Gene list
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COG category: Coenzyme transport and metabolism
Organism: Yersinia pestis KIM, KIM
Number of genes found: 139
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia pestis KIM, KIM | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | y0666 | hypothetical protein | chromosome | CDS | 751439 | 264 | - | 0.409091 |
NA | Y1104 | putative porphyrin biosynthetic enzyme | pMT-1 | CDS | 85075 | 2367 | + | 0.52049 |
NA | y0055 | hypothetical protein | chromosome | CDS | 67548 | 714 | + | 0.540616 |
NA | y2330 | hypothetical protein | chromosome | CDS | 2566128 | 1110 | - | 0.526126 |
NA | y1072 | O-antigen synthesis protein, WbyH | chromosome | CDS | 1207504 | 1284 | + | 0.352804 |
NA | y3402 | hypothetical protein | chromosome | CDS | 3765258 | 1485 | + | 0.482828 |
NA | y0461 | oxidoreductase | chromosome | CDS | 511092 | 1521 | + | 0.487837 |
NA | y2111 | hypothetical protein | chromosome | CDS | 2328250 | 693 | + | 0.434343 |
NA | y3093 | permease | chromosome | CDS | 3403208 | 1359 | + | 0.491538 |
NA | y0957 | hypothetical protein | chromosome | CDS | 1077906 | 1083 | + | 0.481994 |
NA | y2896 | dehydrogenase | chromosome | CDS | 3200770 | 966 | + | 0.600414 |
NA | y2837 | ABC transport protein | chromosome | CDS | 3139448 | 786 | - | 0.521628 |
NA | y1196 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | chromosome | CDS | 1340586 | 1182 | + | 0.534687 |
NA | y3300 | ligase | chromosome | CDS | 3632309 | 597 | + | 0.517588 |
NA | y0817 | 6-pyruvoyl tetrahydrobiopterin synthase | chromosome | CDS | 916079 | 366 | - | 0.469945 |
NA | y2336 | hypothetical protein | chromosome | CDS | 2570885 | 1971 | + | 0.468798 |
NA | y4096 | 2-hydroxyacid dehydrogenase | chromosome | CDS | 4544627 | 1017 | + | 0.508358 |
NA | y3270 | hypothetical protein | chromosome | CDS | 3599766 | 282 | + | 0.507092 |
NA | y1651 | hypothetical protein | chromosome | CDS | 1824719 | 951 | + | 0.480547 |
NA | y3158 | enzyme | chromosome | CDS | 3469308 | 828 | - | 0.4843 |
NA | y3531 | kinase | chromosome | CDS | 3916409 | 363 | - | 0.501377 |
NA | y3332 | coproporphyrinogen III oxidase | chromosome | CDS | 3664225 | 1143 | + | 0.492563 |
NA | y0554 | hypothetical protein | chromosome | CDS | 621131 | 1062 | - | 0.490584 |
NA | y0547 | coproporphyrinogen III oxidase | chromosome | CDS | 613493 | 1314 | - | 0.509893 |
apbA | y1014 | 2-dehydropantoate 2-reductase | chromosome | CDS | 1141697 | 912 | - | 0.464912 |
ascD | y1067 | CDP-6-deoxy-delta-3,4-glucoseen reductase | chromosome | CDS | 1202399 | 990 | + | 0.374747 |
bioA | y3032 | adenosylmethionine--8-amino-7-oxononanoate transaminase | chromosome | CDS | 3339833 | 1281 | + | 0.533958 |
bioB | y3031 | biotin synthetase | chromosome | CDS | 3338697 | 1038 | - | 0.510597 |
bioD | y3028 | dithiobiotin synthetase | chromosome | CDS | 3336044 | 738 | - | 0.539295 |
bioF | y3030 | 8-amino-7-oxononanoate synthase | chromosome | CDS | 3337546 | 1152 | - | 0.580729 |
birA | y0472 | biotin--protein ligase | chromosome | CDS | 529088 | 960 | + | 0.40625 |
btuB | y0325 | outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23 | chromosome | CDS | 352703 | 1962 | + | 0.469419 |
btuC | y1914 | vtamin B12-transporter permease | chromosome | CDS | 2107432 | 1077 | + | 0.486537 |
btuD | y1916 | vitamin B12-transporter ATPase | chromosome | CDS | 2109154 | 762 | + | 0.469816 |
btuR | y2055 | cob(I)yrinic acid a,c-diamide adenosyltransferase | chromosome | CDS | 2263909 | 591 | - | 0.497462 |
coaA | y0473 | pantothenate kinase | chromosome | CDS | 530082 | 951 | - | 0.398528 |
coaE | y0757 | dephospho-CoA kinase | chromosome | CDS | 843371 | 621 | - | 0.470209 |
cysD | y0823 | sulfate adenylyltransferase subunit 2 | chromosome | CDS | 924169 | 909 | + | 0.491749 |
cysG | y3941 | uroporphyrinogen III methylase | chromosome | CDS | 4395216 | 1449 | - | 0.529331 |
dfp | y0093 | phosphopantothenoylcysteine synthase/decarboxylase | chromosome | CDS | 99711 | 1332 | + | 0.476727 |
dxs | y1008 | 1-deoxy-D-xylulose-5-phosphate synthase | chromosome | CDS | 1136081 | 1860 | - | 0.489247 |
fhuC | y0796 | ATP-binding component of hydroxymate-dependent iron ABC transporter | chromosome | CDS | 890477 | 795 | + | 0.543396 |
folA | y3688 | dihydrofolate reductase type I | chromosome | CDS | 4099022 | 483 | - | 0.486542 |
folC | y1602 | dihydrofolate:folylpolyglutamate synthetase | chromosome | CDS | 1771007 | 1383 | + | 0.532176 |
folD | y1110 | 5,10-methylene-tetrahydrofolate dehydrogenase | chromosome | CDS | 1248325 | 867 | - | 0.514418 |
folE | y2664 | GTP cyclohydrolase I | chromosome | CDS | 2938298 | 717 | - | 0.456067 |
folK | y0787 | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase | chromosome | CDS | 879625 | 480 | - | 0.529167 |
folP | y0683 | 7,8-dihydropteroate synthase | chromosome | CDS | 766683 | 834 | + | 0.476019 |
gshA | y0887 | glutamate--cysteine ligase | chromosome | CDS | 997588 | 1599 | + | 0.481551 |
gshB | y3321 | glutathione synthetase | chromosome | CDS | 3655274 | 960 | + | 0.491667 |
hemA | y2291 | glutamyl-tRNA reductase | chromosome | CDS | 2527649 | 1317 | - | 0.501898 |
hemB | y0459 | delta-aminolevulinic acid dehydratase | chromosome | CDS | 509248 | 1023 | + | 0.477028 |
hemC | y0381 | porphobilinogen deaminase | chromosome | CDS | 425084 | 1110 | - | 0.525225 |
hemD | y0380 | uroporphyrinogen-III synthetase | chromosome | CDS | 424338 | 750 | - | 0.512 |
hemE | y0496 | uroporphyrinogen decarboxylase | chromosome | CDS | 557874 | 1068 | + | 0.512172 |
hemF | y1451 | coproporphyrinogen III oxidase | chromosome | CDS | 1608645 | 930 | - | 0.533333 |
hemG | y0469 | protoporphyrin oxidase | chromosome | CDS | 521384 | 534 | + | 0.428839 |
hemH | y1066 | ferrochelatase | chromosome | CDS | 1200839 | 963 | + | 0.457944 |
hemL | y0799 | glutamate-1-semialdehyde aminotransferase | chromosome | CDS | 894727 | 1281 | - | 0.508977 |
hemN | y3807 | coproporphyrinogen III oxidase | chromosome | CDS | 4228457 | 1380 | - | 0.477536 |
hemX | y0379 | uroporphyrinogen III methylase | chromosome | CDS | 423183 | 1134 | - | 0.506173 |
hemY | y0378 | hemY protein | chromosome | CDS | 421960 | 1221 | - | 0.525798 |
ilvB | y2126 | acetolactate synthase large subunit | chromosome | CDS | 2346815 | 1683 | + | 0.498515 |
ilvC | y0345 | ketol-acid reductoisomerase | chromosome | CDS | 381832 | 1479 | + | 0.503043 |
ilvE | y0337 | branched-chain amino acid aminotransferase | chromosome | CDS | 372461 | 1002 | + | 0.511976 |
ilvG | y0336 | acetolactate synthase II large subunit | chromosome | CDS | 370613 | 1647 | + | 0.532483 |
ilvI | y3640 | acetolactate synthase III large subunit | chromosome | CDS | 4034795 | 1782 | - | 0.497194 |
ispA | y1009 | geranyltranstransferase | chromosome | CDS | 1138096 | 921 | - | 0.505972 |
ispB | y0671 | octaprenyl diphosphate synthase | chromosome | CDS | 755300 | 972 | - | 0.489712 |
kbl | y0081 | 2-amino-3-ketobutyrate coenzyme A ligase | chromosome | CDS | 89982 | 1242 | - | 0.500805 |
kdtB | y0088 | phosphopantetheine adenylyltransferase | chromosome | CDS | 96908 | 480 | + | 0.4625 |
ldhA | y2004 | D-lactate dehydrogenase | chromosome | CDS | 2205964 | 1050 | - | 0.449524 |
lipA | y1171 | lipoyl synthase | chromosome | CDS | 1315206 | 966 | - | 0.501035 |
lipB | y1173 | lipoyltransferase | chromosome | CDS | 1316364 | 702 | - | 0.490029 |
lplA | y1926 | lipoate-protein ligase A | chromosome | CDS | 2118545 | 1017 | + | 0.450344 |
menA | y0293 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase, | chromosome | CDS | 311719 | 930 | - | 0.488172 |
menB | y1662 | naphthoate synthase | chromosome | CDS | 1837037 | 867 | + | 0.516724 |
menC | y1663 | O-succinylbenzoate synthase | chromosome | CDS | 1837903 | 972 | + | 0.569959 |
menD | y1660 | 2-oxoglutarate decarboxylase | chromosome | CDS | 1834514 | 1704 | + | 0.569836 |
menF | y1659 | menaquinone-specific isochorismate synthase | chromosome | CDS | 1832913 | 1374 | + | 0.5131 |
menG | y0292 | ribonuclease activity regulator protein RraA | chromosome | CDS | 311092 | 486 | - | 0.475309 |
metK | y3314 | S-adenosylmethionine synthetase | chromosome | CDS | 3651592 | 1155 | + | 0.497835 |
moaA | y3023 | molybdenum cofactor biosynthesis protein A | chromosome | CDS | 3328974 | 1026 | - | 0.491228 |
moaC | y3021 | molybdenum cofactor biosynthesis protein C | chromosome | CDS | 3328394 | 483 | - | 0.532091 |
moaD | y3020 | molybdopterin biosynthesis protein | chromosome | CDS | 3328152 | 246 | - | 0.528455 |
moaE | y3019 | molybdopterin converting factor, subunit 2 | chromosome | CDS | 3327697 | 459 | - | 0.542484 |
mobA | y3815 | molybdopterin-guanine dinucleotide biosynthesis protein A | chromosome | CDS | 4238480 | 642 | + | 0.433022 |
mobB | y3816 | molybdopterin-guanine dinucleotide biosynthesis protein B | chromosome | CDS | 4239094 | 558 | + | 0.408602 |
moeA | y2673 | molybdopterin biosynthesis protein | chromosome | CDS | 2950278 | 1275 | + | 0.499608 |
moeB | y2674 | molybdopterin biosynthesis protein MoeB | chromosome | CDS | 2951524 | 801 | + | 0.496879 |
mogA | y3710 | molybdenum cofactor biosynthesis protein | chromosome | CDS | 4126571 | 588 | - | 0.45068 |
nadA | y3052 | quinolinate synthetase | chromosome | CDS | 3360072 | 1062 | - | 0.507533 |
nadB | y1289 | L-aspartate oxidase | chromosome | CDS | 1432477 | 1638 | - | 0.484127 |
nadC | y0762 | nicotinate-nucleotide pyrophosphorylase | chromosome | CDS | 849223 | 948 | - | 0.483122 |
nadD | y1181 | nicotinic acid mononucleotide adenyltransferase | chromosome | CDS | 1324724 | 693 | - | 0.484848 |
pabA | y3953 | para-aminobenzoate synthase component II | chromosome | CDS | 4411873 | 576 | + | 0.519097 |
pabB | y2535 | para-aminobenzoate synthase component I | chromosome | CDS | 2796181 | 1377 | + | 0.511256 |
pabC | y1762 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1944034 | 807 | + | 0.488228 |
panB | y0786 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | chromosome | CDS | 878559 | 864 | - | 0.511574 |
panC | y0785 | pantoate--beta-alanine ligase | chromosome | CDS | 877617 | 855 | - | 0.530994 |
panD | y0784 | aspartate 1-decarboxylase precursor | chromosome | CDS | 876826 | 381 | - | 0.47769 |
panF | y0211 | sodium/panthothenate symporter | chromosome | CDS | 225850 | 1461 | + | 0.527721 |
pdxA | y3682 | 4-hydroxythreonine-4-phosphate dehydrogenase | chromosome | CDS | 4093820 | 1008 | + | 0.499008 |
pdxB | y1597 | erythronate-4-phosphate dehydrogenase | chromosome | CDS | 1765624 | 1188 | + | 0.537037 |
pdxH | y1965 | pyridoxamine 5'-phosphate oxidase | chromosome | CDS | 2165025 | 654 | + | 0.490826 |
pdxJ | y1300 | pyridoxal phosphate biosynthetic protein | chromosome | CDS | 1443983 | 732 | + | 0.495902 |
pdxY | y1967 | pyridoxine kinase | chromosome | CDS | 2167289 | 861 | + | 0.502904 |
pncB | y2757 | nicotinate phosphoribosyltransferase | chromosome | CDS | 3044056 | 1251 | + | 0.47482 |
pnuC | y3051 | nucleoside/purine/pyrimidine transporter | chromosome | CDS | 3359225 | 726 | - | 0.461433 |
poxB | y2821 | pyruvate dehydrogenase | chromosome | CDS | 3126012 | 1722 | + | 0.522648 |
ribA | y2064 | GTP cyclohydrolase II protein | chromosome | CDS | 2275663 | 603 | - | 0.466003 |
ribB | y3520 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | chromosome | CDS | 3903743 | 654 | - | 0.524465 |
ribD | y1000 | bifunctional pyrimidine deaminase/reductase | chromosome | CDS | 1129411 | 1110 | + | 0.527928 |
ribE | y1946 | riboflavin synthase subunit alpha | chromosome | CDS | 2147348 | 657 | + | 0.450533 |
ribF | y3701 | hypothetical protein | chromosome | CDS | 4113900 | 939 | - | 0.500533 |
ribH | y1001 | riboflavin synthase subunit beta | chromosome | CDS | 1130596 | 531 | + | 0.47646 |
serA | y3301 | D-3-phosphoglycerate dehydrogenase | chromosome | CDS | 3633170 | 1344 | - | 0.486607 |
serC | y2784 | phosphoserine aminotransferase | chromosome | CDS | 3078156 | 1086 | - | 0.474217 |
tbpA | y3651 | thiamin-binding periplasmic protein of ABC transporter | chromosome | CDS | 4051526 | 1083 | + | 0.491228 |
thiC | y0491 | thiamine biosynthesis protein ThiC | chromosome | CDS | 553068 | 2046 | - | 0.518084 |
thiD | y1373 | phosphomethylpyrimidine kinase | chromosome | CDS | 1523104 | 801 | + | 0.556804 |
thiE | y0490 | thiamine-phosphate pyrophosphorylase | chromosome | CDS | 552407 | 690 | - | 0.534783 |
thiF | y0489 | thiamine biosynthesis protein ThiF | chromosome | CDS | 551620 | 798 | - | 0.5401 |
thiG | y0488 | thiazole synthase | chromosome | CDS | 550591 | 1002 | - | 0.53493 |
thiH | y0487 | thiamine biosynthesis protein ThiH | chromosome | CDS | 549468 | 1146 | - | 0.501745 |
thiL | y1003 | thiamine monophosphate kinase | chromosome | CDS | 1131804 | 990 | + | 0.489899 |
thiQ | y3653 | ATP-binding component of a transport system | chromosome | CDS | 4054157 | 732 | + | 0.543716 |
trpE | y2051 | anthranilate synthase component I | chromosome | CDS | 2258835 | 1566 | - | 0.505109 |
ubiA | y0569 | 4-hydroxybenzoate octaprenyltransferase | chromosome | CDS | 643500 | 867 | + | 0.484429 |
ubiB | y0462 | NAD(P)H-flavin reductase | chromosome | CDS | 512625 | 744 | + | 0.486559 |
ubiC | y0568 | chorismate lyase | chromosome | CDS | 642768 | 567 | + | 0.516755 |
ubiE | y0449 | ubiquinone/menaquinone biosynthesis methyltransferase | chromosome | CDS | 501495 | 756 | + | 0.448413 |
ubiG | y2973 | 3-demethylubiquinone-9 3-methyltransferase | chromosome | CDS | 3277275 | 729 | + | 0.499314 |
ubiH | y3296 | 2-octaprenyl-6-methoxyphenyl hydroxylase | chromosome | CDS | 3628053 | 1179 | - | 0.550466 |
ubiX | y1606 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | chromosome | CDS | 1775799 | 588 | + | 0.467687 |
visC | y3295 | hypothetical protein | chromosome | CDS | 3626660 | 1437 | - | 0.537926 |
ybtS | y2394 | anthranilate synthase component I | chromosome | CDS | 2647129 | 1305 | - | 0.55249 |
yiuC | y2873 | ATP-binding protein of iron/siderophore ABC transporter | chromosome | CDS | 3171988 | 789 | - | 0.504436 |
ysuD | y2637 | ATP-binding component for iron transport system | chromosome | CDS | 2904022 | 849 | + | 0.485277 |