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2024-05-18 10:05:22

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 146

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSON_2464 putative enzymechromosome CDS2603424 1695 - 0.466077
NA SSON_1571 hypothetical proteinchromosome CDS1650912 708 + 0.522599
NA SSON_1489 hypothetical proteinchromosome CDS1564972 306 - 0.447712
apbA SSON_0402 ApbAchromosome CDS428573 912 - 0.519737
bioA SSON_0753 7,8-diaminopelargonic acid synthetasechromosome CDS797054 1290 - 0.562016
bioB SSON_0754 biotin synthesischromosome CDS798430 1041 + 0.551393
bioD SSON_0757 dethiobiotin synthetasechromosome CDS801356 678 + 0.536873
bioF SSON_0755 8-amino-7-oxononanoate synthasechromosome CDS799467 1155 + 0.585281
birA SSON_4146 biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressorchromosome CDS4392213 966 + 0.496894
btuB SSON_4139 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS4383024 1845 + 0.501355
btuC SSON_1447 vitamin B12 transport permease proteinchromosome CDS1521504 981 + 0.552497
btuD SSON_1449 ATP-binding component of vitamin B12 transport systemchromosome CDS1523098 750 + 0.544
btuR SSON_1873 cob(I)alamin adenolsyltransferasechromosome CDS1971955 591 + 0.509306
citG SSON_0565 hypothetical proteinchromosome CDS605634 879 - 0.546075
coaA SSON_4147 pantothenate kinasechromosome CDS4393207 951 - 0.443743
cobS SSON_2053 cobalamin 5'-phosphate synthasechromosome CDS2152482 744 - 0.532258
cobT SSON_2052 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2151391 1080 - 0.524074
cobU SSON_2054 cobinamide kinase/cobinamide phosphate guanylyltransferasechromosome CDS2153222 546 - 0.509158
cysD SSON_2900 ATP-sulfurylase subunit 2chromosome CDS3039065 909 - 0.533553
cysG SSON_3499 uroporphyrinogen III methylase; sirohaeme biosynthesischromosome CDS3659827 1374 + 0.54294
cysH SSON_2915 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS3053416 735 - 0.502041
dfp SSON_3767 flavoprotein affecting synthesis of DNA and pantothenate metabolismchromosome CDS3953154 1293 - 0.530549
dxs SSON_0397 1-deoxyxylulose-5-phosphate synthase; flavoproteinchromosome CDS423284 1863 - 0.543747
entC SSON_0544 isochorismate hydroxymutase 2chromosome CDS584416 1176 + 0.562925
fecE SSON_4459 ATP-binding component of citrate-dependent iron(III) transport proteinchromosome CDS4730804 768 - 0.53776
fepC SSON_0539 ATP-binding component of ferric enterobactin transportchromosome CDS578829 816 - 0.536765
fhuC SSON_0163 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS183921 798 + 0.562657
folA SSON_0056 dihydrofolate reductase type Ichromosome CDS59159 480 + 0.53125
folC SSON_2373 dihydrofolate:folylpolyglutamate synthetasechromosome CDS2503442 1269 - 0.55792
folD SSON_0489 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS519544 867 + 0.546713
folE SSON_2209 GTP cyclohydrolase Ichromosome CDS2315802 669 - 0.505232
folK SSON_0154 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinasechromosome CDS171450 480 - 0.516667
folP SSON_3325 7,8-dihydropteroate synthasechromosome CDS3503136 894 - 0.512304
folX SSON_2360 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS2492316 363 + 0.443526
gshA SSON_2832 gamma-glutamate-cysteine ligasechromosome CDS2976107 1557 - 0.512524
gshB SSON_3101 glutathione synthetasechromosome CDS3263604 951 + 0.534175
hemA SSON_1968 enzyme in alternate path of synthesis of 5-aminolevulinatechromosome CDS2069786 1257 - 0.539379
hemB SSON_0347 5-aminolevulinate dehydratasechromosome CDS372834 1008 - 0.536706
hemC SSON_3977 porphobilinogen deaminasechromosome CDS4198963 963 - 0.554517
hemD SSON_3976 uroporphyrinogen III synthasechromosome CDS4198226 741 - 0.530364
hemE SSON_4170 uroporphyrinogen decarboxylasechromosome CDS4415928 1065 + 0.558685
hemF SSON_2525 coproporphyrinogen III oxidasechromosome CDS2661981 900 + 0.547778
hemG SSON_4023 protoporphyrin oxidasechromosome CDS4251862 546 + 0.507326
hemH SSON_0462 ferrochelatasechromosome CDS490139 963 + 0.544133
hemL SSON_0166 glutamate-1-semialdehyde aminotransferase (aminomutase)chromosome CDS187745 1281 - 0.555816
hemN SSON_4039 O2-independent coproporphyrinogen III oxidasechromosome CDS4268979 1380 + 0.531159
hemX SSON_3975 uroporphyrinogen III methylasechromosome CDS4196987 1218 - 0.541872
hemY SSON_3974 HemYchromosome CDS4195788 1197 - 0.544695
ilvB SSON_3625 valine-sensitive acetolactate synthase large subunitchromosome CDS3794112 1689 - 0.558911
ilvC SSON_3945 ketol-acid reductoisomerasechromosome CDS4167325 1476 + 0.544715
ilvE SSON_3941 branched-chain amino-acid aminotransferasechromosome CDS4161839 930 + 0.548387
ilvG SSON_3939 Acetolactate synthase II, large subunitchromosome CDS4159913 1647 + 0.544019
ilvI SSON_0084 acetolactate synthase isozyme III large subunitchromosome CDS94190 1725 + 0.527536
ispA SSON_0398 geranyltranstransferasechromosome CDS425171 900 - 0.542222
ispB SSON_3335 octaprenyl diphosphate synthasechromosome CDS3512783 972 + 0.524691
kbl SSON_3787 2-amino-3-ketobutyrate CoA ligasechromosome CDS3972135 1197 + 0.542189
kdtB SSON_3773 putative enzyme of lipopolysaccharide synthesischromosome CDS3957578 480 - 0.529167
ldhA SSON_1744 fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1849006 990 + 0.50404
lipA SSON_0582 LipAchromosome CDS620533 966 - 0.533126
lipB SSON_0584 protein of lipoate biosynthesischromosome CDS622920 576 - 0.473958
lplA SSON_4536 lipoate-protein ligase Achromosome CDS4806768 1017 - 0.576205
menA SSON_4099 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4333463 927 - 0.533981
menB SSON_2323 dihydroxynaphtoic acid synthetasechromosome CDS2451797 858 - 0.548951
menC SSON_2322 O-succinylbenzoyl-CoA synthasechromosome CDS2450835 963 - 0.58567
menD SSON_2325 2-oxoglutarate decarboxylasechromosome CDS2453424 1671 - 0.582884
menF SSON_2326 isochorismate hydroxymutase 2chromosome CDS2455183 1071 - 0.542484
menG SSON_4098 MenGchromosome CDS4332885 486 - 0.516461
metK SSON_3096 methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met geneschromosome CDS3258417 1155 + 0.532468
mhpA SSON_0297 3-(3-hydroxyphenyl)propionate hydroxylasechromosome CDS324220 1665 - 0.568168
moaA SSON_0760 molybdopterin biosynthesis, protein Achromosome CDS806130 990 + 0.539394
moaB SSON_0761 molybdopterin biosynthesis, protein Bchromosome CDS807141 513 + 0.524366
moaC SSON_0762 molybdopterin biosynthesis, protein Cchromosome CDS807656 486 + 0.561728
moaD SSON_0763 molybdopterin biosynthesischromosome CDS808134 246 + 0.569106
moaE SSON_0764 molybdopterin converting factor, subunit 2chromosome CDS808381 453 + 0.573951
mobA SSON_4029 molybdopterin-guanine dinucleotide biosynthesis protein Archromosome CDS4258407 585 - 0.499145
mobB SSON_4028 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4257898 513 - 0.48538
moeA SSON_0809 molybdopterin biosynthesischromosome CDS860382 1236 - 0.566343
moeB SSON_0808 molybdopterin biosynthesischromosome CDS859633 750 - 0.557333
mog SSON_0010 required for the efficient incorporation of molybdate into molybdoproteinschromosome CDS10082 588 + 0.537415
nadC SSON_0117 quinolinate phosphoribosyltransferasechromosome CDS126980 894 - 0.533557
nadE SSON_1418 NAD synthetasechromosome CDS1492584 828 - 0.492754
nadR SSON_4540 probable nadAB transcriptional regulatorchromosome CDS4810961 1254 + 0.504785
ospB SSO_P003 OspBpSS_046 CDS1176 867 + 0.32872
pabA SSON_3491 p-aminobenzoate synthetase, component IIchromosome CDS3652265 564 - 0.537234
pabB SSON_1348 p-aminobenzoate synthetase, component Ichromosome CDS1423168 1362 - 0.504405
pabC SSON_1116 4-amino-4-deoxychorismate lyasechromosome CDS1194591 810 + 0.504938
panB SSON_0142 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS157995 795 - 0.54717
panC SSON_0141 pantothenate synthetasechromosome CDS157132 852 - 0.530516
panD SSON_0139 aspartate 1-decarboxylasechromosome CDS155290 381 - 0.524934
panF SSON_3399 sodium/pantothenate symporterchromosome CDS3580388 1458 + 0.544582
pdxA SSON_0060 pyridoxine biosynthesischromosome CDS61763 990 - 0.563636
pdxB SSON_2378 erythronate-4-phosphate dehyrogenasechromosome CDS2508483 1137 - 0.528584
pdxH SSON_1518 pyridoxinephosphate oxidasechromosome CDS1593907 657 + 0.517504
pdxJ SSON_2688 pyridoxine biosynthesischromosome CDS2846063 732 - 0.553279
pdxK SSON_2508 pyridoxal/pyridoxine/pyridoxamine kinasechromosome CDS2646416 852 - 0.518779
pdxY SSON_1520 pyridoxal kinase 2/pyridoxine kinasechromosome CDS1596025 864 + 0.528935
pncB SSON_0934 nicotinate phosphoribosyltransferasechromosome CDS1006301 1203 - 0.512884
pnuC SSON_0703 required for NMN transportchromosome CDS745182 720 + 0.480556
poxB SSON_0857 pyruvate oxidasechromosome CDS908612 1719 - 0.541012
ribA SSON_1863 GTP cyclohydrolase IIchromosome CDS1960376 591 + 0.497462
ribB SSON_3178 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS3337321 654 - 0.527523
ribD SSON_0391 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesischromosome CDS418549 1104 + 0.558877
ribE SSON_1494 riboflavin synthase, alpha chainchromosome CDS1568735 642 + 0.475078
ribF SSON_0030 putative regulatorchromosome CDS28573 942 + 0.531847
ribH SSON_0392 riboflavin synthase, beta chainchromosome CDS419741 471 + 0.522293
rimK SSON_0837 ribosomal protein S6 modification proteinchromosome CDS888767 903 + 0.560354
serA SSON_3065 D-3-phosphoglycerate dehydrogenasechromosome CDS3227372 1233 - 0.527981
serC SSON_0908 3-phosphoserine aminotransferasechromosome CDS971922 1089 + 0.504132
tbpA SSON_0074 thiamin-binding periplasmic proteinchromosome CDS82281 984 - 0.529472
thiC SSON_4167 ThiCchromosome CDS4412415 1896 - 0.557489
thiD SSON_2151 phosphomethylpyrimidine kinasechromosome CDS2255413 801 - 0.549313
thiE SSON_4166 ThiEchromosome CDS4411780 636 - 0.580189
thiF SSON_4165 ThiFchromosome CDS4411032 738 - 0.571816
thiG SSON_4163 ThiGchromosome CDS4410076 846 - 0.57565
thiH SSON_4162 ThiHchromosome CDS4408946 1134 - 0.549383
thiL SSON_0394 thiamin-monophosphate kinasechromosome CDS420728 978 + 0.543967
thiM SSON_2152 hydoxyethylthiazole kinasechromosome CDS2256210 789 - 0.547529
thiS SSON_4164 Sulfur transfer proteinchromosome CDS4410848 201 - 0.552239
trbH SSO_P191 hypothetical proteinpSS_046 CDS168626 720 + 0.501389
trpD SSON_1880 anthranilate synthase component IIchromosome CDS1978146 1596 + 0.560777
trpE SSON_1879 anthranilate synthase component Ichromosome CDS1976584 1563 + 0.547665
ubiA SSON_4220 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4477439 873 + 0.514318
ubiB SSON_4017 ferrisiderophore reductasechromosome CDS4243972 702 + 0.518519
ubiC SSON_4219 chorismate lyasechromosome CDS4476818 609 + 0.502463
ubiE SSON_4008 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4236299 756 + 0.519841
ubiG SSON_2290 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2411744 723 + 0.543568
ubiH SSON_3060 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3222144 1179 - 0.601357
ubiX SSON_2369 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2499825 570 - 0.529825
visC SSON_3059 hypothetical proteinchromosome CDS3220919 1203 - 0.546966
yabJ SSON_0072 putative ATP-binding component of a transport systemchromosome CDS80013 699 - 0.573677
yacE SSON_0111 putative DNA repair proteinchromosome CDS121826 621 - 0.52818
ybdU SSON_0566 hypothetical proteinchromosome CDS606487 552 - 0.586957
ybeN SSON_0593 hypothetical proteinchromosome CDS631214 642 - 0.501558
ycdW SSON_1042 putative dehydrogenasechromosome CDS1125477 978 + 0.510225
ygcM SSON_2918 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3058052 366 + 0.494536
ygdL SSON_2969 putative enzymechromosome CDS3114812 807 - 0.550186
ygfA SSON_3064 putative ligasechromosome CDS3226045 549 + 0.520947
yggC SSON_3085 putative kinasechromosome CDS3248082 714 - 0.540616
yggW SSON_3109 putative oxidasechromosome CDS3268984 1137 + 0.531223
ygiG SSON_3195 putative kinasechromosome CDS3358452 372 - 0.505376
yhhU SSON_3713 hypothetical proteinchromosome CDS3890238 588 + 0.569728
yiaE SSON_3835 putative dehydrogenasechromosome CDS4027718 987 - 0.515704
yieE SSON_3556 hypothetical proteinchromosome CDS3724656 762 + 0.520997
yigC SSON_4016 putative oxidoreductasechromosome CDS4242432 1494 + 0.539491
yleB SSON_0616 hypothetical proteinchromosome CDS657206 1176 + 0.564626
yojL SSON_2272 hypothetical proteinchromosome CDS2384673 1056 - 0.530303