possible GntR-family transcriptional regulatorchromosome CDS3332446 630 - 0.490476
NA SPA2992 LysR-family transcriptional regulatorchromosome CDS3092915 684 + 0.444444
NA SPA4033 deoR family regulatory proteinchromosome CDS4188763 759 - 0.458498
NA SPA1210 putative transcriptional regulatorchromosome CDS1278851 591 + 0.566836
NA SPA0656 putative DNA-binding proteinchromosome CDS738584 390 + 0.520513
NA SPA2654 putative transcriptional regulatorchromosome CDS2761868 300 + 0.513333
NA SPA4240 hypothetical proteinchromosome CDS4413918 339 + 0.545723
NA SPA1918 transcriptional regulator (iron dependant repressor family)chromosome CDS1998127 474 - 0.523207
NA SPA3950 putative GntR-family regulatory proteinchromosome CDS4098928 1482 - 0.601889
NA SPA2372 possible transcriptionl regulatorchromosome CDS2473058 528 - 0.410985
NA SPA3635 putative GntR-family transcriptional regulatorchromosome CDS3772571 744 - 0.407258
NA SPA2360 AraC-family transcriptional regulatorchromosome CDS2460533 1005 - 0.578109
NA SPA3224 possible transcriptional regulatorchromosome CDS3331794 606 - 0.4967
NA SPA2777 slyA-like proteinchromosome CDS2875564 405 - 0.535802
NA SPA1724 putative transcriptional regulatorchromosome CDS1782168 882 + 0.493197
NA SPA3532 putative sugar kinasechromosome CDS3657724 882 + 0.564626
NA SPA4135 Putative acetyltransferasechromosome CDS4314124 492 + 0.567073
NA SPA1015 putative acetyltransferasechromosome CDS1086729 420 + 0.421429
NA SPA4263 putative transcriptional regulatorchromosome CDS4435207 489 - 0.476483
NA SPA1003 hypothetical proteinchromosome CDS1076236 396 + 0.515152
NA SPA1846 hypothetical transcriptional activatorchromosome CDS1922279 912 - 0.576754
NA SPA3399 putative ribokinasechromosome CDS3507489 1215 + 0.413992
NA SPA0290 putative transcriptional regulatorchromosome CDS325015 927 - 0.431499
NA SPA1768 bacterial regulatory protein, AraC familychromosome CDS1824799 780 - 0.541026
NA SPA3548 putative lacI family transcriptional regulator regulatorchromosome CDS3678078 1056 - 0.545455
NA SPA2660 hypothetical proteinchromosome CDS2765558 1335 - 0.567041
NA SPA3588 putative regulatory proteinchromosome CDS3717093 903 - 0.535991
NA SPA3644 putative DeoR-family transcriptional regulatorchromosome CDS3783035 786 + 0.521628
NA SPA2313 putative deoR-family transcriptional regulatorchromosome CDS2406659 693 - 0.52381
NA SPA2761 hypothetical proteinchromosome CDS2860531 525 + 0.470476
aac SPA1250 aminoglycoside 6'-N-acetyltransferasechromosome CDS1323170 438 - 0.513699
abc1 SPA2424 hypothetical proteinchromosome CDS2521894 285 + 0.414035
acrR SPA2245 potential acrAB operon repressorchromosome CDS2339052 654 - 0.466361
adiY SPA4113 putative AraC family regulatory proteinchromosome CDS4289571 762 - 0.437008
agaR SPA3121 hypothetical proteinchromosome CDS3231541 834 - 0.519185
allR SPA2206 negative regulator of allantoin and glyoxylate utilization operonschromosome CDS2295863 819 - 0.550672
araC SPA0106 arabinose operon regulatory proteinchromosome CDS123147 846 + 0.536643
arcA SPA4408 global response regulatorchromosome CDS4583167 717 - 0.525802
argR SPA3227 arginine repressorchromosome CDS3334547 471 + 0.503185
asnC SPA3715 regulatory proteinchromosome CDS3859718 459 - 0.505447
baeR SPA0734 putative two-component system response regulatorchromosome CDS813532 723 - 0.542185
bglJ SPA4362 conserved hypothetical regulatory proteinchromosome CDS4539423 624 + 0.5
cI SPA2599 phage repressor protein cIchromosome CDS2693832 633 + 0.43128
celD SPA1529 putative cel operon repressorchromosome CDS1604022 840 - 0.430952
citB SPA0053 transcriptional regulatory protein citbchromosome CDS61066 687 - 0.484716
cobB SPA1629 NAD-dependent deacetylasechromosome CDS1691897 714 - 0.532213
copR SPA1754 response regulatorchromosome CDS1814007 681 + 0.515419
cpxR SPA3902 two-component response regulatory proteinchromosome CDS4047782 699 - 0.543634
creB SPA4398 putative two-component response regulatorchromosome CDS4572035 690 + 0.581159
csgD SPA1709 putative regulatory proteinchromosome CDS1768498 651 + 0.40553
csiE SPA0313 stationary phase inducible protein CsiEchromosome CDS354313 1278 - 0.546948
cspA SPA3501 cold shock proteinchromosome CDS3624053 213 + 0.469484
cspB SPA0874 cold shock proteinchromosome CDS959520 213 + 0.42723
cspC SPA1036 cold shock-like protein CspCchromosome CDS1106376 210 + 0.471429
cspD SPA1856 cold shock-like protein CspDchromosome CDS1931647 222 + 0.518018
cspE SPA2105 cold shock protein Echromosome CDS2189326 210 - 0.438095
cspH SPA1603 putative cold shock proteinchromosome CDS1665600 213 + 0.469484
cueR SPA2223 copper efflux regulatorchromosome CDS2312093 417 - 0.522782
cysB SPA1163 transcriptional regulator for cysteine regulonchromosome CDS1232960 975 + 0.517949
cytR SPA3937 transcriptional repressorchromosome CDS4080226 1026 - 0.535088
dbpA SPA1230 ATP-dependent RNA helicase, stimulated by 23S rRNAchromosome CDS1297118 1374 + 0.556041
dcuR SPA4121 two-component response regulatorchromosome CDS4301110 720 - 0.494444
deaD SPA3147 ATP-dependent RNA helicasechromosome CDS3254940 1890 - 0.579365
deoR SPA1898 deoxyribose operon repressorchromosome CDS1973458 759 + 0.517787
dinG SPA1932 LexA regulated (SOS) repair enzymechromosome CDS2011570 2145 - 0.544056
dpiA SPA2108 transcriptional regulatory protein DpiAchromosome CDS2192113 681 - 0.531571
dsdC SPA3651 D-serine deaminase activatorchromosome CDS3790109 924 - 0.53355
ecnR SPA4154 transcriptional regulatory proteinchromosome CDS4330396 588 - 0.460884
emrR SPA2671 putative transcriptional regulatorchromosome CDS2776948 531 + 0.485876
envR SPA3256 transcriptional repressor for envCD (acrEF) (TetR/AcrR family)chromosome CDS3366550 663 - 0.434389
fadR SPA1068 fatty acid metabolism regulatorchromosome CDS1135529 720 + 0.523611
fimW SPA2173 fimbriae w proteinchromosome CDS2261264 597 + 0.41876
fimZ SPA2176 probable transcriptional regulator (FimXZ protein)chromosome CDS2263678 633 + 0.406003
fis SPA3252 DNA-binding protein Fischromosome CDS3362785 297 + 0.464646
flgM SPA1679 negative regulator of flagellin synthesis (anti-sigma factor)chromosome CDS1741536 294 + 0.517007
fliA SPA0913 flagellar biosynthesis sigma factor FliAchromosome CDS992784 690 + 0.550725
fruR SPA0120 fructose repressorchromosome CDS139841 1005 + 0.567164
fucR SPA2843 l-fucose operon activatorchromosome CDS2949626 711 + 0.500703
galR SPA2878 galactose operon repressorchromosome CDS2988257 1029 + 0.557823
galS SPA0660 mgl repressor and galactose ultrainduction factorchromosome CDS742124 1023 + 0.561095
gatR SPA3131 galactitol utilization operon repressorchromosome CDS3241572 774 + 0.50646
gcvA SPA2846 regulatory protein for glycine cleavage pathwaychromosome CDS2951902 918 - 0.506536
glpR SPA3381 glycerol-3-phosphate regulon repressorchromosome CDS3485405 759 - 0.537549
gntR SPA3394 gluconate utilization operon repressorchromosome CDS3503287 996 - 0.575301
greA SPA3166 transcription elongation factor GreAchromosome CDS3275397 477 - 0.505241
greB SPA3368 transcription elongation factor GreBchromosome CDS3466265 474 + 0.514768
hepA SPA0097 ATP-dependent helicase HepAchromosome CDS109892 2907 - 0.568627
hexR SPA0982 putative hex-regulon repressorchromosome CDS1054751 870 - 0.512644
hilD SPA2733 AraC-family transcriptional regulatorchromosome CDS2832382 930 + 0.409677
hpaA SPA1742 4-hydroxyphenylacetate 3-monooxygenase operon regulatory proteinchromosome CDS1802006 897 - 0.522854
hpcR SPA1750 homoprotocatechuate degradative operon repressorchromosome CDS1810378 441 + 0.52381
hsdS SPA4290 subunit S of type I restriction-modification systemchromosome CDS4463654 237 + 0.438819
hutC SPA1963 histidine utilization repressorchromosome CDS2045299 726 - 0.571625
hypB SPA2713 hydrogenase isoenzyme formation protein HypBchromosome CDS2815646 873 + 0.579611
iagA SPA2734 invasion protein regulatorchromosome CDS2834402 1662 + 0.43201
iciA SPA2935 chromosome replication initiation inhibitor proteinchromosome CDS3043211 894 + 0.580537
iclR SPA4025 acetate operon repressorchromosome CDS4179293 825 - 0.585455
idnR SPA4281 regulatory proteinchromosome CDS4454762 999 - 0.502503
ilvY SPA3747 LysR-family regulatory protein for ilvC expressionchromosome CDS3891972 888 - 0.585586
invF SPA2757 possible AraC-family regulatory proteinchromosome CDS2857818 651 - 0.460829
kdgR SPA1031 transcriptional regulator KdgRchromosome CDS1103670 792 + 0.496212
kdpE SPA2039 KDP operon transcriptional regulatory proteinchromosome CDS2123527 678 + 0.567847
lctR SPA3545 putative L-lactate dehydrogenase operon regulatorchromosome CDS3675509 777 + 0.568855
leuO SPA0117 leucine transcriptional activatorchromosome CDS136073 945 + 0.480423
lexA SPA4054 LexA repressorchromosome CDS4214020 609 + 0.545156
lrhA SPA0534 NADH dehydrogenase operon transcriptional regulatorchromosome CDS606859 936 + 0.523504
lrp SPA1839 leucine-responsive regulatory proteinchromosome CDS1915298 495 - 0.490909
lysR SPA2881 transcriptional activator protein LysRchromosome CDS2991708 936 + 0.584402
malT SPA3380 transcriptional regulator MalTchromosome CDS3482626 2706 + 0.556911
marA SPA1336 multiple antibiotic resistance protein MarAchromosome CDS1419379 435 + 0.455172
marR SPA1335 multiple antibiotic resistance protein MarRchromosome CDS1418976 435 + 0.482759
marT SPA3610 putative transcriptional regulatory proteinchromosome CDS3746247 858 - 0.469697
melR SPA4115 melibiose operon regulatory proteinchromosome CDS4293130 933 - 0.519828
metJ SPA3942 transcriptional repressor protein MetJchromosome CDS4087174 318 - 0.518868
metR SPA3805 trans-activator of metE and metHchromosome CDS3946779 954 - 0.583857
mfd SPA1634 transcription-repair coupling factor (TrcF)chromosome CDS1697150 3447 + 0.570641
mlc SPA1366 putative regulatory proteinchromosome CDS1445955 1221 - 0.517609
nagC SPA2059 N-acetylglucosamine repressorchromosome CDS2147847 1221 + 0.53317
nanK SPA3204 N-acetylmannosamine kinasechromosome CDS3312367 876 - 0.598173
narL SPA1106 nitrate/nitrite response regulator protein NarLchromosome CDS1175404 651 - 0.534562
narP SPA0618 nitrate/nitrite response regulator protein NarPchromosome CDS697919 648 - 0.523148
nhaR SPA0041 transcriptional activator protein NhaRchromosome CDS47384 900 + 0.506667
nikR SPA3435 nickel responsive regulatorchromosome CDS3542169 402 + 0.547264
nlp SPA3173 Ner-like regulatory proteinchromosome CDS3282017 288 + 0.493056
nusA SPA3155 transcription elongation factor NusAchromosome CDS3265068 1503 - 0.525615
nusB SPA2305 transcription antitermination protein NusBchromosome CDS2401104 420 - 0.528571
nusG SPA3986 transcription antitermination protein NusGchromosome CDS4136031 546 + 0.543956
ompR SPA3367 osmolarity response regulatorchromosome CDS3465320 720 - 0.566667
oxyR SPA3963 hydrogen peroxide-inducible regulon activatorchromosome CDS4116830 918 + 0.565359
pdhR SPA0155 transcriptional regulator of pyruvate dehydrogenase complexchromosome CDS178546 765 + 0.563399
pduD SPA0830 diol dehydratase medium subunitchromosome CDS925519 675 - 0.57037
phnO SPA4105 putative acetyltransferasechromosome CDS4280952 456 - 0.486842
phnR SPA2293 probable regulator of 2-aminoethylphosphonate uptake and metabolism operonchromosome CDS2388982 720 + 0.590278
phoB SPA2326 phosphate regulon transcriptional regulatory protein PhoBchromosome CDS2421563 642 - 0.546729
phoP SPA1619 transcriptional regulatory protein PhoP, regulator of virulence determinantschromosome CDS1680130 675 + 0.515556
pmrA SPA4110 two-component response regulatorchromosome CDS4285652 669 - 0.541106
pocR SPA0835 pdu/cob regulatory protein PocRchromosome CDS930480 948 + 0.448312
prpR SPA2356 propionate catabolism operon regulatory proteinchromosome CDS2455338 1626 + 0.555966
pspA SPA1194 phage shock protein Achromosome CDS1264357 669 + 0.512706
pspC SPA1196 phage shock protein Cchromosome CDS1265309 360 + 0.522222
pspF SPA1193 psp operon transcriptional activator PspFchromosome CDS1263206 981 - 0.544343
ptsJ SPA0429 putative transcriptional regulatorchromosome CDS497669 1293 - 0.590874
purR SPA1423 purine nucleotide synthesis repressorchromosome CDS1503353 1026 + 0.54191
ramA SPA2153 transcriptional activator RamAchromosome CDS2243136 342 - 0.505848
rcsA SPA0888 colanic acid capsullar biosynthesis activation protein Achromosome CDS970889 624 - 0.383013
rcsB SPA0594 regulator of capsule synthesis B componentchromosome CDS674624 651 - 0.493088
recG SPA3596 ATP-dependent DNA helicasechromosome CDS3725540 2082 + 0.583573
relA SPA2821 GTP pyrophosphokinasechromosome CDS2921882 2235 - 0.555257
rfaH SPA3818 transcriptional activator RfaHchromosome CDS3961143 489 - 0.492843
rhaR SPA3892 L-rhamnose operon transcriptional activatorchromosome CDS4038091 849 + 0.497055
rhaS SPA3891 L-rhamnose operon regulatory proteinchromosome CDS4037102 837 + 0.538829
rhlE SPA1933 putative ATP-dependent RNA helicase rhlEchromosome CDS2013921 1362 - 0.5837
rho SPA3757 transcription termination factor Rhochromosome CDS3903141 1260 + 0.525397
rnb SPA1175 exoribonuclease IIchromosome CDS1246061 1935 - 0.558656
rncS SPA0284 ribonuclease IIIchromosome CDS321160 681 + 0.524229
rnk SPA2118 nucleoside diphosphate kinase regulatorchromosome CDS2202738 411 + 0.581509
rnr SPA4185 ribonuclease Rchromosome CDS4360894 2439 + 0.550636
rob SPA4396 right origin-binding proteinchromosome CDS4570468 870 - 0.534483
rof SPA0244 ROF proteinchromosome CDS284191 255 - 0.435294
rpoA SPA3281 DNA-directed RNA polymerase alpha subunitchromosome CDS3389688 990 - 0.521212
rpoB SPA3991 DNA-directed RNA polymerase beta subunitchromosome CDS4139533 4029 + 0.54207
rpoC SPA3992 DNA-directed RNA polymerase beta' subunitchromosome CDS4143638 4224 + 0.545928
rpoD SPA3079 RNA polymerase sigma factorchromosome CDS3186724 1983 + 0.529501
rpoE SPA0278 RNA polymerase sigma-70 factorchromosome CDS315155 576 + 0.508681
rpoH SPA3419 RNA polymerase sigma factorchromosome CDS3526756 855 - 0.539181
rpoN SPA3187 DNA-directed RNA polymerase subunit Nchromosome CDS3291877 1434 + 0.541144
rpoS SPA2780 RNA polymerase sigma factorchromosome CDS2878452 993 - 0.522659
rpoZ SPA3593 DNA-directed RNA polymerase omega subunitchromosome CDS3722435 276 + 0.536232
rsD SPA4002 putative regulatory proteinchromosome CDS4155056 489 - 0.498978
rstA SPA1380 putative two-component response regulatorchromosome CDS1460256 732 + 0.532787
sdiA SPA0919 cell-division regulatory proteinchromosome CDS997841 723 + 0.488243
sefR SPA4307 fimbrial regulatorchromosome CDS4476999 645 - 0.289922
sgcR SPA1251 putative regulatory proteinchromosome CDS1323607 792 - 0.520202
sinR SPA2459 LysR-family transcriptional regulator SinRchromosome CDS2556212 945 - 0.395767
sirA SPA0922 response regulatorchromosome CDS999318 657 + 0.512938
slmA SPA3584 nucleoid occlusion proteinchromosome CDS3713944 597 + 0.519263
slyA SPA1409 transcriptional regulator SlyAchromosome CDS1491977 435 - 0.491954
sopD SPA2801 possible secreted proteinchromosome CDS2899311 954 + 0.412998
soxR SPA4082 SoxR proteinchromosome CDS4256304 459 + 0.546841
soxS SPA4081 regulatory protein SoxSchromosome CDS4255894 324 - 0.512346
spoT SPA3594 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; CG Site No. 156chromosome CDS3722729 2112 + 0.535985
sprA SPA2725 possible AraC-family transcriptional regulatorchromosome CDS2826642 888 - 0.365991
sprB SPA2724 possible AraC-family transcriptional regulatorchromosome CDS2825502 756 - 0.448413
srlM SPA2694 glucitol operon activator proteinchromosome CDS2796503 360 + 0.55
srlR SPA2695 glucitol operon repressorchromosome CDS2797060 774 + 0.498708
srmB SPA0275 ATP-dependent RNA helicase SrmBchromosome CDS310922 1335 - 0.54382
ssrB SPA1462 putative two-component response regulatorchromosome CDS1535492 639 + 0.399061
tctD SPA2641 transcriptional regulatorchromosome CDS2749588 675 - 0.557037
tdcA SPA3114 TDC operon transcriptional activatorchromosome CDS3222919 939 - 0.445154
tinR SPA2451 transcriptional regulatorchromosome CDS2548252 456 - 0.320175
torR SPA3674 response regulator in multi-component regualtory system wtih TorS (sensory kinase) and TorT (periplasmic sensor), regulates tor operon (TorR family)chromosome CDS3812730 693 + 0.564214
treR SPA4256 trehalose repressorchromosome CDS4428431 948 - 0.555907
trpR SPA4393 Trp operon repressorchromosome CDS4568832 327 + 0.550459
tyrR SPA1201 transcriptional regulatory protein TyrRchromosome CDS1269051 1542 + 0.536965
uhpA SPA3640 two-component system response regulator proteinchromosome CDS3778685 591 - 0.585448
umuD SPA0872 UmuD proteinchromosome CDS957384 420 + 0.5
uxuR SPA4326 uxu operon transcriptional regulatorchromosome CDS4501003 774 + 0.549096
xylR SPA3513 xylose operon regulatory proteinchromosome CDS3636058 1179 + 0.528414
yaeG SPA0216 hypothetical proteinchromosome CDS250344 1158 + 0.555268
yafC SPA2513 hypothetical transcriptional regulatorchromosome CDS2612219 915 + 0.511475
yafP SPA3505 putative acetyltransferasechromosome CDS3626294 468 - 0.416667
yajF SPA2330 hypothetical ROK-family proteinchromosome CDS2428170 909 - 0.577558
ybaD SPA2308 hypothetical proteinchromosome CDS2403210 450 - 0.495556
ybaO SPA2263 hypothetical transcriptional regulatorchromosome CDS2356382 459 - 0.522876
ybbS SPA2208 hypothetical lysR-family transcriptional regulatorchromosome CDS2297469 927 + 0.529666
ybdM SPA2130 hypothetical proteinchromosome CDS2215823 618 + 0.501618
ybdO SPA2128 putative lysR-family transcriptional regulatorchromosome CDS2213547 903 + 0.389812
ybeF SPA2100 lysR-family transcriptional regulatorchromosome CDS2185464 954 + 0.506289
ybiH SPA1934 hypothetical tetR-family transcriptional regulatorchromosome CDS2015512 675 + 0.527407
yccR SPA1778 hypothetical proteinchromosome CDS1834618 606 - 0.50165
ycdC SPA1729 putative transcriptional regulatorchromosome CDS1791178 639 - 0.544601
ycfQ SPA1638 putative TetR-family regulatory proteinchromosome CDS1703006 636 + 0.537736
ycfX SPA1630 putative ROK-family proteinchromosome CDS1692735 912 - 0.563596
yciT SPA1172 putative regulatory proteinchromosome CDS1242677 753 - 0.498008
ydcR SPA1270 putative regulatory proteinchromosome CDS1340413 1425 + 0.531228
ydeW SPA3916 putative regulatory proteinchromosome CDS4060332 960 - 0.503125
ydfH SPA1345 putative regulatory proteinchromosome CDS1426142 687 + 0.50655
ydhB SPA1424 putative transcriptional regulatorchromosome CDS1504375 933 - 0.566988
ydhM SPA1416 putative TetR-family transcriptional regulatorchromosome CDS1497616 600 + 0.555
ydiZ SPA1519 hypothetical proteinchromosome CDS1593847 291 + 0.484536
yeaM SPA1565 putative transcriptional regulatorchromosome CDS1641880 795 - 0.550943
yeeY SPA0802 putative transcriptional regulatorchromosome CDS897235 915 + 0.52459
yegW SPA0707 putative GntR-family transcriptional regulatorchromosome CDS790861 747 + 0.534137
yehT SPA0693 putative two-component system response regulatorchromosome CDS776809 720 + 0.508333
yehV SPA0691 putative transcriptional regulatorchromosome CDS774173 732 - 0.540984
yeiE SPA0650 putative transcriptional regulatorchromosome CDS729851 864 + 0.549769
yejH SPA0627 putative helicasechromosome CDS704812 1761 - 0.567859
yfaX SPA0571 putative transcriptional regulatorchromosome CDS645076 783 + 0.514687
yfeG SPA0414 ethanolamine operon transcriptional regulatorchromosome CDS484763 1053 + 0.539411
yfeR SPA0441 putative transcriptional regulatorchromosome CDS509930 927 + 0.565264
yfhH SPA0293 putative transcriptional regulatorchromosome CDS328229 849 - 0.567727
yfhP SPA0322 hypothetical proteinchromosome CDS363257 495 + 0.557576
yfiE SPA0274 putative transcriptional regulator, LysR familychromosome CDS309960 945 + 0.50582
ygaA SPA2697 anaerobic nitric oxide reductase transcription regulatorchromosome CDS2798788 1509 - 0.599072
ygaE SPA2651 putative transcriptional regulatorchromosome CDS2760279 678 + 0.566372
ygbI SPA2776 DeoR-family trancriptional regulatorchromosome CDS2874781 765 + 0.559477
ygiX SPA3046 probable two-component system response regulator.chromosome CDS3151378 660 + 0.560606
ygjM SPA3871 hypothetical proteinchromosome CDS4017700 447 - 0.469799
yhaJ SPA3104 possible LysR-family transcriptional regulatorchromosome CDS3210466 897 - 0.568562
yhcK SPA3208 transcriptional regulator NanRchromosome CDS3316609 792 - 0.525253
yhcS SPA3234 probable LysR-family transcriptional regulatorchromosome CDS3339817 930 + 0.532258
yhgF SPA3369 putative transcription accessory proteinchromosome CDS3466837 2331 + 0.583441
yhhK SPA3416 hypothetical proteinchromosome CDS3524754 384 + 0.541667
yhhY SPA3398 putative acetyltransferasechromosome CDS3506736 489 + 0.543967
yhjB SPA3462 hypothetical luxR-family transcriptional regulatorchromosome CDS3572890 603 - 0.47927
yiaC SPA3495 putative acetyltransferasechromosome CDS3617538 441 + 0.517007
yiaJ SPA3518 putative transcriptional regulatorchromosome CDS3642515 801 - 0.524345
yidZ SPA3689 putative LysR-family transcriptional regulatorchromosome CDS3832924 903 + 0.55371
yieP SPA3727 hypothetical 20.8 kDa protein in rbsr-rrsc intergenic regionchromosome CDS3873969 705 - 0.510638
yifA SPA3735 transcriptional regulator HdfRchromosome CDS3880485 837 - 0.514934
yihW SPA3866 putative DeoR-family transcriptional regulatorchromosome CDS4013810 804 + 0.544776
yiiD SPA3870 putative acetyltransferasechromosome CDS4016696 990 + 0.540404
yiiF SPA3874 putative CopG-family DNA-binding proteinchromosome CDS4019673 243 + 0.489712
yijC SPA3965 possible TetR-family trancriptional regulatory proteinchromosome CDS4119332 633 + 0.554502
yijO SPA3955 putative AraC-family transcriptional regulatorchromosome CDS4106062 837 - 0.55914
yjaB SPA4019 putative acetyltransferasechromosome CDS4172329 438 - 0.484018
yjdC SPA4138 putative transcriptional regulatorchromosome CDS4316509 576 - 0.513889
yjeB SPA4184 hypothetical proteinchromosome CDS4360431 426 + 0.488263
yjfJ SPA4188 putative Phage shock protein A, IM30, suppresses sigma54-dependent transcriptionchromosome CDS4364705 699 + 0.539342
yjfQ SPA4198 probable transcriptional regulatorchromosome CDS4371976 756 - 0.539683
yjgM SPA4274 putative acetyltransferasechromosome CDS4445059 516 - 0.527132
yjiE SPA4331 probable transcriptional activatorchromosome CDS4505017 909 - 0.524752
yjjQ SPA4361 conserved hypothetical regulatory proteinchromosome CDS4538686 726 + 0.438017
ykgD SPA2164 hypothetical araC-family transcriptional regulatorchromosome CDS2254783 855 + 0.589474
yncC SPA1280 putative regulatory proteinchromosome CDS1353475 666 + 0.468468
yneJ SPA1332 putative regulatory proteinchromosome CDS1415827 873 + 0.569301
ynfL SPA1367 putative regulatory proteinchromosome CDS1447303 900 - 0.568889
yoaA SPA1052 putative ATP-dependent helicasechromosome CDS1121708 1911 + 0.562009
yqgE SPA2959 hypothetical proteinchromosome CDS3067461 564 + 0.521277
yqhC SPA3031 probable AraC-family trancriptional regulatory proteinchromosome CDS3131805 918 - 0.510893
yrbA SPA3175 hypothetical proteinchromosome CDS3283675 294 - 0.496599
ytfH SPA4221 hypothetical proteinchromosome CDS4390975 387 + 0.565891
zntR SPA3278 zinc-responsive transcriptional regulatorchromosome CDS3388352 426 - 0.502347