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2024-05-18 10:05:09

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2

Number of genes found: 165

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Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t3939 hypothetical proteinchromosome CDS4079396 579 - 0.587219
NA t0168 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS194590 984 + 0.551829
NA t2979 hypothetical proteinchromosome CDS3070370 549 + 0.579235
NA t0680 salicylate hydroxylasechromosome CDS765390 1194 + 0.592127
NA t0709 hydroxyethylthiazole kinasechromosome CDS796508 798 + 0.609023
NA t2850 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2927670 363 + 0.523416
NA t3385 putative membrane transport proteinchromosome CDS3487624 732 - 0.505464
NA t2974 hypothetical proteinchromosome CDS3065154 1203 - 0.570241
NA t0452 putative decarboxylasechromosome CDS522062 1653 + 0.592256
NA t0419 hypothetical proteinchromosome CDS492928 378 - 0.492063
NA t2823 hypothetical proteinchromosome CDS2899216 1428 + 0.551821
NA t2116 ABC transporter ATP-binding proteinchromosome CDS2180221 777 - 0.563707
NA t2895 hypothetical proteinchromosome CDS2980276 807 - 0.556382
NA t3016 coproporphyrinogen III oxidasechromosome CDS3104293 1137 + 0.547054
NA t0284 2-dehydropantoate 2-reductasechromosome CDS321370 918 + 0.489107
NA t2444 thiamine monophosphate kinasechromosome CDS2515890 978 - 0.564417
NA t1785 putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic regionchromosome CDS1844904 939 - 0.549521
NA t2822 possible decarboxylasechromosome CDS2898623 594 + 0.579125
apbA t2430 2-dehydropantoate 2-reductasechromosome CDS2501201 912 + 0.527412
asrB t0307 anaerobic sulfite reductase subunit Bchromosome CDS352429 819 - 0.553114
bioA t2094 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS2156398 1290 + 0.581395
bioB t2093 biotin synthetasechromosome CDS2155271 1041 - 0.550432
bioD t1410 dithiobiotin synthetasechromosome CDS1454879 696 + 0.518678
bioD t2090 dithiobiotin synthetasechromosome CDS2152699 687 - 0.590975
bioF t2092 8-amino-7-oxononanoate synthasechromosome CDS2154117 1158 - 0.603627
birA t3488 biotin--protein ligasechromosome CDS3578209 963 - 0.496366
btuB t3495 vitamin B12 receptor proteinchromosome CDS3586907 1845 - 0.517073
btuC t1221 vtamin B12-transporter permeasechromosome CDS1288014 981 + 0.594292
btuD t1223 vitamin B12-transporter ATPasechromosome CDS1289637 750 + 0.569333
btuR t1631 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1690602 591 + 0.538071
cbiA t0840 cobyrinic acid a,c-diamide synthasechromosome CDS933507 1425 + 0.557895
cbiD t0842 cobalt-precorrin-6A synthasechromosome CDS936377 1140 + 0.557018
cbiE t0843 precorrin-6B methylasechromosome CDS937510 606 + 0.580858
cbiF t0845 precorrin-4 C11-methyltransferasechromosome CDS938667 774 + 0.573643
cbiG t0846 cobalamin biosynthesis protein CbiGchromosome CDS939421 1056 + 0.553977
cbiH t0847 precorrin-3B C17-methyltransferasechromosome CDS940476 726 + 0.566116
cbiL t0850 precorrin-2 methyltransferasechromosome CDS942781 714 + 0.578431
cbiP t0855 cobyric acid synthasechromosome CDS945995 1521 + 0.558843
cbiT t0844 precorrin-8w decarboxylasechromosome CDS938105 579 + 0.561313
citG t0065 CitG proteinchromosome CDS72925 909 + 0.547855
citG t2248 CitG proteinchromosome CDS2312898 897 + 0.604236
citX t2247 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS2312507 420 + 0.628571
citX t0064 citx proteinchromosome CDS72396 552 + 0.559783
coaA t3487 pantothenate kinasechromosome CDS3577224 951 + 0.457413
coaD t3793 phosphopantetheine adenylyltransferasechromosome CDS3912693 480 - 0.53125
coaE t0146 dephospho-CoA kinasechromosome CDS166345 621 - 0.542673
cobD t0839 cobalamin biosynthesis proteinchromosome CDS934928 960 + 0.595833
cobS t0857 cobalamin synthasechromosome CDS948054 744 + 0.568548
cobT t0858 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS948824 1071 + 0.591036
cobU t0856 adenosylcobinamide kinasechromosome CDS947512 546 + 0.549451
cysD t2836 sulfate adenylyltransferase subunit 2chromosome CDS2909821 909 - 0.525853
cysG t4028 siroheme synthasechromosome CDS4185438 1374 - 0.574964
cysH t2847 phosphoadenosine phosphosulfate reductasechromosome CDS2922913 735 - 0.559184
dfp t3788 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3909055 1224 - 0.54902
dxs t2441 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS2512400 1863 + 0.551261
entC t2273 isochorismate synthasechromosome CDS2339553 1170 - 0.588889
fepC t2278 ferric enterobactin transport ATP-binding protein FepCchromosome CDS2345403 795 + 0.567296
fhuC t0200 ferrichrome transport ATP-binding protein FhuCchromosome CDS230378 798 + 0.590226
fimY t2313 fimbriae Y proteinchromosome CDS2376929 723 + 0.46473
folA t0090 dihydrofolate reductase type Ichromosome CDS100644 480 + 0.535417
folB t3126 dihydroneopterin aldolasechromosome CDS3214482 363 - 0.495868
folC t0499 folylpolyglutamate synthasechromosome CDS571070 1269 + 0.583136
folD t2321 methenyltetrahydrofolate cyclohydrolasechromosome CDS2385571 867 + 0.547866
folE t0662 GTP cyclohydrolase Ichromosome CDS747245 669 + 0.521674
folK t0191 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS217797 480 - 0.579167
folP t3212 dihydropteroate synthasechromosome CDS3303755 849 - 0.534747
gshA t2715 glutamate--cysteine ligasechromosome CDS2805687 1557 - 0.518304
gshB t3007 glutathione synthetasechromosome CDS3098120 948 + 0.541139
hemA t1099 glutamyl-tRNA reductasechromosome CDS1183820 1257 + 0.570406
hemB t2492 delta-aminolevulinic acid dehydratasechromosome CDS2564886 975 + 0.551795
hemC t3359 porphobilinogen deaminasechromosome CDS3460640 942 + 0.584926
hemD t3360 uroporphyrinogen-III synthetasechromosome CDS3461578 741 + 0.568151
hemE t3464 uroporphyrinogen decarboxylasechromosome CDS3552984 1065 - 0.580282
hemF t0407 coproporphyrinogen III oxidasechromosome CDS482393 900 - 0.564444
hemG t3311 protoporphyrinogen oxidasechromosome CDS3409480 546 - 0.501832
hemH t2371 ferrochelatasechromosome CDS2440199 963 - 0.56594
hemL t0203 glutamate-1-semialdehyde aminotransferasechromosome CDS234210 1281 - 0.589383
hemN t3617 coproporphyrinogen III oxidasechromosome CDS3718445 1374 - 0.518923
hemX t3361 uroporphyrinogen III methylasechromosome CDS3462340 1170 + 0.555556
hemY t3362 porphyrin biosynthetic proteinchromosome CDS3463509 1200 + 0.578333
ilvB t3722 acetolactate synthase large subunitchromosome CDS3836613 1689 + 0.560687
ilvC t3389 ketol-acid reductoisomerasechromosome CDS3490391 1476 - 0.558266
ilvE t3395 branched-chain amino acid aminotransferasechromosome CDS3497411 930 - 0.547312
ilvG t3397 acetolactate synthase II large subunitchromosome CDS3498618 1647 - 0.559806
ilvI t0120 acetolactate synthase III large subunitchromosome CDS137241 1725 + 0.545507
ispA t2440 geranyltranstransferasechromosome CDS2511477 900 + 0.573333
ispB t3222 octaprenyl-diphosphate synthasechromosome CDS3313366 972 + 0.533951
kbl t3810 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3929522 1197 + 0.559733
ldhA t1550 D-lactate dehydrogenasechromosome CDS1607545 990 + 0.510101
lipA t2234 lipoyl synthasechromosome CDS2300481 966 + 0.547619
lipB t2232 lipoyltransferasechromosome CDS2298445 576 + 0.494792
lplA t4615 lipoate-protein ligase Achromosome CDS4766131 1017 - 0.571288
menA t3528 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS3632011 930 + 0.551613
menB t0556 naphthoate synthasechromosome CDS632265 858 + 0.566434
menC t0557 O-succinylbenzoate synthasechromosome CDS633122 963 + 0.603323
menD t0554 2-oxoglutarate decarboxylasechromosome CDS629825 1671 + 0.59605
menF t0553 menaquinone-specific isochorismate synthasechromosome CDS628444 1296 + 0.568673
menG t3529 ribonuclease activity regulator protein RraAchromosome CDS3633033 486 + 0.547325
metK t3002 S-adenosylmethionine synthetasechromosome CDS3092872 1155 + 0.541991
moaA t2085 molybdenum cofactor biosynthesis protein Achromosome CDS2144884 990 - 0.537374
moaB t2084 molybdenum cofactor biosynthesis protein Bchromosome CDS2144350 513 - 0.557505
moaC t2083 molybdenum cofactor biosynthesis protein Cchromosome CDS2143862 486 - 0.541152
moaD t2082 molybdopterin converting factor, subunit 1chromosome CDS2143624 252 - 0.575397
moaE t2081 molybdopterin converting factor, subunit 2chromosome CDS2143170 453 - 0.611479
mobA t3626 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS3728210 585 + 0.547009
mobB t3627 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3728791 516 + 0.503876
moeA t2043 molybdopterin biosynthesis MoeA proteinchromosome CDS2101792 1242 + 0.574879
moeB t2044 molybdopterin biosynthesis protein MoeBchromosome CDS2103033 750 + 0.573333
mogA t0008 molybdenum cofactor biosynthesis proteinchromosome CDS8729 591 + 0.560068
nadA t2122 quinolinate synthetasechromosome CDS2185777 1044 - 0.543103
nadB t0269 L-aspartate oxidasechromosome CDS307196 1623 - 0.552064
nadC t0151 nicotinate-nucleotide pyrophosphorylasechromosome CDS171511 894 - 0.577181
nadD t2222 nicotinic acid mononucleotide adenyltransferasechromosome CDS2288835 642 + 0.542056
nadE t1189 NAD(+) synthetasechromosome CDS1257996 828 - 0.530193
nadR t4619 nicotinamide-nucleotide adenylyltransferasechromosome CDS4770527 1233 + 0.509327
pabA t4036 para-aminobenzoate synthase component IIchromosome CDS4193927 564 + 0.554965
pabB t1053 para-aminobenzoate synthase component Ichromosome CDS1136998 1365 - 0.551648
pabC t1722 4-amino-4-deoxychorismate lyasechromosome CDS1788904 810 - 0.514815
panB t0183 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS209351 795 - 0.586164
panC t0182 pantoate--beta-alanine ligasechromosome CDS208371 855 - 0.547368
panD t0181 aspartate 1-decarboxylase precursorchromosome CDS207896 381 - 0.545932
panF t3297 sodium/panthothenate symporterchromosome CDS3391363 1452 + 0.548898
pdxA t0094 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS103276 990 - 0.587879
pdxB t0494 erythronate-4-phosphate dehydrogenasechromosome CDS566201 1137 + 0.568162
pdxH t1316 pyridoxamine 5'-phosphate oxidasechromosome CDS1377110 657 + 0.543379
pdxJ t0279 pyridoxal phosphate biosynthetic proteinchromosome CDS317589 732 + 0.576503
pdxK t0423 pyridoxine kinasechromosome CDS495473 867 + 0.567474
pdxY t1318 pyridoxine kinasechromosome CDS1379227 687 + 0.544396
pilO t4243 putative pilus assembly proteinchromosome CDS4411887 1296 + 0.565586
pncB t1930 nicotinate phosphoribosyltransferasechromosome CDS1972525 1203 + 0.541147
pnuC t2121 pnuC proteinchromosome CDS2185033 720 - 0.5
poxB t1998 pyruvate dehydrogenasechromosome CDS2057552 1719 + 0.570681
rfbI t0779 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS870827 975 + 0.408205
ribA t1624 GTP cyclohydrolase II proteinchromosome CDS1679584 591 + 0.502538
ribB t3115 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3200849 654 - 0.559633
ribD t2447 riboflavin biosynthesis protein RibDchromosome CDS2517945 1104 - 0.599638
ribE t1294 riboflavin synthase subunit alphachromosome CDS1357958 642 + 0.514019
ribF t0047 hypothetical proteinchromosome CDS52869 939 + 0.565495
ribH t2446 riboflavin synthase subunit betachromosome CDS2517386 471 - 0.541401
rimK t2021 ribosomal protein S6 modification proteinchromosome CDS2079201 903 - 0.563677
serA t2980 D-3-phosphoglycerate dehydrogenasechromosome CDS3071299 1233 - 0.553934
serC t1957 phosphoserine aminotransferasechromosome CDS2008003 1089 - 0.534435
tbpA t0112 thiamine-binding periplasmic protein precursorchromosome CDS127093 984 - 0.551829
thiC t3467 thiamine biosynthesis protein ThiCchromosome CDS3555807 1896 + 0.58808
thiD t0710 phosphomethylpyrimidine kinasechromosome CDS797292 801 + 0.601748
thiE t3468 thiamine-phosphate pyrophosphorylasechromosome CDS3557702 636 + 0.597484
thiF t3469 thiamine biosynthesis protein ThiFchromosome CDS3558330 759 + 0.57971
thiG t3471 thiazole synthasechromosome CDS3559271 771 + 0.618677
thiH t3472 thiamine biosynthesis protein ThiHchromosome CDS3560038 1134 + 0.551146
thiS t3470 sulfur carrier protein ThiSchromosome CDS3559096 174 + 0.586207
trpD t1636 anthranilate phosphoribosyltransferasechromosome CDS1695587 1596 + 0.569549
trpE t1635 anthranilate synthase component Ichromosome CDS1694025 1563 + 0.583493
ubiA t4140 4-hydroxybenzoate octaprenyltransferasechromosome CDS4284982 873 + 0.546392
ubiB t3318 NAD(P)H-flavin reductasechromosome CDS3419298 702 - 0.524217
ubiC t4139 chorismate lyasechromosome CDS4284471 498 + 0.544177
ubiE t3327 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS3427115 756 - 0.482804
ubiG t0588 3-demethylubiquinone-9 3-methyltransferasechromosome CDS666007 729 - 0.547325
ubiX t0508 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS582541 570 + 0.552632
visB t2975 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3066485 1179 - 0.606446
yabJ t0110 hypothetical ABC transporterchromosome CDS124816 708 - 0.583333
yiaE t3873 2-hydroxyacid dehydrogenasechromosome CDS3999261 975 - 0.570256
yieE t3674 hypothetical proteinchromosome CDS3782854 756 - 0.531746
yigC t3319 hypothetical proteinchromosome CDS3420085 1479 - 0.538202
yleB t2202 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS2267097 1176 - 0.602041
yojL t0598 thiamine biosynthesis proteinchromosome CDS682434 1053 + 0.566002