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2024-05-18 08:09:50

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Photorhabdus luminescens subsp. laumondii TTO1, TTO1

Number of genes found: 180

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Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA plu1743 hypothetical proteinchromosome CDS2078966 1314 - 0.453577
NA plu2522 hypothetical proteinchromosome CDS2972808 417 - 0.484412
NA plu2474 hypothetical proteinchromosome CDS2914831 597 + 0.296482
NA plu3565 hypothetical proteinchromosome CDS4200468 1275 - 0.46902
NA plu2236 hypothetical proteinchromosome CDS2630027 1236 - 0.447411
NA plu1322 hypothetical proteinchromosome CDS1536760 1668 + 0.417866
NA plu2794 hypothetical proteinchromosome CDS3317608 585 + 0.398291
NA plu2259 hypothetical proteinchromosome CDS2651780 2412 + 0.429519
NA plu1515 hypothetical proteinchromosome CDS1814537 1059 - 0.295562
NA plu3563 hypothetical proteinchromosome CDS4198009 2076 - 0.445087
NA plu2192 hypothetical proteinchromosome CDS2580119 1119 + 0.455764
NA plu4672 hypothetical proteinchromosome CDS5449216 1179 + 0.413062
NA plu0743 hypothetical proteinchromosome CDS855414 552 + 0.414855
NA plu2799 hypothetical proteinchromosome CDS3325286 543 + 0.392265
NA plu0649 hypothetical proteinchromosome CDS746074 813 + 0.458795
NA plu2086 hypothetical proteinchromosome CDS2470852 942 + 0.453291
NA plu3042 hypothetical proteinchromosome CDS3541563 948 + 0.364979
NA plu1173 hypothetical proteinchromosome CDS1357002 723 + 0.409405
NA plu1438 hypothetical proteinchromosome CDS1729837 774 + 0.447028
NA plu4181 hypothetical proteinchromosome CDS4888057 1131 - 0.501326
NA plu3307 hypothetical proteinchromosome CDS3922080 1074 - 0.443203
NA plu2936 hypothetical proteinchromosome CDS3449821 684 + 0.396199
NA plu2968 hypothetical proteinchromosome CDS3474102 786 - 0.517812
NA plu4193 hypothetical proteinchromosome CDS4907212 714 - 0.305322
NA plu4506 hypothetical proteinchromosome CDS5261647 891 + 0.410774
NA plu2965 hypothetical proteinchromosome CDS3471459 669 - 0.48281
NA plu2260 beta alanine-pyruvate transaminasechromosome CDS2654312 1332 - 0.481231
NA plu3812 riboflavin synthase subunit alphachromosome CDS4478419 666 - 0.346847
NA plu2964 hypothetical proteinchromosome CDS3470879 558 - 0.442652
NA plu1437 hypothetical proteinchromosome CDS1728044 1623 + 0.436229
NA plu0702 hypothetical proteinchromosome CDS811020 363 - 0.460055
NA plu1504 hypothetical proteinchromosome CDS1801468 1347 + 0.350408
NA plu4179 hypothetical proteinchromosome CDS4884349 1272 - 0.504717
NA plu1176 coproporphyrinogen III oxidasechromosome CDS1360760 1131 - 0.456233
NA plu3430 hypothetical proteinchromosome CDS4046151 327 - 0.458716
NA plu1699 hypothetical proteinchromosome CDS2031465 417 - 0.527578
NA plu3919 hypothetical proteinchromosome CDS4596872 1743 - 0.432588
NA plu2851 hypothetical proteinchromosome CDS3385156 801 - 0.410737
NA plu4180 hypothetical proteinchromosome CDS4885650 2406 - 0.517872
NA plu3604 hypothetical proteinchromosome CDS4253581 597 + 0.447236
NA plu2324 hypothetical proteinchromosome CDS2740058 2934 + 0.470007
NA plu4078 hypothetical proteinchromosome CDS4764608 678 - 0.429204
NA plu2793 hypothetical proteinchromosome CDS3316907 705 + 0.455319
NA plu2227 hypothetical proteinchromosome CDS2620291 708 + 0.375706
abgT plu3724 Aminobenzoyl-glutamate transport proteinchromosome CDS4389400 1527 - 0.422397
apbA plu3882 2-dehydropantoate 2-reductasechromosome CDS4559031 873 + 0.419244
apbE plu1202 Thiamine biosynthesis lipoprotein ApbE precursorchromosome CDS1385740 1029 + 0.4276
bioA plu1484 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS1776856 1272 - 0.461478
bioB plu1485 biotin synthetase (biotin synthase)chromosome CDS1778222 1038 + 0.454721
bioD plu1488 dithiobiotin synthetasechromosome CDS1781154 681 + 0.415565
bioF plu1486 8-amino-7-oxononanoate synthasechromosome CDS1779259 1152 + 0.480903
birA plu4732 biotin--protein ligasechromosome CDS5503509 960 - 0.384375
btuB plu4735 Vitamin B12 receptor precursor protein BtuBchromosome CDS5512113 1860 - 0.408602
btuC plu2662 vtamin B12-transporter permeasechromosome CDS3115997 1008 - 0.433532
btuD plu2661 vitamin B12-transporter ATPasechromosome CDS3115217 777 - 0.419562
btuR plu2451 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS2878287 597 + 0.462312
cbiA plu2999 cobyrinic acid a,c-diamide synthasechromosome CDS3499135 1383 - 0.503977
cbiC plu2997 precorrin-8X methylmutasechromosome CDS3497532 633 - 0.530806
cbiD plu2996 cobalt-precorrin-6A synthasechromosome CDS3496399 1137 - 0.525066
cbiE plu2995 precorrin-6B methylasechromosome CDS3495800 603 - 0.500829
cbiF plu2993 Precorrin-4 C11-methyltransferase (precorrin-3-methylase)chromosome CDS3494475 774 - 0.524548
cbiG plu2992 cobalamin biosynthesis protein CbiGchromosome CDS3493433 1062 - 0.516008
cbiH plu2991 precorrin-3B C17-methyltransferasechromosome CDS3492714 726 - 0.476584
cbiJ plu2990 precorrin-6x reductasechromosome CDS3491932 786 - 0.505089
cbiK plu2989 Cobalt chelatasechromosome CDS3491124 795 - 0.483019
cbiL plu2988 precorrin-2 methyltransferasechromosome CDS3490411 714 - 0.490196
cbiP plu2987 cobyric acid synthasechromosome CDS3488683 1539 - 0.48538
cbiT plu2994 precorrin-8w decarboxylasechromosome CDS3495241 570 - 0.501754
coaA plu4731 pantothenate kinasechromosome CDS5502515 951 + 0.368034
coaD plu4856 phosphopantetheine adenylyltransferasechromosome CDS5631083 486 + 0.417695
coaE plu3641 dephospho-CoA kinasechromosome CDS4289398 624 + 0.413462
cobD plu2998 cobalamin biosynthesis proteinchromosome CDS3498179 960 - 0.526042
cobS plu2985 cobalamin synthasechromosome CDS3487398 747 - 0.516734
cobT plu2980 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS3484276 1050 - 0.501905
cobU plu2986 adenosylcobinamide kinasechromosome CDS3488141 546 - 0.505495
crtE plu4337 hypothetical proteinchromosome CDS5065885 903 + 0.435216
cysD plu0709 sulfate adenylyltransferase subunit 2chromosome CDS818336 909 + 0.453245
cysG plu0708 sirohaem synthasechromosome CDS816914 1413 + 0.478415
cysH plu0705 phosphoadenosine phosphosulfate reductasechromosome CDS815178 735 + 0.42585
dfp plu4866 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS5640130 1218 + 0.481117
dxs plu3887 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS4563031 1866 + 0.450161
fecE plu4450 Iron(III) dicitrate transport ATP-binding protein FecEchromosome CDS5199888 768 + 0.5
fepC plu4626 Ferric enterobactin transport ATP-binding protein FepCchromosome CDS5392776 813 + 0.451415
folA plu0606 dihydrofolate reductasechromosome CDS689390 486 + 0.430041
folB plu3974 dihydroneopterin aldolase (DHNA)chromosome CDS4660982 354 - 0.403955
folC plu3170 FolC bifunctional protein [Includes: Folylpolyglutamate synthase (Folylpoly-gamma-glutamate synthetase) (FPGS); Dihydrofolate synthase]chromosome CDS3730018 1299 - 0.474981
folD plu4317 bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase]chromosome CDS5042175 876 - 0.471461
folE plu1543 GTP cyclohydrolase Ichromosome CDS1846362 660 + 0.45
folK plu0873 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokina sechromosome CDS999913 516 - 0.455426
folP plu4534 Dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase)chromosome CDS5295883 846 - 0.42435
fre plu4404 NAD(P)H-flavin reductasechromosome CDS5152827 702 - 0.430199
gshA plu1252 glutamate--cysteine ligasechromosome CDS1449935 1560 + 0.421795
gshB plu1184 glutathione synthetasechromosome CDS1366819 951 - 0.457413
hemA plu2069 glutamyl-tRNA reductasechromosome CDS2450871 1263 + 0.463183
hemB plu4407 delta-aminolevulinic acid dehydratasechromosome CDS5156176 1014 - 0.453649
hemC plu4644 porphobilinogen deaminasechromosome CDS5413407 942 + 0.488323
hemD plu4645 uroporphyrinogen-III synthetasechromosome CDS5414345 741 + 0.445344
hemE plu0489 uroporphyrinogen decarboxylasechromosome CDS529034 1065 + 0.473239
hemF plu1383 coproporphyrinogen III oxidasechromosome CDS1663139 909 - 0.405941
hemG plu4398 protoporphyrinogen oxidase (PPO)chromosome CDS5145111 537 - 0.376164
hemH plu3835 ferrochelatase (protoheme ferro-lyase) (heme synthetase)chromosome CDS4506210 978 - 0.398773
hemL plu0902 glutamate-1-semialdehyde aminotransferasechromosome CDS1036929 1284 - 0.490654
hemN plu0230 coproporphyrinogen III oxidasechromosome CDS239949 1374 + 0.424309
hemX plu4646 uroporphyrin-III C-methyltransferase (urogen III methylase)chromosome CDS5415106 1125 + 0.430222
hemY plu4647 HemY proteinchromosome CDS5416234 1239 + 0.439871
ilvC plu4668 ketol-acid reductoisomerasechromosome CDS5443372 1479 - 0.462475
ilvE plu4683 branched-chain amino acid aminotransferasechromosome CDS5462063 927 - 0.445523
ilvG plu4685 acetolactate synthase II large subunitchromosome CDS5463267 1647 - 0.448695
ilvI plu3666 acetolactate synthase III large subunitchromosome CDS4315576 1728 - 0.445023
ispA plu3886 geranyltranstransferase (farnesyl-diphosphate synthase) FPP synthase)chromosome CDS4562051 918 + 0.444444
ispB plu4543 octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase)chromosome CDS5304535 972 + 0.434156
kbl plu4846 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS5619769 1197 - 0.450292
ldhA plu2145 D-lactate dehydrogenasechromosome CDS2527112 1005 - 0.414925
lipA plu1291 lipoyl synthasechromosome CDS1499979 966 - 0.480331
lipB plu1292 lipoyltransferasechromosome CDS1501055 666 - 0.436937
menA plu4764 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS5546601 918 + 0.444444
menB plu3071 naphthoate synthasechromosome CDS3579838 858 - 0.454545
menC plu3070 O-succinylbenzoate synthasechromosome CDS3578867 972 - 0.495885
menD plu3073 2-oxoglutarate decarboxylasechromosome CDS3581470 1695 - 0.477286
menF plu3074 menaquinone-specific isochorismate synthasechromosome CDS3583269 1320 - 0.475
menG plu4765 ribonuclease activity regulator protein RraAchromosome CDS5547668 510 + 0.460784
metK plu3683 S-adenosylmethionine synthetasechromosome CDS4338372 1173 + 0.45439
moaA plu1499 molybdenum cofactor biosynthesis protein Achromosome CDS1797662 984 + 0.450203
moaC plu1500 molybdenum cofactor biosynthesis protein Cchromosome CDS1798685 480 + 0.470833
moaD plu1501 molybdopterin [mpt] converting factor, subunit 1 (molybdenum cofactor biosynthesis protein D) (molybdopterin converting factor small subunit)chromosome CDS1799161 246 + 0.463415
moaE plu1502 molybdopterin [MPT] converting factor, subunit 2 (molybdenum cofactor biosynthesis protein E) (molybdopterin converting factor large subunit)chromosome CDS1799410 453 + 0.479029
mobA plu0379 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS408768 600 - 0.421667
mobB plu0378 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS408253 519 - 0.433526
moeA plu1540 molybdopterin biosynthesis proteinchromosome CDS1842287 1242 - 0.460548
moeB plu1539 molybdopterin biosynthesis protein MoeBchromosome CDS1841535 753 - 0.456839
mogA plu0569 molybdenum cofactor biosynthesis proteinchromosome CDS645031 576 + 0.489583
nadA plu1468 quinolinate synthetasechromosome CDS1761308 1041 + 0.445725
nadB plu3347 L-aspartate oxidasechromosome CDS3974162 1605 + 0.466044
nadC plu3637 nicotinate-nucleotide pyrophosphorylasechromosome CDS4284984 891 + 0.414141
nadD plu1300 nicotinic acid mononucleotide adenyltransferasechromosome CDS1508573 678 - 0.457227
nadR plu0553 nicotinamide-nucleotide adenylyltransferasechromosome CDS624264 1257 + 0.407319
paaK plu3041 Phenylacetate-coenzyme A ligase (Phenylacetyl-CoA ligase) (PA-CoA ligase)chromosome CDS3540163 1404 + 0.378917
pabA plu0393 para-aminobenzoate synthase component IIchromosome CDS424719 576 + 0.427083
pabB plu2694 para-aminobenzoate synthase component Ichromosome CDS3195005 1371 + 0.417214
pabC plu2830 4-amino-4-deoxychorismate lyasechromosome CDS3360377 825 - 0.412121
panB plu0872 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS999051 792 - 0.445707
panC plu0871 pantoate--beta-alanine ligasechromosome CDS998170 855 - 0.453801
panD plu0870 aspartate 1-decarboxylase precursorchromosome CDS997722 381 - 0.454068
panF plu4086 sodium/panthothenate symporterchromosome CDS4773046 1452 + 0.479339
pcnB plu1754 nicotinate phosphoribosyltransferasechromosome CDS2092860 1215 - 0.443621
pdxA plu0610 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS691950 1020 - 0.470588
pdxB plu3175 erythronate-4-phosphate dehydrogenasechromosome CDS3734990 1128 - 0.453014
pdxH plu2597 pyridoxamine 5'-phosphate oxidasechromosome CDS3040318 654 - 0.426605
pdxJ plu3337 pyridoxal phosphate biosynthetic proteinchromosome CDS3964859 732 - 0.441257
pdxY plu2595 pyridoxine kinasechromosome CDS3037746 864 - 0.445602
pnuC plu1469 Protein PnuCchromosome CDS1762525 726 + 0.387052
ribA plu2431 GTP cyclohydrolase II proteinchromosome CDS2851997 609 + 0.412151
ribB plu3963 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS4648636 654 - 0.469419
ribD plu3899 riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase); 5-amino-6-(5-phosphochromosome CDS4570883 1110 - 0.482883
ribE plu2610 riboflavin synthase subunit alphachromosome CDS3053334 678 - 0.415929
ribF plu0590 hypothetical proteinchromosome CDS670993 945 + 0.440212
ribH plu3898 riboflavin synthase subunit betachromosome CDS4570286 471 - 0.469214
serA plu3605 D-3-phosphoglycerate dehydrogenase (PGDH)chromosome CDS4254226 1242 - 0.433172
serC plu1619 phosphoserine aminotransferasechromosome CDS1934211 1089 + 0.439853
tbpA plu0619 Thiamine-binding periplasmic protein precursorchromosome CDS704606 1014 - 0.45858
thiC plu0486 thiamine biosynthesis protein ThiCchromosome CDS524964 1938 - 0.479876
thiD plu2782 phosphomethylpyrimidine kinasechromosome CDS3303156 798 - 0.483709
thiE plu0485 thiamine-phosphate pyrophosphorylasechromosome CDS524330 651 - 0.488479
thiF plu0484 thiamine biosynthesis protein ThiFchromosome CDS523570 750 - 0.48
thiG plu0482 thiazole synthasechromosome CDS522604 768 - 0.485677
thiH plu0481 thiamine biosynthesis protein ThiHchromosome CDS521465 1092 - 0.458791
thiL plu3896 thiamine monophosphate kinasechromosome CDS4568753 990 - 0.458586
thiQ plu0617 Thiamine transport ATP-binding proteinchromosome CDS702326 708 - 0.460452
thiS plu0483 sulfur carrier protein ThiSchromosome CDS523373 201 - 0.422886
trpE plu2462 anthranilate synthase component Ichromosome CDS2901650 1575 + 0.467937
trpG plu2463 Anthranilate synthase component II (Glutamine amido-transferase)chromosome CDS2903224 579 + 0.435233
ubiA plu4377 4-hydroxybenzoate octaprenyltransferasechromosome CDS5109931 867 - 0.441753
ubiC plu4378 Chorismate--pyruvate lyasechromosome CDS5110820 519 - 0.43738
ubiD plu4405 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (Polyprenyl p-hydroxybenzoate decarboxylase)chromosome CDS5153539 1482 - 0.447368
ubiE plu4413 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS5161313 756 - 0.424603
ubiF plu1313 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS1522956 1182 + 0.472081
ubiG plu3051 3-demethylubiquinone-9 3-methyltransferasechromosome CDS3555482 723 + 0.46473
ubiH plu3600 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS4249603 1179 - 0.476675
ubiX plu3166 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3726461 585 - 0.454701
visC plu3599 hypothetical proteinchromosome CDS4248344 1221 - 0.475839