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2024-05-18 15:09:58

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Escherichia coli UTI89, UTI89

Number of genes found: 165

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Escherichia coli UTI89, UTI89
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA UTI89_C3460 putative iron compound permease protein of ABC transporter familychromosome CDS3393829 1050 - 0.509524
NA UTI89_C3828 hypothetical proteinchromosome CDS3713485 201 + 0.557214
NA UTI89_C3461 putative iron compound permease protein of ABC transporter familychromosome CDS3394875 984 - 0.543699
NA UTI89_C2705 putative enzymechromosome CDS2651524 1695 - 0.471386
NA UTI89_C0682 putative pyridoxine phosphate biosynthetic proteinchromosome CDS687848 987 + 0.52077
NA UTI89_C2263 putative ABC transporterchromosome CDS2202655 768 - 0.566406
NA UTI89_C1386 putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1321235 759 - 0.538867
NA UTI89_C3400 hypothetical proteinchromosome CDS3337091 1173 + 0.522592
NA UTI89_C4627 putative transporterchromosome CDS4521508 558 + 0.507168
NA UTI89_C4628 NadR transcriptional repressor / NMN adenylyltransferasechromosome CDS4522038 1023 + 0.512219
NA UTI89_C4552 starvation sensing protein RspAchromosome CDS4442754 1215 + 0.499588
NA UTI89_C4038 putative ATP-binding protein of ABC transport systemchromosome CDS3921182 801 + 0.491885
NA UTI89_C1387 putative iron compound ABC transporter, permease proteinchromosome CDS1321990 981 - 0.546381
NA UTI89_C2223 hypothetical proteinchromosome CDS2165689 735 + 0.341497
acpT UTI89_C3991 4'-phosphopantetheinyl transferase AcpTchromosome CDS3879458 588 + 0.568027
apbA UTI89_C0448 2-dehydropantoate reductasechromosome CDS457723 912 - 0.51864
apbE UTI89_C2495 hypothetical proteinchromosome CDS2446794 1056 - 0.532197
bioA UTI89_C0772 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS771065 1401 - 0.552463
bioB UTI89_C0773 biotin synthasechromosome CDS772441 1041 + 0.54755
bioD UTI89_C0776 dethiobiotin synthetasechromosome CDS775367 678 + 0.547198
bioF UTI89_C0774 8-amino-7-oxononanoate synthasechromosome CDS773478 1155 + 0.579221
birA UTI89_C3803 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressorchromosome CDS3691063 966 - 0.490683
btuC UTI89_C1904 vitamin B12 transport permease proteinchromosome CDS1829758 981 - 0.553517
btuD UTI89_C1902 vitamin B12 transport ATP-binding protein BtuDchromosome CDS1828396 750 - 0.552
btuR UTI89_C1538 cob(I)alamin adenolsyltransferasechromosome CDS1448714 591 - 0.50423
chuW UTI89_C4034 putative oxygen independent coproporphyrinogen III oxidasechromosome CDS3917707 1338 + 0.521674
citG UTI89_C0615 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthasechromosome CDS629081 879 - 0.5438
citX UTI89_C0616 apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS629934 552 - 0.585145
coaA UTI89_C3802 pantothenate kinasechromosome CDS3690063 972 + 0.440329
coaE UTI89_C0111 dephospho-CoA kinasechromosome CDS114922 621 - 0.523349
cobS UTI89_C2230 cobalamin 5'-phosphate synthase / cobalamin synthasechromosome CDS2170532 780 - 0.528205
cobT UTI89_C2229 CobT, subunit of dimethylbenzimidazole phosphoribosyltransferasechromosome CDS2169441 1080 - 0.512037
cobU UTI89_C2231 cobalamin biosynthesis protein CobUchromosome CDS2171272 546 - 0.503663
cysD UTI89_C3123 sulfate adenylyltransferase subunit 2chromosome CDS3037604 909 - 0.534653
cysG UTI89_C3872 multifunctional protein; Uroporphyrin-III C-methyltransferase; Ferrochelatase; Precorrin-2 oxidasechromosome CDS3755832 1374 + 0.540029
cysH UTI89_C3126 phosphoadenosine phosphosulfate reductasechromosome CDS3040343 735 - 0.510204
dfp UTI89_C4183 flavoprotein affecting synthesis of DNA and pantothenate metabolismchromosome CDS4071187 1293 + 0.528229
dgoA UTI89_C4243 bifunctional 2-oxo-3-deoxygalactonate 6-phosphate aldolase/galactonate dehydratasechromosome CDS4133419 1149 - 0.529156
dxs UTI89_C0443 1-deoxyxylulose-5-phosphate synthasechromosome CDS452434 1863 - 0.540526
entC UTI89_C0595 isochorismate synthasechromosome CDS608794 1188 + 0.557239
fepC UTI89_C0590 ferric enterobactin transport ATP-binding protein fepCchromosome CDS603491 816 - 0.547794
fepD UTI89_C0592 ferric enterobactin transport system permease protein fepDchromosome CDS605292 1017 - 0.599803
fepG UTI89_C0591 ferric enterobactin transport system permease protein fepGchromosome CDS604303 993 - 0.577039
fhuC UTI89_C0167 ferrichrome transport ATP-binding protein FhuCchromosome CDS175617 903 + 0.55814
folA UTI89_C0054 dihydrofolate reductasechromosome CDS52324 615 + 0.520325
folC UTI89_C2600 bifunctional folylpolyglutamate synthase/dihydrofolate synthasechromosome CDS2564087 1269 - 0.55792
folD UTI89_C0559 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS567893 867 - 0.545559
folE UTI89_C2427 FolE subunit of GTP cyclohydrolase Ichromosome CDS2384194 669 - 0.508221
folK UTI89_C0156 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS163299 480 - 0.495833
folP UTI89_C3609 7,8-dihydropteroate synthasechromosome CDS3543893 915 - 0.512568
folX UTI89_C2587 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS2553466 363 + 0.446281
fre UTI89_C4429 NAD(P)H-flavin reductasechromosome CDS4312921 735 + 0.521088
gcl UTI89_C0536 glyoxylate carboligasechromosome CDS544567 1872 + 0.525107
gclA UTI89_C5032 putative glycoxylate carboligase GclAchromosome CDS4932777 1740 - 0.477012
gshA UTI89_C3050 gamma-glutamate-cysteine ligasechromosome CDS2973683 1557 - 0.514451
gshB UTI89_C3336 glutathione synthetasechromosome CDS3269530 951 + 0.526814
gudD UTI89_C3157 glucarate dehydratasechromosome CDS3072501 1341 - 0.536913
hemA UTI89_C1404 glutamyl-tRNA reductasechromosome CDS1338833 1455 + 0.519588
hemB UTI89_C0388 delta-aminolevulinic acid dehydratasechromosome CDS404170 1008 - 0.539683
hemC UTI89_C4364 porphobilinogen deaminasechromosome CDS4249836 963 - 0.566978
hemD UTI89_C4363 uroporphyrinogen-III synthasechromosome CDS4249099 741 - 0.535762
hemE UTI89_C3822 uroporphyrinogen decarboxylasechromosome CDS3707542 1065 - 0.560563
hemF UTI89_C2769 coproporphyrinogen III oxidase, aerobicchromosome CDS2709656 903 + 0.548173
hemG UTI89_C4435 protoporphyrinogen oxidasechromosome CDS4320937 546 + 0.509158
hemH UTI89_C0503 ferrochelatase (heme synthetase)chromosome CDS512082 963 + 0.535826
hemL UTI89_C0170 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS179423 1281 - 0.556596
hemN UTI89_C4456 oxygen-independent coproporphyrinogen III oxidasechromosome CDS4338197 1380 + 0.530435
hemY UTI89_C4361 protoheme IX synthesis late stage proteinchromosome CDS4246679 1197 - 0.550543
ilvB UTI89_C4227 acetolactate synthase isozyme I large subunitchromosome CDS4117113 1689 - 0.561279
ilvC UTI89_C4330 ketol-acid reductoisomerasechromosome CDS4218632 1626 + 0.52214
ilvE UTI89_C4326 branched-chain amino acid aminotransferasechromosome CDS4213354 930 + 0.54086
ilvG UTI89_C4324 acetohydroxy acid synthase IIchromosome CDS4211428 1647 + 0.540376
ilvI UTI89_C0085 acetolactate synthase isozyme III large subunitchromosome CDS87982 1815 + 0.527273
ispA UTI89_C0444 geranyltranstransferasechromosome CDS454321 900 - 0.538889
ispB UTI89_C3621 octaprenyl diphosphate synthasechromosome CDS3553383 972 + 0.52572
kbl UTI89_C4163 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS4053070 1197 - 0.54386
kdtB UTI89_C4177 phosphopantetheine adenylyltransferasechromosome CDS4068353 480 + 0.522917
ldhA UTI89_C1623 fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1538099 990 - 0.50404
lipA UTI89_C0631 lipoate synthesis proteinchromosome CDS641702 966 - 0.536232
lipB UTI89_C0632 lipoate-protein ligase Bchromosome CDS643487 642 - 0.476636
lplA UTI89_C5157 lipoate-protein ligase Achromosome CDS5046795 1017 - 0.575221
menA UTI89_C4515 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4396421 939 - 0.534611
menB UTI89_C2545 dihydroxynaphtoic acid synthetasechromosome CDS2511982 858 - 0.539627
menC UTI89_C2544 O-succinylbenzoate-CoA synthasechromosome CDS2511020 963 - 0.597092
menD UTI89_C2548 Menaquinone biosynthesis protein MenDchromosome CDS2513609 1860 - 0.563978
menF UTI89_C2549 menaquinone-specific isochorismate synthasechromosome CDS2515368 1296 - 0.532407
menG UTI89_C4513 ribonuclease E inhibitor subunitchromosome CDS4395843 486 - 0.522634
metK UTI89_C3331 S-adenosylmethionine synthetasechromosome CDS3264333 1167 + 0.526992
moaA UTI89_C0780 molybdenum cofactor biosynthesis protein Achromosome CDS779906 1071 + 0.532213
moaB UTI89_C0781 molybdopterin biosynthesis, protein Bchromosome CDS780998 513 + 0.526316
moaC UTI89_C0783 molybdopterin biosynthesis, protein Cchromosome CDS781513 486 + 0.563786
moaD UTI89_C0784 molybdopterin converting factor subunit 1chromosome CDS781970 267 + 0.558052
moaE UTI89_C0785 molybdopterin converting factor subunit 2chromosome CDS782238 453 + 0.560706
mobA UTI89_C4444 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4327572 585 - 0.504274
mobB UTI89_C4443 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4327063 528 - 0.496212
modD UTI89_C1384 putative pyrophosphorylase ModDchromosome CDS1319562 855 - 0.519298
moeA UTI89_C0830 molybdopterin biosynthesis protein MoeAchromosome CDS826344 1236 - 0.563107
moeB UTI89_C0829 molybdopterin biosynthesis protein MoeBchromosome CDS825595 750 - 0.553333
mog UTI89_C0010 molybdopterin biosynthesis mog proteinchromosome CDS9189 591 + 0.541455
nadA UTI89_C0747 quinolinate synthetase Achromosome CDS745263 1044 + 0.506705
nadB UTI89_C2896 L-aspartate oxidasechromosome CDS2852162 1623 + 0.530499
nadC UTI89_C0117 nicotinate-nucleotide pyrophosphorylase (carboxylating)chromosome CDS120076 936 - 0.523504
nadE UTI89_C1934 NH(3)-dependent NAD(+) synthetasechromosome CDS1855920 828 + 0.495169
nadR UTI89_C5161 transcriptional regulator NadRchromosome CDS5050988 1254 + 0.50638
pabA UTI89_C3863 para-aminobenzoate synthase glutamine amidotransferase component IIchromosome CDS3748271 564 - 0.52305
pabB UTI89_C2008 para-aminobenzoate synthase component Ichromosome CDS1921494 1362 + 0.517621
pabC UTI89_C1222 4-amino-4-deoxychorismate lyasechromosome CDS1198263 810 + 0.507407
panB UTI89_C0148 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS154828 795 - 0.548428
panC UTI89_C0147 Pantoate-beta-alanine ligasechromosome CDS153965 852 - 0.5223
panD UTI89_C0144 aspartate 1-decarboxylasechromosome CDS152345 381 - 0.532808
panF UTI89_C3700 sodium/pantothenate symporterchromosome CDS3625557 1458 + 0.545267
pdxA UTI89_C0059 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS55625 990 - 0.556566
pdxH UTI89_C1829 pyridoxamine 5'-phosphate oxidasechromosome CDS1757512 657 - 0.51446
pdxJ UTI89_C2885 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS2842745 747 - 0.554217
pdxK UTI89_C2752 pyridoxine kinasechromosome CDS2696165 852 - 0.518779
pdxY UTI89_C1827 pyridoxamine kinasechromosome CDS1755187 864 - 0.519676
pncB UTI89_C1003 nicotinate phosphoribosyltransferasechromosome CDS993486 1251 - 0.515588
pnuC UTI89_C0748 PnuC NMN transporterchromosome CDS746344 720 + 0.483333
poxB UTI89_C0874 pyruvate dehydrogenasechromosome CDS870290 1719 - 0.531704
putP UTI89_C1079 sodium/proline symporterchromosome CDS1066236 1509 + 0.535454
ribA UTI89_C1548 GTP cyclohydrolase IIchromosome CDS1459503 654 - 0.489297
ribB UTI89_C3483 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3418555 654 - 0.530581
ribC UTI89_C1853 riboflavin synthase alpha chainchromosome CDS1778359 642 - 0.476636
ribD UTI89_C0436 diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductasechromosome CDS447699 1104 + 0.547101
ribF UTI89_C0027 riboflavin biosynthesis protein RibF; riboflavin kinase (flavokinase)chromosome CDS22934 942 + 0.529724
ribH UTI89_C0437 riboflavin synthase beta chainchromosome CDS448795 567 + 0.52381
rimK UTI89_C0855 ribosomal protein S6 modification proteinchromosome CDS853162 903 + 0.55814
serA UTI89_C3299 D-3-phosphoglycerate dehydrogenasechromosome CDS3234824 1233 - 0.522303
serC UTI89_C0978 phosphoserine aminotransferasechromosome CDS962159 1089 + 0.496786
tbpA UTI89_C0076 thiamine-binding periplasmic protein precursorchromosome CDS78163 996 - 0.513052
thiC UTI89_C3825 thiamine biosynthesis protein ThiCchromosome CDS3710211 1908 + 0.550839
thiD UTI89_C2377 phosphomethylpyrimidine kinasechromosome CDS2324474 801 - 0.546816
thiE UTI89_C3826 thiamine-phosphate pyrophosphorylasechromosome CDS3712115 639 + 0.583725
thiF UTI89_C3827 adenylyltransferase ThiFchromosome CDS3712731 771 + 0.560311
thiH UTI89_C3830 thiazole biosynthesis protein ThiHchromosome CDS3714454 1134 + 0.544974
thiL UTI89_C0440 thiamin-monophosphate kinasechromosome CDS449878 978 + 0.550102
thiM UTI89_C2378 hydroxyethylthiazole kinasechromosome CDS2325271 789 - 0.550063
thiP UTI89_C0075 thiamine transport system permease protein ThiPchromosome CDS76577 1611 - 0.580385
trpD UTI89_C1532 anthranilate synthase component IIchromosome CDS1440734 1596 - 0.563283
trpE UTI89_C1533 anthranilate synthase component Ichromosome CDS1442329 1563 - 0.542546
ubiA UTI89_C4610 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4501937 873 + 0.514318
ubiC UTI89_C4609 chorismate pyruvate lyasechromosome CDS4501427 498 + 0.524096
ubiE UTI89_C4420 ubiquinone/menaquinone biosynthesis methyltransferase ubiEchromosome CDS4305282 756 + 0.518519
ubiG UTI89_C2513 UbiG, subunit of 3-demethylubiquinone 3-methyltransferase / 2-octaprenyl-6-hydroxyphenol methylasechromosome CDS2475870 723 + 0.543568
ubiH UTI89_C3293 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3229985 1179 - 0.594572
ubiX UTI89_C2595 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2560197 570 - 0.529825
visC UTI89_C3292 protein VisCchromosome CDS3228760 1203 - 0.545303
ybbW UTI89_C0539 putative allantoin permeasechromosome CDS548375 1455 + 0.472852
ybdN UTI89_C0605 hypothetical protein YbdNchromosome CDS619211 1221 - 0.466011
ybeN UTI89_C0642 nicotinate-nucleotide adenylyltransferasechromosome CDS651782 705 - 0.489362
ybtS UTI89_C2178 putative salicylate synthetasechromosome CDS2071493 1305 - 0.551724
ycjG UTI89_C1596 hypothetical protein YcjGchromosome CDS1508185 966 + 0.540373
yfaW UTI89_C2529 hypothetical protein YfaWchromosome CDS2496229 1218 - 0.519704
ygcM UTI89_C3129 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3044894 450 + 0.475556
ygdL UTI89_C3185 putative enzymechromosome CDS3099541 807 - 0.552664
ygfA UTI89_C3298 hypothetical protein YgfAchromosome CDS3233688 747 + 0.52075
yggC UTI89_C3316 hypothetical protein YggCchromosome CDS3250201 714 - 0.521008
yggW UTI89_C3344 hypothetical protein YggWchromosome CDS3274909 1137 + 0.524186
ygiG UTI89_C3494 dihydroneopterin aldolasechromosome CDS3432031 372 - 0.508065
yiaE UTI89_C4093 putative dehydrogenasechromosome CDS3984554 987 + 0.516717
yigC UTI89_C4428 putative oxidoreductasechromosome CDS4311415 1494 + 0.534137
yjcG UTI89_C4657 putative symporter YjcGchromosome CDS4552556 1650 - 0.549697
yleB UTI89_C0660 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS669885 1176 + 0.564626
ynfK UTI89_C1780 putative dethiobiotin synthetasechromosome CDS1706954 708 - 0.521186
ynjC UTI89_C1951 hypothetical ABC transporter permease protein ynjCchromosome CDS1870649 1560 + 0.56282