Gene list
Applied filters:
COG category: Transcription
Organism: Shigella flexneri 2a str. 301, 301
Number of genes found: 271
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella flexneri 2a str. 301, 301 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SF3508 | hypothetical protein | chromosome | CDS | 3601057 | 765 | - | 0.355556 |
NA | SF1420 | putative enzyme | chromosome | CDS | 1457052 | 1911 | + | 0.549451 |
NA | SF1288 | putative DEOR-type transcriptional regulator | chromosome | CDS | 1337881 | 750 | - | 0.497333 |
NA | SF1537 | putative ARAC-type regulatory protein | chromosome | CDS | 1569506 | 762 | - | 0.395013 |
NA | SF2695 | hypothetical protein | chromosome | CDS | 2771106 | 300 | + | 0.53 |
NA | SF2447 | putative 2-component transcriptional regulator | chromosome | CDS | 2503224 | 735 | + | 0.47483 |
NA | SF0466 | hypothetical protein | chromosome | CDS | 479460 | 294 | - | 0.404762 |
NA | SF4216 | putative deoR family transcriptional regulator | chromosome | CDS | 4389863 | 696 | + | 0.45977 |
NA | CP0100 | hypothetical protein | pCP301 | CDS | 83645 | 474 | - | 0.350211 |
NA | SF1676 | hypothetical protein | chromosome | CDS | 1704125 | 600 | + | 0.52 |
NA | SF4233 | hypothetical protein | chromosome | CDS | 4408032 | 504 | + | 0.515873 |
NA | SF1506 | hypothetical protein | chromosome | CDS | 1539110 | 291 | - | 0.436426 |
NA | SF3009 | hypothetical protein | chromosome | CDS | 3104056 | 606 | - | 0.415842 |
NA | SF3509 | hypothetical protein | chromosome | CDS | 3602067 | 762 | + | 0.372703 |
NA | SF1453 | putative DEOR-type transcriptional regulator | chromosome | CDS | 1487898 | 759 | + | 0.424242 |
NA | CP0217 | hypothetical protein | pCP301 | CDS | 177513 | 285 | + | 0.54386 |
NA | SF2578 | hypothetical protein | chromosome | CDS | 2646678 | 489 | - | 0.537832 |
NA | SF2763 | putative transcriptional regulator | chromosome | CDS | 2838169 | 408 | + | 0.512255 |
NA | SF2760 | putative regulatory protein | chromosome | CDS | 2835646 | 564 | + | 0.429078 |
NA | SF2431 | sucrose specific repressor | chromosome | CDS | 2480823 | 1059 | - | 0.516525 |
NA | SF1949 | hypothetical protein | chromosome | CDS | 1983687 | 381 | + | 0.475066 |
NA | CP0109 | hypothetical protein | pCP301 | CDS | 90030 | 486 | - | 0.436214 |
NA | SF2981 | hypothetical protein | chromosome | CDS | 3076205 | 384 | - | 0.552083 |
NA | CP0059 | hypothetical protein | pCP301 | CDS | 44783 | 483 | - | 0.457557 |
NA | SF0876 | similar to DicA, regulator of DicB encoded by prophage | chromosome | CDS | 910310 | 408 | + | 0.45098 |
NA | SF1204 | putative sensor-type regulator | chromosome | CDS | 1247863 | 1929 | + | 0.513738 |
NA | SF2987 | hypothetical protein | chromosome | CDS | 3082708 | 207 | + | 0.536232 |
NA | SF1398 | putative regulator | chromosome | CDS | 1439422 | 792 | + | 0.496212 |
NA | SF2759 | putative DNA-binding protein | chromosome | CDS | 2835230 | 252 | - | 0.492063 |
NA | SF1765 | hypothetical protein | chromosome | CDS | 1804336 | 723 | - | 0.437068 |
NA | SF2535 | similar to formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons | chromosome | CDS | 2600007 | 1833 | + | 0.521549 |
NA | SF1834 | hypothetical protein | chromosome | CDS | 1874092 | 387 | + | 0.436693 |
NA | SF2764 | RNA polymerase sigma factor | chromosome | CDS | 2838696 | 1029 | - | 0.517979 |
NA | SF0871 | putative bacteriophage protein | chromosome | CDS | 907561 | 423 | - | 0.513002 |
NA | SF4417 | hypothetical protein | chromosome | CDS | 4588413 | 264 | - | 0.416667 |
NA | SF0367 | hypothetical protein | chromosome | CDS | 379439 | 240 | - | 0.45 |
NA | SF0767 | putative toxin | chromosome | CDS | 797244 | 468 | + | 0.538462 |
NA | SF1345 | putative bacteriophage protein | chromosome | CDS | 1394857 | 423 | + | 0.510638 |
NA | SF1978 | putative regulator | chromosome | CDS | 2010526 | 738 | - | 0.371274 |
NA | SF0687 | putative bacteriophage protein | chromosome | CDS | 719740 | 258 | + | 0.5 |
NA | SF0522 | similar to lysR-family transcriptional regulator | chromosome | CDS | 542562 | 903 | - | 0.386489 |
NA | SF1788 | putative LYSR-type transcriptional regulator | chromosome | CDS | 1824733 | 1065 | + | 0.479812 |
acrR | SF0409 | acrAB operon repressor | chromosome | CDS | 422292 | 648 | + | 0.453704 |
adiY | SF4107 | putative ARAC-type regulatory protein | chromosome | CDS | 4270628 | 762 | + | 0.413386 |
agaR | SF3166 | putative DEOR-type transcriptional regulator of aga operon | chromosome | CDS | 3268399 | 825 | - | 0.522424 |
araC | SF0059 | transcriptional regulator for ara operon | chromosome | CDS | 68229 | 879 | + | 0.526735 |
arcA | SF4433 | negative response regulator of genes in aerobic pathways (sensors, ArcB and CpxA) | chromosome | CDS | 4605141 | 717 | - | 0.51046 |
argR | SF3277 | arginine repressor | chromosome | CDS | 3372555 | 471 | + | 0.488323 |
ascG | SF2737 | ascBF operon repressor | chromosome | CDS | 2811927 | 1011 | - | 0.526212 |
asnC | SF3823 | regulator for asnA, asnC and gidA | chromosome | CDS | 3933813 | 459 | - | 0.492375 |
baeR | SF2144 | transcriptional response regulatory protein (sensor BaeS) | chromosome | CDS | 2171058 | 723 | + | 0.538036 |
basR | SF4110 | transcriptional regulatory protein, | chromosome | CDS | 4274607 | 669 | + | 0.532138 |
bglG | SF3732 | positive regulation of bgl operon | chromosome | CDS | 3841322 | 822 | + | 0.425791 |
bglJ | SF4399 | 2-component transcriptional regulator | chromosome | CDS | 4571170 | 528 | + | 0.464015 |
cbl | SF2056 | transcriptional regulator cys regulon | chromosome | CDS | 2077303 | 951 | - | 0.474238 |
cobB | SF1124 | NAD-dependent deacetylase | chromosome | CDS | 1167261 | 822 | + | 0.508516 |
cpxR | SF3991 | transcriptional regulator in 2-component system | chromosome | CDS | 4119956 | 699 | - | 0.51216 |
creB | SF4430 | catabolic regulation response regulator | chromosome | CDS | 4601559 | 690 | + | 0.549275 |
csgD | SF1034 | probable csgAB operon transcriptional regulatory protein | chromosome | CDS | 1078707 | 651 | - | 0.414747 |
csiE | SF2582 | hypothetical protein | chromosome | CDS | 2650288 | 1281 | + | 0.514442 |
cspA | SF3589 | cold shock protein 7.4, transcriptional activator of hns | chromosome | CDS | 3691114 | 213 | + | 0.483568 |
cspC | SF1403 | cold shock protein | chromosome | CDS | 1442085 | 210 | + | 0.466667 |
cspD | SF0840 | cold shock protein | chromosome | CDS | 873679 | 225 | - | 0.484444 |
cspE | SF0657 | cold shock protein E | chromosome | CDS | 693021 | 210 | - | 0.438095 |
cspG | SF0991 | putative cold shock protein | chromosome | CDS | 1039108 | 201 | + | 0.457711 |
cspH | SF0990 | cold shock-like protein | chromosome | CDS | 1038598 | 213 | - | 0.478873 |
cysB | SF1277 | transcriptional regulator for cysteine regulon | chromosome | CDS | 1328139 | 975 | + | 0.489231 |
cytR | SF4012 | regulator for deo operon, udp, cdd, tsx, nupC, and nupG | chromosome | CDS | 4138509 | 1026 | - | 0.515595 |
dbpA | SF1826 | ATP-dependent RNA helicase | chromosome | CDS | 1864246 | 1368 | - | 0.516082 |
deaD | SF3203 | inducible ATP-independent RNA helicase | chromosome | CDS | 3298178 | 1941 | - | 0.555384 |
deoR | SF0793 | Deoxyribose operon repressor | chromosome | CDS | 827399 | 759 | - | 0.503294 |
dinG | SF0748 | probable ATP-dependent helicase | chromosome | CDS | 775695 | 2151 | + | 0.538819 |
ebgR | SF3115 | regulator of ebg operon | chromosome | CDS | 3211909 | 984 | + | 0.513211 |
emrR | SF2711 | regulator of plasmid mcrB operon (microcin B17 synthesis) | chromosome | CDS | 2784767 | 432 | + | 0.497685 |
envY | SF0467 | envelope protein | chromosome | CDS | 480055 | 762 | - | 0.454068 |
evgA | SF2436 | putative positive transcription regulator (sensor EvgS) | chromosome | CDS | 2486818 | 615 | + | 0.406504 |
exuR | SF3137 | negative regulator of exu regulon, exuT, uxaAC, and uxuB | chromosome | CDS | 3238630 | 777 | + | 0.498069 |
fadR | SF1176 | fatty acid metabolism regulator | chromosome | CDS | 1218629 | 720 | + | 0.515278 |
farR | SF0567 | transcriptional regulator of succinyl CoA synthetase operon | chromosome | CDS | 591360 | 723 | + | 0.471646 |
fhlA | SF2748 | formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons | chromosome | CDS | 2822687 | 2079 | + | 0.525253 |
fis | SF3299 | DNA-binding protein Fis | chromosome | CDS | 3398843 | 297 | + | 0.47138 |
flgM | SF1077 | flagellar protein FlgM | chromosome | CDS | 1117596 | 294 | - | 0.530612 |
fruR | SF0075 | transcriptional repressor of fru operon and others | chromosome | CDS | 85869 | 1005 | + | 0.549254 |
fucR | SF2819 | positive regulator of the fuc operon | chromosome | CDS | 2899803 | 732 | + | 0.48224 |
galR | SF2847 | repressor of galETK operon | chromosome | CDS | 2936960 | 1032 | + | 0.521318 |
galS | SF2236 | mgl repressor, galactose operon inducer | chromosome | CDS | 2263188 | 1041 | - | 0.524496 |
gatR | SF2150 | galactitol utilization operon repressor | chromosome | CDS | 2175857 | 780 | - | 0.466667 |
gcvA | SF2822 | positive regulator of gcv operon | chromosome | CDS | 2902085 | 918 | - | 0.491285 |
glcC | SF3019 | transcriptional activator for glc operon | chromosome | CDS | 3116277 | 771 | + | 0.547341 |
glpR | SF3445 | repressor of the glp operon | chromosome | CDS | 3531059 | 759 | - | 0.549407 |
gntR | SF3460 | regulator of gluconate (gnt) operon | chromosome | CDS | 3550379 | 939 | - | 0.549521 |
greA | SF3221 | transcription elongation factor GreA | chromosome | CDS | 3320422 | 477 | - | 0.486373 |
greB | SF3425 | transcription elongation factor GreB | chromosome | CDS | 3506063 | 513 | + | 0.493177 |
gutM | SF2729 | glucitol operon activator | chromosome | CDS | 2802294 | 360 | + | 0.544444 |
hcaR | SF2584 | transcriptional activator of hca cluster | chromosome | CDS | 2652859 | 891 | - | 0.499439 |
hepA | SF0054 | ATP-dependent helicase HepA | chromosome | CDS | 58286 | 2907 | - | 0.54902 |
hpaA | SF4377 | putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein | chromosome | CDS | 4549151 | 891 | - | 0.461279 |
hpcR | SF4385 | regulator of the 4HPA-hydroxylase operon | chromosome | CDS | 4557380 | 447 | + | 0.505593 |
hypB | SF2744 | guanine-nucleotide binding protein | chromosome | CDS | 2819350 | 873 | + | 0.553265 |
iciA | SF2901 | chromosome replication initiation inhibitor protein | chromosome | CDS | 2994014 | 894 | + | 0.540268 |
iclR | SF4084 | repressor of aceBA operon | chromosome | CDS | 4240358 | 864 | - | 0.538194 |
ilvY | SF3849 | ilvC positive regulator | chromosome | CDS | 3966315 | 891 | - | 0.575758 |
leuO | SF0071 | leucine transcriptional activator | chromosome | CDS | 82032 | 1122 | + | 0.437611 |
lexA | SF4162 | LexA repressor | chromosome | CDS | 4332059 | 609 | - | 0.52381 |
lldR | SF3643 | transcriptional regulator | chromosome | CDS | 3751652 | 777 | + | 0.541828 |
lrhA | SF2365 | LysR family NADH dehydrogenase transcriptional regulator | chromosome | CDS | 2413817 | 939 | - | 0.498403 |
lrp | SF0848 | regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | chromosome | CDS | 883966 | 495 | + | 0.472727 |
lysR | SF2849 | positive regulator for lysine | chromosome | CDS | 2939382 | 936 | + | 0.530983 |
malI | SF1646 | repressor of malXY | chromosome | CDS | 1674868 | 1029 | - | 0.544218 |
marA | SF1563 | transcriptional activator of defense systems | chromosome | CDS | 1595773 | 384 | - | 0.458333 |
marR | SF1564 | multiple antibiotic resistance protein, repressor of mar operon | chromosome | CDS | 1596176 | 378 | - | 0.497355 |
melR | SF4105 | regulator of melibiose operon | chromosome | CDS | 4266929 | 909 | + | 0.49835 |
metJ | SF4016 | transcriptional repressor protein MetJ | chromosome | CDS | 4143156 | 318 | - | 0.518868 |
metR | SF3906 | regulator for metE and metH | chromosome | CDS | 4025005 | 954 | - | 0.562893 |
mfd | SF1118 | transcription-repair coupling factor | chromosome | CDS | 1158259 | 3447 | - | 0.548883 |
mlc | SF1615 | putative NAGC-like transcriptional regulator | chromosome | CDS | 1641973 | 1221 | - | 0.521704 |
mtlR | SF3635 | repressor for mtl | chromosome | CDS | 3741466 | 588 | + | 0.510204 |
mxiE | CP0144 | MxiE, similarities to transcriptional activators of the AraC family, function unknown | pCP301 | CDS | 123331 | 633 | + | 0.327014 |
nac | SF2057 | nitrogen assimilation control protein | chromosome | CDS | 2078355 | 918 | - | 0.48366 |
nagC | SF0617 | transcriptional repressor of nag (N-acetylglucosamine) operon | chromosome | CDS | 650241 | 1221 | + | 0.529075 |
narL | SF1224 | nitrate/nitrite response regulator protein NarL | chromosome | CDS | 1270991 | 651 | - | 0.516129 |
narP | SF2277 | nitrate/nitrite response regulator (sensor NarQ) | chromosome | CDS | 2312501 | 648 | + | 0.523148 |
nhaR | SF0017 | transcriptional activator of nhaA | chromosome | CDS | 17372 | 900 | + | 0.474444 |
nlp | SF3228 | regulatory factor of maltose metabolism | chromosome | CDS | 3327090 | 279 | + | 0.494624 |
nrfB | SF4131 | formate-dependent nitrite reductase | chromosome | CDS | 4299835 | 567 | + | 0.536155 |
nusA | SF3210 | transcription elongation factor NusA | chromosome | CDS | 3308222 | 1488 | - | 0.526882 |
nusB | SF0353 | transcription antitermination protein NusB | chromosome | CDS | 364634 | 420 | + | 0.540476 |
nusG | SF4055 | transcription antitermination protein NusG | chromosome | CDS | 4197496 | 546 | + | 0.514652 |
ompR | SF3424 | osmolarity response regulator | chromosome | CDS | 3505152 | 720 | - | 0.547222 |
oxyR | SF4043 | activator of hydrogen peroxide-inducible genes OxyR | chromosome | CDS | 4178512 | 918 | + | 0.54902 |
parB | CP0032 | plasmid segregation protein | pCP301 | CDS | 28154 | 981 | + | 0.423038 |
pdhR | SF0110 | transcriptional regulator of pyruvate dehydrogenase complex | chromosome | CDS | 120356 | 765 | + | 0.55817 |
phoB | SF0336 | positive response regulator for pho regulon | chromosome | CDS | 346650 | 690 | + | 0.53913 |
phoP | SF1149 | transcriptional regulatory protein | chromosome | CDS | 1190960 | 672 | - | 0.480655 |
pspA | SF1309 | phage shock protein, inner membrane protein | chromosome | CDS | 1362226 | 669 | + | 0.491779 |
pspC | SF1311 | putative regulator of phage shock response | chromosome | CDS | 1363172 | 360 | + | 0.502778 |
pspF | SF1308 | psp operon transcriptional activator | chromosome | CDS | 1361082 | 993 | - | 0.520644 |
purR | SF1686 | transcriptional repressor for pur regulon, glyA, glnB, prsA, speA | chromosome | CDS | 1717533 | 936 | + | 0.544872 |
rbsR | SF3836 | regulator for rbs operon | chromosome | CDS | 3947717 | 984 | + | 0.504065 |
rcsA | SF1996 | positive regulator for ctr capsule biosynthesis, positive transcription factor | chromosome | CDS | 2023835 | 624 | + | 0.383013 |
rcsB | SF2301 | positive response regulator for colanic capsule biosynthesis, (sensor, RcsC) | chromosome | CDS | 2337580 | 651 | + | 0.477727 |
recG | SF3692 | DNA helicase | chromosome | CDS | 3795526 | 2082 | + | 0.570125 |
relA | SF2797 | (p)ppGpp synthetase I (GTP pyrophosphokinase) | chromosome | CDS | 2870403 | 2235 | - | 0.53736 |
rfaH | SF3918 | transcriptional activator RfaH | chromosome | CDS | 4037473 | 489 | - | 0.498978 |
rhaR | SF3983 | positive regulator for rhaRS operon | chromosome | CDS | 4112204 | 939 | + | 0.498403 |
rhaS | SF3982 | positive regulator for rhaBAD operon | chromosome | CDS | 4111384 | 837 | + | 0.517324 |
rhlB | SF3853 | ATP-dependent RNA helicase | chromosome | CDS | 3972930 | 1266 | - | 0.524487 |
rhlE | SF0747 | putative ATP-dependent RNA helicase | chromosome | CDS | 773699 | 1221 | + | 0.553645 |
rho | SF3856 | transcription termination factor Rho | chromosome | CDS | 3974982 | 1260 | + | 0.502381 |
rnb | SF1291 | exoribonuclease II | chromosome | CDS | 1341250 | 1935 | - | 0.531783 |
rncS | SF2629 | ribonuclease III | chromosome | CDS | 2700598 | 681 | - | 0.508076 |
rnk | SF0528 | nucleoside diphosphate kinase regulator | chromosome | CDS | 549404 | 411 | - | 0.547445 |
rob | SF4428 | right origin-binding protein | chromosome | CDS | 4599993 | 870 | - | 0.531034 |
rpoA | SF3327 | DNA-directed RNA polymerase alpha subunit | chromosome | CDS | 3424424 | 990 | - | 0.521212 |
rpoB | SF4060 | DNA-directed RNA polymerase beta subunit | chromosome | CDS | 4200999 | 4029 | + | 0.525441 |
rpoC | SF4061 | DNA-directed RNA polymerase beta' subunit | chromosome | CDS | 4205104 | 4224 | + | 0.539062 |
rpoD | SF3108 | RNA polymerase sigma factor | chromosome | CDS | 3202085 | 1842 | + | 0.529316 |
rpoE | SF2635 | RNA polymerase sigma-70 factor | chromosome | CDS | 2706652 | 576 | - | 0.489583 |
rpoH | SF3479 | RNA polymerase sigma factor | chromosome | CDS | 3570448 | 855 | - | 0.540351 |
rpoN | SF3242 | DNA-directed RNA polymerase subunit N | chromosome | CDS | 3336886 | 1434 | + | 0.529986 |
rpoZ | SF3689 | DNA-directed RNA polymerase omega subunit | chromosome | CDS | 3792422 | 276 | + | 0.532609 |
rstA | SF1629 | response transcriptional regulatory protein (RstB sensor) | chromosome | CDS | 1656796 | 744 | + | 0.485215 |
rtcR | SF3444 | putative 2-component regulator | chromosome | CDS | 3529479 | 1599 | + | 0.553471 |
sdiA | SF1959 | transcriptional regulator of ftsQAZ gene cluster | chromosome | CDS | 1992352 | 627 | - | 0.470494 |
slmA | SF3680 | nucleoid occlusion protein | chromosome | CDS | 3784766 | 639 | + | 0.528951 |
slyA | SF1669 | transcriptional regulator SlyA | chromosome | CDS | 1698492 | 441 | - | 0.47619 |
sorC | SF4094 | probable sor-operon regulator | chromosome | CDS | 4252808 | 948 | - | 0.494726 |
soxR | SF4123 | redox-sensing activator of soxS | chromosome | CDS | 4287900 | 465 | + | 0.52043 |
soxS | SF4122 | regulation of superoxide response regulon | chromosome | CDS | 4287491 | 324 | - | 0.518519 |
spoT | SF3690 | (p)ppGpp synthetase II and guanosine-3,5-bis pyrophosphate 3-pyrophosphohydrolase | chromosome | CDS | 3792716 | 2109 | + | 0.537696 |
srlR | SF2730 | regulator for gut (srl), glucitol operon | chromosome | CDS | 2802720 | 774 | + | 0.48708 |
srmB | SF2638 | ATP-dependent RNA helicase | chromosome | CDS | 2710111 | 1335 | + | 0.549064 |
tdcA | SF3158 | transcriptional activator of tdc operon | chromosome | CDS | 3257633 | 939 | - | 0.421725 |
torR | SF0998 | TorCAD response regulator | chromosome | CDS | 1044894 | 693 | - | 0.526696 |
treR | SF4249 | trehalose repressor | chromosome | CDS | 4419872 | 948 | + | 0.537975 |
trpR | SF4425 | Trp operon repressor | chromosome | CDS | 4598366 | 327 | + | 0.535168 |
tyrR | SF1329 | regulatory protein TyrR | chromosome | CDS | 1381601 | 1542 | + | 0.520104 |
uhpA | SF3792 | response regulator | chromosome | CDS | 3900704 | 591 | + | 0.590525 |
uidR | SF1641 | repressor for uid operon | chromosome | CDS | 1672393 | 591 | - | 0.502538 |
umuD | SF1172 | mutagenesis and repair protein | chromosome | CDS | 1214458 | 420 | + | 0.478571 |
uvrY | SF1957 | response regulator | chromosome | CDS | 1990986 | 657 | - | 0.490107 |
uxuR | SF4196 | regulator for uxu operon | chromosome | CDS | 4369086 | 774 | - | 0.533592 |
vacB | SF4334 | putative enzyme | chromosome | CDS | 4511431 | 2484 | + | 0.549919 |
virB | CP0123 | VirB, transcriptional activator required for tanscription of the ipa, mxi, and spa operons | pCP301 | CDS | 105792 | 930 | - | 0.339785 |
virF | CP0046 | VirF, member of the AraC family of transcriptional activators, required for transcription of virB and icsA | pCP301 | CDS | 36449 | 789 | - | 0.304182 |
waaP | SF3667 | lipopolysaccharide core biosynthesis protein | chromosome | CDS | 3774656 | 807 | - | 0.478315 |
waaY | SF3665 | putative LPS biosynthesis protein | chromosome | CDS | 3772873 | 708 | - | 0.305085 |
yaeO | SF0179 | hypothetical protein | chromosome | CDS | 204622 | 261 | - | 0.463602 |
yafC | SF0194 | putative transcriptional regulator LYSR-type | chromosome | CDS | 222660 | 915 | - | 0.492896 |
yafP | SF0282 | hypothetical protein | chromosome | CDS | 300114 | 453 | + | 0.428256 |
yaiV | SF0238 | hypothetical protein | chromosome | CDS | 261228 | 549 | - | 0.398907 |
yajF | SF0330 | possible NAGC-like transcriptional regulator | chromosome | CDS | 339622 | 1047 | + | 0.538682 |
ybaD | SF0350 | hypothetical protein | chromosome | CDS | 362499 | 450 | + | 0.506667 |
ybaO | SF0392 | putative LRP-like transcriptional regulator | chromosome | CDS | 403389 | 546 | + | 0.5 |
ybbI | SF0432 | putative transcriptional regulator | chromosome | CDS | 450313 | 408 | + | 0.585784 |
ybbS | SF0443 | putative transcriptional regulator LYSR-type | chromosome | CDS | 461026 | 927 | - | 0.516721 |
ybbU | SF0445 | putative regulator | chromosome | CDS | 462742 | 816 | + | 0.528186 |
ybeF | SF0652 | lysR-family transcriptional regulator | chromosome | CDS | 689296 | 801 | + | 0.469413 |
ybiH | SF0746 | putative transcriptional regulator | chromosome | CDS | 772799 | 684 | - | 0.542398 |
ycdC | SF1016 | putative tet operon regulator | chromosome | CDS | 1062302 | 639 | + | 0.511737 |
ycfQ | SF1115 | hypothetical protein | chromosome | CDS | 1155942 | 711 | - | 0.496484 |
ycfX | SF1123 | putative NAGC-like transcriptional regulator | chromosome | CDS | 1166334 | 912 | + | 0.524123 |
ycjC | SF1304 | hypothetical protein | chromosome | CDS | 1356183 | 558 | + | 0.510753 |
ycjW | SF1326 | putative LACI-type transcriptional regulator | chromosome | CDS | 1377844 | 999 | - | 0.454454 |
ydeW | SF1582 | putative sorC family transcriptional regulator | chromosome | CDS | 1612684 | 954 | - | 0.51153 |
ydfH | SF1555 | hypothetical protein | chromosome | CDS | 1586755 | 639 | - | 0.500782 |
ydhB | SF1687 | putative LYSR-type transcriptional regulator | chromosome | CDS | 1718584 | 942 | - | 0.537155 |
yebK | SF1863 | hypothetical protein | chromosome | CDS | 1900526 | 870 | + | 0.495402 |
yedW | SF2016 | putative 2-component transcriptional regulator | chromosome | CDS | 2040271 | 672 | - | 0.446429 |
yeeY | SF2074 | putative LYSR-type transcriptional regulator | chromosome | CDS | 2092845 | 984 | - | 0.498984 |
yehT | SF2197 | hypothetical protein | chromosome | CDS | 2223233 | 720 | - | 0.490278 |
yeiE | SF2242 | putative LYSR-type transcriptional regulator | chromosome | CDS | 2271217 | 882 | - | 0.535147 |
yejH | SF2271 | putative ATP-dependent helicase | chromosome | CDS | 2303836 | 1761 | + | 0.531516 |
yfaH | SF2320 | hypothetical protein | chromosome | CDS | 2366441 | 207 | + | 0.415459 |
yfeR | SF2464 | putative LYSR-type transcriptional regulator | chromosome | CDS | 2523231 | 927 | - | 0.537217 |
yfeT | SF2482 | hypothetical protein | chromosome | CDS | 2542114 | 1002 | - | 0.502994 |
yfhH | SF2608 | hypothetical protein | chromosome | CDS | 2683559 | 921 | + | 0.510315 |
yfiE | SF2639 | putative LYSR-type transcriptional regulator | chromosome | CDS | 2711480 | 927 | - | 0.481122 |
ygaA | SF2732 | anaerobic nitric oxide reductase transcription regulator | chromosome | CDS | 2804448 | 1590 | - | 0.556604 |
ygaE | SF2691 | putative transcriptional regulator | chromosome | CDS | 2768233 | 663 | + | 0.532428 |
ygbI | SF2754 | putative DEOR-type transcriptional regulator | chromosome | CDS | 2829589 | 798 | - | 0.511278 |
ygfI | SF2906 | putative LYSR-type transcriptional regulator | chromosome | CDS | 3000483 | 951 | - | 0.445846 |
yggD | SF2919 | putative transcriptional regulator | chromosome | CDS | 3011914 | 510 | - | 0.482353 |
ygiP | SF3101 | putative LYSR-type transcriptional regulator | chromosome | CDS | 3194362 | 1002 | - | 0.491018 |
ygiX | SF3066 | putative 2-component transcriptional regulator | chromosome | CDS | 3163039 | 660 | + | 0.513636 |
ygjM | SF3122 | hypothetical protein | chromosome | CDS | 3223965 | 417 | - | 0.484412 |
yhaJ | SF3147 | putative LYSR-type transcriptional regulator | chromosome | CDS | 3244746 | 897 | - | 0.557414 |
yhcI | SF3258 | N-acetylmannosamine kinase | chromosome | CDS | 3355571 | 909 | - | 0.575358 |
yhcK | SF3262 | transcriptional regulator NanR | chromosome | CDS | 3359795 | 783 | - | 0.521073 |
yhcO | SF3279 | hypothetical protein | chromosome | CDS | 3373709 | 273 | - | 0.428571 |
yhcS | SF3282 | putative LYSR-type transcriptional regulator | chromosome | CDS | 3377390 | 912 | + | 0.531798 |
yhfR | SF3393 | putative transcriptional regulator | chromosome | CDS | 3473205 | 798 | + | 0.502506 |
yhgF | SF3426 | hypothetical protein | chromosome | CDS | 3506771 | 2223 | + | 0.567701 |
yhhG | SF3499 | nickel responsive regulator | chromosome | CDS | 3589112 | 402 | + | 0.557214 |
yhhY | SF3463 | hypothetical protein | chromosome | CDS | 3553786 | 489 | + | 0.519427 |
yhiE | SF3546 | hypothetical protein | chromosome | CDS | 3635423 | 528 | + | 0.329545 |
yhiW | SF3596 | putative ARAC-type regulatory protein | chromosome | CDS | 3698490 | 729 | + | 0.421125 |
yhiX | SF3595 | putative ARAC-type regulatory protein | chromosome | CDS | 3697298 | 825 | + | 0.412121 |
yhjB | SF3552 | putative regulator | chromosome | CDS | 3641452 | 603 | - | 0.47927 |
yhjC | SF3553 | putative transcriptional regulator LYSR-type | chromosome | CDS | 3642502 | 972 | + | 0.521605 |
yiaC | SF3584 | hypothetical protein | chromosome | CDS | 3684716 | 441 | + | 0.521542 |
yiaJ | SF3618 | putative regulator | chromosome | CDS | 3723259 | 849 | - | 0.52179 |
yidL | SF3782 | putative ARAC-type regulatory protein | chromosome | CDS | 3891602 | 894 | - | 0.434004 |
yidP | SF3779 | putative transcriptional regulator | chromosome | CDS | 3888206 | 675 | - | 0.515556 |
yidW | SF3769 | regulator protein for dgo operon | chromosome | CDS | 3877596 | 690 | + | 0.553623 |
yieP | SF3838 | hypothetical protein | chromosome | CDS | 3950116 | 549 | - | 0.495446 |
yifA | SF3839 | transcriptional regulator HdfR | chromosome | CDS | 3956612 | 840 | - | 0.486905 |
yihL | SF3942 | putative transcriptional regulator | chromosome | CDS | 4073023 | 711 | + | 0.489451 |
yihW | SF3956 | putative DEOR-type transcriptional regulator | chromosome | CDS | 4087314 | 786 | + | 0.522901 |
yiiD | SF3960 | putative acetyltransferase | chromosome | CDS | 4090094 | 990 | + | 0.549495 |
yiiE | SF3965 | hypothetical protein | chromosome | CDS | 4094674 | 246 | + | 0.45935 |
yijC | SF4045 | hypothetical protein | chromosome | CDS | 4181079 | 705 | + | 0.524823 |
yijO | SF4031 | putative ARAC-type regulatory protein | chromosome | CDS | 4162533 | 852 | - | 0.529343 |
yjaE | SF4067 | putative transcriptional regulator | chromosome | CDS | 4215167 | 477 | - | 0.494759 |
yjdC | SF4289 | hypothetical protein | chromosome | CDS | 4466353 | 576 | - | 0.53125 |
yjdG | SF4099 | putative 2-component transcriptional regulator | chromosome | CDS | 4258522 | 720 | + | 0.501389 |
yjeB | SF4333 | hypothetical protein | chromosome | CDS | 4511009 | 426 | + | 0.488263 |
yjfQ | SF4346 | putative DEOR-type transcriptional regulator | chromosome | CDS | 4521977 | 756 | - | 0.507937 |
yjgJ | SF4240 | hypothetical protein | chromosome | CDS | 4412400 | 255 | - | 0.486275 |
yjiE | SF4191 | putative LYSR-type transcriptional regulator | chromosome | CDS | 4365369 | 912 | + | 0.512061 |
yjjM | SF4388 | hypothetical protein | chromosome | CDS | 4561234 | 807 | - | 0.462206 |
yjjQ | SF4398 | putative regulator | chromosome | CDS | 4570478 | 585 | + | 0.45812 |
ylcA | SF0472 | putative 2-component transcriptional regulator | chromosome | CDS | 488664 | 684 | - | 0.54386 |
ynfL | SF1616 | putative LYSR-type transcriptional regulator | chromosome | CDS | 1643328 | 903 | - | 0.518272 |
yphH | SF2597 | putative NAGC-like transcriptional regulator | chromosome | CDS | 2667735 | 1194 | + | 0.512563 |
yqgE | SF2939 | hypothetical protein | chromosome | CDS | 3031168 | 636 | + | 0.514151 |
yqhC | SF3056 | putative ARAC-type regulatory protein | chromosome | CDS | 3149703 | 1128 | - | 0.500886 |
yqjI | SF3112 | hypothetical protein | chromosome | CDS | 3207224 | 624 | + | 0.536859 |
yrbA | SF3230 | hypothetical protein | chromosome | CDS | 3328730 | 270 | - | 0.5 |
ytfA | SF4281 | hypothetical protein | chromosome | CDS | 4459791 | 327 | - | 0.415902 |
ytfH | SF4275 | hypothetical protein | chromosome | CDS | 4453485 | 471 | - | 0.518047 |