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2024-05-18 14:03:21

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Shigella flexneri 5 str. 8401, 8401

Number of genes found: 148

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SFV_1207 putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1250867 759 - 0.540184
NA SFV_0554 hypothetical proteinchromosome CDS583894 411 - 0.506083
NA SFV_1208 putative iron compound ABC transporter, permease proteinchromosome CDS1251622 981 - 0.541284
NA SFV_2759 phenylacrylic acid decarboxylase-like proteinchromosome CDS2825996 594 + 0.56734
NA SFV_2432 putative enzymechromosome CDS2487059 1695 - 0.464307
NA SFV_1608 hypothetical proteinchromosome CDS1640261 696 - 0.520115
NA SFV_4031 starvation-sensing proteinchromosome CDS4146101 1215 + 0.501235
NA SFV_1689 hypothetical proteinchromosome CDS1725833 306 + 0.447712
apbA SFV_0390 alternative pyrimidine biosynthesischromosome CDS407075 912 - 0.513158
bioA SFV_0758 7,8-diaminopelargonic acid synthetasechromosome CDS786773 1401 - 0.549607
bioB SFV_0757 biotin synthesischromosome CDS788149 1041 + 0.554275
bioD SFV_0761 dethiobiotin synthetasechromosome CDS791075 678 + 0.539823
bioF SFV_0759 8-amino-7-oxononanoate synthasechromosome CDS789186 1155 + 0.586147
birA SFV_4046 biotin--protein ligasechromosome CDS4164019 966 + 0.493789
btuC SFV_1512 vitamin B12 transport permease proteinchromosome CDS1552439 981 + 0.549439
btuD SFV_1514 ATP-binding component of vitamin B12 transport systemchromosome CDS1554033 750 + 0.550667
btuR SFV_1282 cob(I)alamin adenolsyltransferasechromosome CDS1335982 591 - 0.510998
citG SFV_0566 hypothetical proteinchromosome CDS595841 879 - 0.552901
coaA SFV_4047 pantothenate kinasechromosome CDS4165013 1107 - 0.443541
cobS SFV_2064 cobalamin 5'-phosphate synthasechromosome CDS2084091 744 - 0.534946
cobT SFV_2063 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2083000 1080 - 0.511111
cobU SFV_2065 cobinamide kinase/cobinamide phosphate guanylyltransferasechromosome CDS2084831 546 - 0.498168
cysD SFV_2746 ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2chromosome CDS2815552 909 + 0.536854
cysG SFV_3374 sirohaeme biosynthesischromosome CDS3428969 1374 + 0.542213
cysH SFV_2743 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS2811682 735 + 0.515646
dfp SFV_3891 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3994122 1221 - 0.532351
dxs SFV_0385 1-deoxyxylulose-5-phosphate synthasechromosome CDS401786 1797 - 0.540901
fepC SFV_0536 ATP-binding component of ferric enterobactin transportchromosome CDS566212 816 - 0.53799
fepG SFV_0537 ferric enterobactin transport proteinchromosome CDS567024 993 - 0.584089
fhuC SFV_0136 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS161189 840 + 0.559524
folA SFV_0042 dihydrofolate reductase type Ichromosome CDS48809 480 + 0.529167
folC SFV_2384 dihydrofolate synthetasechromosome CDS2433683 1269 - 0.560284
folD SFV_0487 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS512942 825 - 0.550303
folE SFV_2228 GTP cyclohydrolase Ichromosome CDS2259154 669 - 0.509716
folK SFV_0127 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinasechromosome CDS148706 480 - 0.520833
folP SFV_3207 7,8-dihydropteroate synthasechromosome CDS3279903 849 - 0.515901
folX SFV_2370 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS2421997 363 + 0.449036
gcl SFV_0474 glyoxylate carboligasechromosome CDS501155 1830 + 0.521858
gshA SFV_2816 gamma-glutamate-cysteine ligasechromosome CDS2880219 1557 + 0.512524
gshB SFV_3001 glutathione synthetasechromosome CDS3068749 951 + 0.535226
hemA SFV_1224 HemAchromosome CDS1273119 1455 + 0.524399
hemB SFV_0333 delta-aminolevulinic acid dehydratasechromosome CDS351938 1008 - 0.53869
hemC SFV_3697 porphobilinogen deaminasechromosome CDS3783728 963 + 0.555556
hemD SFV_3698 uroporphyrinogen III synthasechromosome CDS3784687 741 + 0.529015
hemE SFV_4069 uroporphyrinogen decarboxylasechromosome CDS4187734 1065 + 0.562441
hemF SFV_2488 coproporphyrinogen III oxidasechromosome CDS2542863 900 + 0.55
hemG SFV_3650 protoporphyrin oxidasechromosome CDS3735564 546 - 0.514652
hemH SFV_0448 ferrochelatasechromosome CDS472126 963 + 0.543095
hemL SFV_0139 glutamate-1-semialdehyde aminotransferase (aminomutase)chromosome CDS164932 1281 - 0.558158
hemN SFV_3634 O2-independent coproporphyrinogen III oxidasechromosome CDS3716785 1374 - 0.527656
hemY SFV_3700 a late step of protoheme IX synthesischromosome CDS3786669 1197 + 0.543024
ilvB SFV_3838 acetolactate synthase I,valine-sensitive, large subunitchromosome CDS3934050 1689 + 0.560687
ilvC SFV_3729 ketol-acid reductoisomerasechromosome CDS3814053 1611 - 0.523277
ilvE SFV_3732 branched-chain amino-acid aminotransferasechromosome CDS3820027 855 - 0.548538
ilvG SFV_3734 Acetolactate synthase II, large subunitchromosome CDS3821236 1647 - 0.545234
ilvI SFV_0068 acetolactate synthase isozyme III large subunitchromosome CDS83165 1701 + 0.527925
ispA SFV_0386 geranyltranstransferase (farnesyldiphosphate synthase)chromosome CDS403673 900 - 0.543333
ispB SFV_3217 octaprenyl diphosphate synthasechromosome CDS3289549 972 + 0.526749
kbl SFV_3911 2-amino-3-ketobutyrate CoA ligasechromosome CDS4013324 1197 + 0.543024
kdtB SFV_3895 putative enzyme of lipopolysaccharide synthesischromosome CDS3997769 480 - 0.527083
ldhA SFV_1805 fermentative D-lactate dehydrogenasechromosome CDS1849309 990 - 0.50101
lipA SFV_0698 lipoate synthesischromosome CDS734806 951 + 0.537329
lipB SFV_0696 protein of lipoate biosynthesischromosome CDS732729 642 + 0.476636
menA SFV_4001 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4105778 927 - 0.532902
menB SFV_2333 dihydroxynaphtoic acid synthetasechromosome CDS2382439 858 - 0.551282
menC SFV_2332 O-succinylbenzoate synthasechromosome CDS2381477 927 - 0.590075
menD SFV_2335 2-oxoglutarate decarboxylasechromosome CDS2384066 1860 - 0.565591
menF SFV_2336 isochorismate hydroxymutase 2chromosome CDS2385825 1296 - 0.534722
menG SFV_4000 menaquinone biosynthesis, unknownchromosome CDS4105200 486 - 0.520576
metK SFV_2996 S-adenosylmethionine synthetasechromosome CDS3063566 1155 + 0.533333
moaA SFV_0764 molybdopterin biosynthesis, protein Achromosome CDS795817 1023 + 0.540567
moaB SFV_0765 molybdopterin biosynthesis, protein Bchromosome CDS796861 513 + 0.524366
moaC SFV_0766 molybdopterin biosynthesis, protein Cchromosome CDS797376 486 + 0.561728
moaD SFV_0767 molybdopterin biosynthesischromosome CDS797854 246 + 0.569106
moaE SFV_0768 molybdopterin converting factor, subunit 2chromosome CDS798101 453 + 0.576159
mobA SFV_3644 putative mobilization protein MobAchromosome CDS3728990 576 + 0.512153
modD SFV_1205 putative molybdenum transport proteinchromosome CDS1249194 855 - 0.523977
moeA SFV_0810 molybdopterin biosynthesischromosome CDS845272 1236 - 0.563916
moeB SFV_0809 molybdopterin biosynthesischromosome CDS844523 726 - 0.557851
mog SFV_0008 predicted molybdochelatasechromosome CDS9368 591 + 0.539763
nadA SFV_0590 quinolinate synthetase, A proteinchromosome CDS618143 1044 - 0.503831
nadC SFV_0100 quinolinate phosphoribosyltransferasechromosome CDS115686 894 - 0.533557
nadE SFV_1480 NAD synthetasechromosome CDS1524623 828 - 0.487923
nadR SFV_4424 probable nadAB transcriptional regulatorchromosome CDS4560002 1233 + 0.514193
pabA SFV_3366 p-aminobenzoate synthetase, component IIchromosome CDS3421398 564 - 0.537234
pabB SFV_1417 p-aminobenzoate synthetase, component Ichromosome CDS1464666 1362 - 0.507342
pabC SFV_1116 4-amino-4-deoxychorismate lyasechromosome CDS1159092 810 + 0.506173
panB SFV_0124 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS146573 795 - 0.537107
panC SFV_0123 pantothenate synthetasechromosome CDS145710 852 - 0.5223
panD SFV_0121 aspartate 1-decarboxylasechromosome CDS144080 381 - 0.527559
panF SFV_3283 sodium/pantothenate symporterchromosome CDS3357838 1452 + 0.542011
pdxA SFV_0046 pyridoxine biosynthesischromosome CDS51413 990 - 0.562626
pdxB SFV_2389 erythronate-4-phosphate dehyrogenasechromosome CDS2438724 1137 - 0.5365
pdxH SFV_1655 pyridoxinephosphate oxidasechromosome CDS1693557 657 - 0.515982
pdxJ SFV_2627 pyridoxine biosynthesischromosome CDS2694693 732 - 0.553279
pdxK SFV_2470 pyridoxal/pyridoxine/pyridoxamine kinasechromosome CDS2527388 852 - 0.517606
pdxY SFV_1653 pyridoxine kinasechromosome CDS1691232 861 - 0.527294
pncB SFV_0933 nicotinate phosphoribosyltransferasechromosome CDS981315 1251 - 0.511591
pnuC SFV_0589 required for NMN transportchromosome CDS617386 720 - 0.483333
poxB SFV_0859 pyruvate oxidasechromosome CDS893999 1719 - 0.535777
ribA SFV_1290 GTP cyclohydrolase IIchromosome CDS1346786 591 - 0.500846
ribB SFV_3085 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS3150690 654 - 0.527523
ribD SFV_0379 5-amino-6-(5-phosphoribosylamino)uracil reductasechromosome CDS397069 1086 + 0.558011
ribE SFV_1684 riboflavin synthase, alpha chainchromosome CDS1721734 642 - 0.478193
ribF SFV_0019 putative regulatorchromosome CDS20428 942 + 0.529724
ribH SFV_0380 riboflavin synthase, beta chainchromosome CDS398189 525 + 0.525714
rimK SFV_0837 ribosomal protein S6 modification proteinchromosome CDS873377 903 + 0.555925
rspA SFV_1563 starvation sensing proteinchromosome CDS1599987 1215 + 0.507819
serA SFV_2960 D-3-phosphoglycerate dehydrogenasechromosome CDS3030087 1233 - 0.52717
serC SFV_0907 3-phosphoserine aminotransferasechromosome CDS946978 1053 + 0.507123
tbpA SFV_0060 thiamin-binding periplasmic proteinchromosome CDS72007 984 - 0.529472
thiC SFV_4066 thiamin biosynthesis, pyrimidine moietychromosome CDS4184221 1896 - 0.55538
thiD SFV_2158 phosphomethylpyrimidine kinasechromosome CDS2191521 801 - 0.55181
thiE SFV_4065 thiamin biosynthesis, thiazole moietychromosome CDS4183586 636 - 0.578616
thiF SFV_4064 thiamin biosynthesis, thiazole moietychromosome CDS4182838 756 - 0.56746
thiH SFV_4061 thiamin biosynthesis, thiazole moietychromosome CDS4180752 1134 - 0.546737
thiL SFV_0382 thiamin-monophosphate kinasechromosome CDS399230 978 + 0.542945
thiM SFV_2159 hydoxyethylthiazole kinasechromosome CDS2192318 789 - 0.541191
thiS SFV_4062 Sulfur transfer proteinchromosome CDS4182654 201 - 0.552239
trpE SFV_1278 anthranilate synthase component Ichromosome CDS1331635 1563 - 0.539987
ubiA SFV_4173 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4308379 873 - 0.512028
ubiB SFV_3656 NAD(P)H-flavin reductasechromosome CDS3743300 735 - 0.526531
ubiC SFV_4174 chorismate lyasechromosome CDS4309264 609 - 0.499179
ubiE SFV_3665 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS3750918 756 - 0.519841
ubiG SFV_2303 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2348731 723 + 0.543568
ubiH SFV_2955 2-octaprenyl-6-methoxyphenol 4-monoxygenasechromosome CDS3024857 1179 - 0.597116
ubiX SFV_2380 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2430065 570 - 0.531579
visC SFV_2954 hypothetical proteinchromosome CDS3023632 1203 - 0.550291
yabJ SFV_0058 putative ATP-binding component of a transport systemchromosome CDS69739 699 - 0.567954
yabK SFV_0059 putative transport system permease proteinchromosome CDS70421 1611 - 0.584109
yacE SFV_0095 putative DNA repair proteinchromosome CDS110771 621 - 0.523349
ybdU SFV_0567 hypothetical proteinchromosome CDS596694 552 - 0.586957
ybeN SFV_0687 hypothetical proteinchromosome CDS724434 642 + 0.498442
yclC SFV_2760 putative 4-hydroxybenzoate decarboxylasechromosome CDS2826589 951 + 0.56572
ygcM SFV_2740 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2807416 450 - 0.473333
ygcX SFV_2670 putative glucarate dehydratasechromosome CDS2741535 1341 + 0.529456
ygdL SFV_2891 putative enzymechromosome CDS2952472 807 - 0.551425
ygfA SFV_2959 putative ligasechromosome CDS3028560 747 + 0.527443
yggC SFV_2980 putative kinasechromosome CDS3049807 714 - 0.542017
yggW SFV_3009 putative oxidasechromosome CDS3074130 1137 + 0.524186
ygiG SFV_3098 putative kinasechromosome CDS3165180 369 - 0.506775
yhhU SFV_3478 hypothetical proteinchromosome CDS3543904 588 + 0.569728
yiaE SFV_3534 putative dehydrogenasechromosome CDS3602120 975 - 0.518974
yieE SFV_3799 hypothetical proteinchromosome CDS3890989 750 - 0.521333
yigC SFV_3657 putative oxidoreductasechromosome CDS3744047 1494 - 0.536145
yjcG SFV_4144 putative transport proteinchromosome CDS4276837 1539 + 0.551007
yleB SFV_0665 hypothetical proteinchromosome CDS699929 1176 - 0.561224
yojL SFV_2289 hypothetical proteinchromosome CDS2325590 1056 - 0.533144