TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-18 08:50:57

Gene list

Applied filters:

COG category: Translation, ribosomal structure and biogenesis
Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

Number of genes found: 197

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STY1345 hypothetical proteinchromosome CDS1305121 327 + 0.461774
NA STY4572 hypothetical proteinchromosome CDS4449922 420 + 0.497619
NA HCM1.28c hypothetical proteinpHCM1 CDS9558 312 - 0.442308
NA STY0478 hypothetical proteinchromosome CDS483689 285 + 0.410526
NA HCM2.0043 hypothetical proteinpHCM2 CDS32224 1056 + 0.453598
NA HCM2.0068c hypothetical proteinpHCM2 CDS57876 897 - 0.556299
NA STY1331 putative pseudouridine synthasechromosome CDS1289029 876 + 0.56621
NA STY3500 probable sigma(54) modulation proteinchromosome CDS3340392 288 + 0.461806
NA STY2529 hypothetical proteinchromosome CDS2363684 1983 + 0.540595
NA STY3476 hypothetical proteinchromosome CDS3321965 333 + 0.471471
NA STY2346 hypothetical proteinchromosome CDS2183793 885 + 0.500565
NA STY2617 hypothetical proteinchromosome CDS2450682 933 - 0.530547
NA STY3671 possible lipoproteinchromosome CDS3523748 807 - 0.429988
NA STY2791 putative RNA methyltransferasechromosome CDS2647697 732 - 0.571038
NA STY1330 hypothetical proteinchromosome CDS1288308 621 + 0.52657
NA STY4220 putative regulatory proteinchromosome CDS4085586 381 - 0.435696
NA STY3461 ATP-dependent RNA helicase (dead-box protein)chromosome CDS3301996 1941 - 0.573931
NA STY0091 putative lipoproteinchromosome CDS93425 231 + 0.484848
NA STY1910 putative ATP/GTP-binding proteinchromosome CDS1803420 1092 + 0.527473
NA HCM2.0128 hypothetical proteinpHCM2 CDS102462 306 + 0.486928
NA STY1513 putative isomerasechromosome CDS1469419 1080 - 0.386111
NA STY4595 hypothetical proteinchromosome CDS4471619 360 + 0.469444
NA STY2048 putative bacteriophage proteinchromosome CDS1914557 558 - 0.471326
NA STY1027 hypothetical bacteriophage proteinchromosome CDS1019268 573 + 0.52356
NA STY4448 hypothetical proteinchromosome CDS4317425 339 - 0.572271
NA STY1952 hypothetical proteinchromosome CDS1842160 345 + 0.510145
alaS STY2948 alanyl-tRNA synthetasechromosome CDS2824270 2631 - 0.551121
ansA STY1820 cytoplasmic asparaginase Ichromosome CDS1740439 1017 + 0.526057
ansB STY3259 L-asparaginasechromosome CDS3121165 1047 - 0.527221
argS STY2117 arginyl-tRNA synthetasechromosome CDS1967557 1734 + 0.551326
asnS STY1004 asparaginyl-tRNA synthetasechromosome CDS1001995 1401 - 0.551035
aspS STY2109 aspartyl-tRNA synthetasechromosome CDS1960070 1773 - 0.564016
cca STY3383 tRNA nucleotidyltransferasechromosome CDS3226722 1242 + 0.589372
cysS STY0585 cysteinyl-tRNA synthetasechromosome CDS592342 1386 + 0.549062
def STY4391 peptide deformylasechromosome CDS4252057 510 - 0.515686
efp STY4694 elongation factor Pchromosome CDS4556104 567 + 0.514991
fmt STY4390 methionyl-tRNA formyltransferasechromosome CDS4251094 948 - 0.547468
frr STY0242 ribosome releasing factorchromosome CDS254032 558 + 0.510753
ftsJ STY3475 cell division proteinchromosome CDS3321251 627 - 0.515152
fusA STY4352 elongation factor EF-2chromosome CDS4227831 2115 + 0.51773
glnS STY0724 glutaminyl-tRNA synthetasechromosome CDS723401 1668 + 0.53717
gltX STY2654 glutamyl-tRNA synthetasechromosome CDS2490763 1425 - 0.552982
glyQ STY4143 glycyl-tRNA synthetase alpha subunitchromosome CDS4006109 912 + 0.552632
glyS STY4144 glycyl-tRNA synthetase beta subunitchromosome CDS4007030 2070 + 0.552657
gshB STY3248 glutathione synthetasechromosome CDS3112625 948 + 0.541139
hemK STY1900 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1794100 834 - 0.58753
hisS STY2767 histidyl-tRNA synthetasechromosome CDS2619121 1275 - 0.559216
hslR STY4299 heat shock proteinchromosome CDS4177131 402 - 0.567164
ileS STY0055 isoleucyl-tRNA synthetasechromosome CDS53852 2835 + 0.548501
infA STY0951 translation initiation factor IF-1chromosome CDS940884 219 - 0.488584
infB STY3467 translation initiation factor IF-2chromosome CDS3309421 2679 - 0.553565
infC STY1777 translation initiation factor IF-3chromosome CDS1698011 543 - 0.475138
ksgA STY0105 dimethyladenosine transferasechromosome CDS102467 822 - 0.526764
lasT STY4949 putative RNA methyltransferasechromosome CDS4808327 687 + 0.534207
leuS STY0699 leucyl-tRNA synthetasechromosome CDS693874 2583 - 0.558266
ligT STY0213 2'-5' RNA ligasechromosome CDS222159 531 - 0.613936
lysS STY3196 lysyl-tRNA synthetasechromosome CDS3061741 1518 - 0.539526
map STY0238 methionine aminopeptidasechromosome CDS249937 795 - 0.522013
miaA STY4717 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4579891 951 + 0.541535
miaB STY0716 MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase))chromosome CDS711231 1467 - 0.540559
miaE STY4809 tRNA hydroxylasechromosome CDS4669470 765 + 0.550327
pcnB STY0209 poly(A) polymerasechromosome CDS218282 1419 - 0.562368
pheS STY1773 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1696026 984 - 0.536585
pilK STY4553 hypothetical proteinchromosome CDS4436587 468 + 0.540598
pnp STY3463 polynucleotide phosphorylasechromosome CDS3305058 2136 - 0.56133
prfA STY1901 peptide chain release factor 1chromosome CDS1794933 1083 - 0.579871
prfB STY3197 peptide chain release factor 2chromosome CDS3063268 1098 - 0.540073
prfC STY4910 peptide chain release factor 3chromosome CDS4770453 1590 + 0.543396
prfH STY0360 peptide chain release factor 2chromosome CDS369507 615 + 0.556098
prmA STY3563 ribosomal protein L11 methyltransferasechromosome CDS3407332 882 + 0.556689
proS STY0269 prolyl-tRNA synthetasechromosome CDS280765 1719 - 0.543921
pth STY1909 peptidyl-tRNA hydrolasechromosome CDS1802695 609 + 0.520525
queA STY0442 S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS451765 1065 + 0.556808
rbfA STY3466 ribosome-binding factor Achromosome CDS3308799 402 - 0.534826
relE STY4789 hypothetical proteinchromosome CDS4647757 285 + 0.470175
rfbF STY2302 glucose-1-phosphate cytidylyltransferasechromosome CDS2131338 774 - 0.435401
rhlB STY3640 ATP-dependent RNA helicasechromosome CDS3496937 1266 + 0.546604
rhlE STY0855 putative ATP-dependent RNA helicase rhlEchromosome CDS849385 1368 + 0.584795
rimJ STY1205 ribosomal-protein-alanine acetyltransferasechromosome CDS1162781 585 + 0.512821
rimK STY0908 ribosomal protein S6 modification proteinchromosome CDS900974 903 + 0.563677
rimL STY1453 ribosomal-protein-serine acetyltransferasechromosome CDS1404112 540 + 0.511111
rluA STY0110 ribosomal large subunit pseudouridine synthase Achromosome CDS109129 660 - 0.575758
rluB STY1277 putative ribosomal large subunit pseudouridine synthase Bchromosome CDS1233033 666 - 0.528529
rluC STY1227 ribosomal large subunit pseudouridine synthase Cchromosome CDS1183119 960 + 0.544792
rmf STY1087 ribosome modulation factor (protein E)chromosome CDS1066679 168 + 0.541667
rnG STY3550 ribonuclease Gchromosome CDS3393449 1470 - 0.529252
rna STY0666 ribonuclease I precursorchromosome CDS664818 807 - 0.551425
rnd STY1947 ribonuclease Dchromosome CDS1835623 1128 - 0.549645
rne STY1226 ribonuclease Echromosome CDS1179342 3204 - 0.581461
rnpA STY3939 ribonuclease Pchromosome CDS3803950 360 - 0.558333
rph STY4060 ribonuclease PHchromosome CDS3920902 717 + 0.546722
rplA STY3735 50S ribosomal protein L1chromosome CDS3586968 705 - 0.533333
rplB STY4361 50S ribosomal protein L2chromosome CDS4234878 822 + 0.532847
rplC STY4358 50S ribosomal protein L3chromosome CDS4233316 630 + 0.515873
rplD STY4359 50S ribosomal protein L4chromosome CDS4233956 606 + 0.533003
rplE STY4370 50S ribosomal protein L5chromosome CDS4238803 540 + 0.494444
rplF STY4373 50S ribosomal protein L6chromosome CDS4240101 534 + 0.516854
rplI STY4750 50S ribosomal protein L9chromosome CDS4607047 450 + 0.508889
rplJ STY3734 50S ribosomal protein L10chromosome CDS3586055 498 - 0.52008
rplK STY3736 50S ribosomal protein L11chromosome CDS3587676 429 - 0.524476
rplL STY3733 50S ribosomal protein L7/L12chromosome CDS3585623 366 - 0.464481
rplM STY3525 50S ribosomal protein L13chromosome CDS3366425 429 - 0.512821
rplN STY4368 50S ribosomal protein L14chromosome CDS4238092 372 + 0.5
rplO STY4377 50S ribosomal protein L15chromosome CDS4241702 435 + 0.544828
rplP STY4365 50S ribosomal protein L16chromosome CDS4237073 411 + 0.523114
rplQ STY4384 50S ribosomal protein L17chromosome CDS4246242 384 + 0.544271
rplR STY4374 50S ribosomal protein L18chromosome CDS4240644 354 + 0.528249
rplS STY2860 50S ribosomal protein L19chromosome CDS2730753 348 - 0.482759
rplT STY1775 50S ribosomal protein L20chromosome CDS1697311 357 - 0.498599
rplU STY3483 50S ribosomal protein L21chromosome CDS3327301 312 - 0.490385
rplV STY4363 50S ribosomal protein L22chromosome CDS4236009 333 + 0.501502
rplW STY4360 50S ribosomal protein L23chromosome CDS4234558 303 + 0.491749
rplX STY4369 50S ribosomal protein L24chromosome CDS4238474 315 + 0.457143
rplY STY2461 50S ribosomal protein L25chromosome CDS2292820 285 + 0.512281
rpmA STY3482 50S ribosomal protein L27chromosome CDS3327024 258 - 0.496124
rpmB STY4066 50S ribosomal protein L28chromosome CDS3925835 237 + 0.518987
rpmC STY4366 50S ribosomal protein L29chromosome CDS4237483 192 + 0.53125
rpmD STY4376 50S ribosomal protein L30chromosome CDS4241519 180 + 0.511111
rpmE STY3774 50S ribosomal protein L31chromosome CDS3639438 213 - 0.488263
rpmE2 STY0512 50S ribosomal protein L31chromosome CDS519213 261 + 0.43295
rpmF STY1230 50S ribosomal protein L32chromosome CDS1185516 174 + 0.528736
rpmG STY4067 50S ribosomal protein L33chromosome CDS3926092 168 + 0.404762
rpmH STY3939A 50S ribosomal protein L34chromosome CDS3804326 141 - 0.524823
rpmI STY1776 50S ribosomal protein L35chromosome CDS1697718 198 - 0.484848
rpmJ STY4379 50S ribosomal protein L36chromosome CDS4243507 117 + 0.478632
rpmJ2 STY0513 50S ribosomal protein L36chromosome CDS519479 141 + 0.432624
rpsA STY0981 30S ribosomal protein S1chromosome CDS976302 1674 + 0.510753
rpsB STY0239 30S ribosomal protein S2chromosome CDS251181 726 + 0.511019
rpsC STY4364 30S ribosomal protein S3chromosome CDS4236359 702 + 0.511396
rpsD STY4382 30S ribosomal protein S4chromosome CDS4244566 621 + 0.513688
rpsE STY4375 30S ribosomal protein S5chromosome CDS4241012 504 + 0.505952
rpsF STY4747 30S ribosomal protein S6chromosome CDS4606057 396 + 0.527778
rpsG STY4351 30S ribosomal protein S7chromosome CDS4227264 471 + 0.498938
rpsH STY4372 30S ribosomal protein S8chromosome CDS4239696 393 + 0.501272
rpsI STY3524 30S ribosomal protein S9chromosome CDS3366017 393 - 0.531807
rpsJ STY4357 30S ribosomal protein S10chromosome CDS4232972 312 + 0.544872
rpsK STY4381 30S ribosomal protein S11chromosome CDS4244143 390 + 0.512821
rpsL STY4350 30S ribosomal protein S12chromosome CDS4226794 375 + 0.528
rpsM STY4380 30S ribosomal protein S13chromosome CDS4243770 357 + 0.521008
rpsN STY4371 30S ribosomal protein S14chromosome CDS4239357 306 + 0.522876
rpsO STY3464 30S ribosomal protein S15chromosome CDS3307435 270 - 0.5
rpsP STY2863 30S ribosomal protein S16chromosome CDS2732520 249 - 0.522088
rpsQ STY4367 30S ribosomal protein S17chromosome CDS4237674 255 + 0.478431
rpsR STY4749 30S ribosomal protein S18chromosome CDS4606778 228 + 0.52193
rpsS STY4362 30S ribosomal protein S19chromosome CDS4235716 279 + 0.491039
rpsT STY0052 30S ribosomal protein S20chromosome CDS52277 264 - 0.465909
rpsU STY3388 30S ribosomal protein S21chromosome CDS3231555 216 + 0.518519
rsmC STY4906 16S ribosomal RNA m2G1207 methyltransferasechromosome CDS4767703 1029 - 0.5724
rumA STY3095 23S rRNA (uracil-5-)-methyltransferasechromosome CDS2960705 1296 - 0.542438
selB STY4114 selenocysteine-specific elongation factorchromosome CDS3975401 1851 + 0.568882
serS STY0961 seryl-tRNA synthetasechromosome CDS954308 1293 + 0.53983
sfhB STY2851 ftsH suppressor protein SfhBchromosome CDS2721427 981 - 0.534149
smpA STY2871 small protein Achromosome CDS2740983 339 + 0.516224
speG STY1561 spermidine N1-acetyltransferasechromosome CDS1510962 561 + 0.477718
srmB STY2836 ATP-dependent RNA helicase SrmBchromosome CDS2698505 1335 + 0.548315
strA HCM1.223 streptomycin phosphotransferasepHCM1 CDS166864 804 + 0.562189
sun STY4389 sun proteinchromosome CDS4249753 1290 - 0.542636
tgt STY0443 queuine tRNA-ribosyltransferasechromosome CDS453026 1128 + 0.525709
thrS STY1778 threonyl-tRNA synthetasechromosome CDS1698557 1929 - 0.50337
trmA STY3745 tRNA (uracil-5-)-methyltransferasechromosome CDS3603465 1101 + 0.520436
trmD STY2861 tRNA (guanine-N(1)-)-methyltransferasechromosome CDS2731141 768 - 0.540365
trmH STY4049 tRNA (guanosine-2'-O)-methyltransferasechromosome CDS3911423 690 - 0.547826
trmU STY1274 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1231074 1107 - 0.542005
trpS STY4315 tryptophanyl-tRNA synthetasechromosome CDS4193344 1005 + 0.517413
trpS2 STY4863 tryptophanyl-tRNA synthetasechromosome CDS4725840 1014 - 0.523669
truA STY2599 tRNA pseudouridine synthase Achromosome CDS2435482 813 - 0.558426
truB STY3465 tRNA pseudouridine synthase Bchromosome CDS3307855 945 - 0.557672
tsf STY0240 elongation factor Tschromosome CDS252164 852 + 0.529343
tuf STY4353 elongation factor Tuchromosome CDS4230017 1185 + 0.53924
tuf STY3739 elongation factor Tuchromosome CDS3589422 1185 - 0.537553
tyrS STY1673 tyrosyl-tRNA synthetasechromosome CDS1601969 1275 - 0.527843
valS STY4814 valyl-tRNA synthetasechromosome CDS4673101 2856 - 0.566176
yadB STY0210 glutamyl-tRNA synthetasechromosome CDS219841 897 - 0.578595
yaeJ STY0265 hypothetical proteinchromosome CDS278825 423 + 0.553191
ybfE STY0733 hypothetical proteinchromosome CDS733795 294 - 0.527211
ybjF STY0915 23S rRNA (uracil-5-)-methyltransferasechromosome CDS907526 1128 + 0.562057
yeiP STY2447 chromosome pseudo2277111 573 + 0.511344
yeiP STY2447 chromosome pseudo2277111 573 + 0.511344
yejD STY2459 ribosomal small subunit pseudouridine synthasechromosome CDS2290088 696 - 0.54454
yfhC STY2814 hypothetical proteinchromosome CDS2678079 552 - 0.565217
yfiA STY2853 putative sigma(54) modulation proteinchromosome CDS2723548 339 + 0.471976
yfiF STY2841 putative RNA methyltransferasechromosome CDS2703013 1038 - 0.570328
yfjA STY2862 16S rRNA-processing proteinchromosome CDS2731953 549 - 0.499089
ygjO STY3400 hypothetical proteinchromosome CDS3245856 1137 - 0.532982
yhdG STY3564 hypothetical proteinchromosome CDS3408993 846 + 0.536643
yhjN STY4182 putative polysaccharide biosynthesis protein subunit Bchromosome CDS4042585 2301 + 0.569318
yibK STY4101 putative RNA-methyltransferasechromosome CDS3959072 474 - 0.563291
yihZ STY3850 D-tyrosyl-tRNA deacylasechromosome CDS3706680 438 - 0.554795
yjbC STY4410 putative pseudouridine synthasechromosome CDS4277873 870 + 0.510345
yjbN STY4439 hypothetical proteinchromosome CDS4309084 999 + 0.546547
yjeA STY4704 lysyl-tRNA synthetasechromosome CDS4562588 978 + 0.541922
yjfH STY4726 probable tRNA/rRNA methyltransferasechromosome CDS4589954 732 + 0.572404
yjgF STY4798 hypothetical proteinchromosome CDS4659111 387 - 0.547804
yliG STY0891 hypothetical proteinchromosome CDS885863 1326 - 0.539216
yohI STY2404 hypothetical proteinchromosome CDS2236307 939 - 0.574015
yqcB STY3103 putative RNA pseudouridylate synthasechromosome CDS2971083 783 - 0.582375
yrdC STY4395 hypothetical proteinchromosome CDS4254841 573 + 0.541012