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2024-05-18 14:55:31

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Shigella flexneri 5 str. 8401, 8401

Number of genes found: 74

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
add SFV_1640 adenosine deaminasechromosome CDS1678504 1002 + 0.533932
adk SFV_0447 adenylate kinasechromosome CDS471350 645 + 0.517829
amn SFV_2053 AMP nucleosidasechromosome CDS2074685 1455 + 0.494845
apt SFV_0442 adenine phosphoribosyltransferasechromosome CDS465594 552 + 0.536232
carA SFV_0026 carbamoyl-phosphate synthetase, glutamine (small) subunitchromosome CDS28634 1149 + 0.533507
carB SFV_0027 carbamoyl-phosphate synthase large subunitchromosome CDS29800 3222 + 0.556797
cdd SFV_2218 cytidine/deoxycytidine deaminasechromosome CDS2248323 885 + 0.545763
cmk SFV_0911 cytidylate kinasechromosome CDS951929 684 + 0.539474
cpdB SFV_4274 2':3'-cyclic-nucleotide 2'-phosphodiesterasechromosome CDS4420000 1944 + 0.494856
cyaA SFV_3696 adenylate cyclasechromosome CDS3780816 2547 - 0.522576
dcd SFV_2124 2'-deoxycytidine 5'-triphosphate deaminasechromosome CDS2150075 582 - 0.601375
deoA SFV_4416 thymidine phosphorylasechromosome CDS4551960 1323 + 0.5548
deoC SFV_4415 2-deoxyribose-5-phosphate aldolasechromosome CDS4551054 780 + 0.55
deoD SFV_4418 purine-nucleoside phosphorylasechromosome CDS4554614 720 + 0.529167
dgt SFV_0145 deoxyguanosine triphosphate triphosphohydrolasechromosome CDS170567 1518 + 0.478261
dut SFV_3890 deoxyuridinetriphosphatasechromosome CDS3993686 456 - 0.546053
gmk SFV_3881 guanylate kinasechromosome CDS3986019 681 - 0.478708
gppA SFV_3725 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatasechromosome CDS3810087 1485 + 0.53468
gpt SFV_0292 guanine-hypoxanthine phosphoribosyltransferasechromosome CDS307201 459 - 0.520697
guaA SFV_2554 GMP synthetase (glutamine-hydrolyzing)chromosome CDS2616153 1578 - 0.540558
guaB SFV_2555 IMP dehydrogenasechromosome CDS2617799 1473 - 0.544467
guaC SFV_0096 GMP reductasechromosome CDS111616 1044 + 0.518199
hpt SFV_0116 hypoxanthine phosphoribosyltransferasechromosome CDS139134 600 + 0.493333
ndk SFV_2565 nucleoside diphosphate kinasechromosome CDS2629629 432 - 0.525463
nrdA SFV_2307 ribonucleoside diphosphate reductase 1, alpha subunit, B1chromosome CDS2355365 2286 + 0.536745
nrdB SFV_2308 ribonucleoside-diphosphate reductase 1, beta subunit, B2chromosome CDS2357653 1362 + 0.522026
nrdD SFV_4253 anaerobic ribonucleoside-triphosphate reductasechromosome CDS4393040 2139 + 0.536232
nrdE SFV_2828 ribonucleoside-diphosphate reductase 2, alpha subunitchromosome CDS2893169 2145 - 0.520746
nrdF SFV_2827 ribonucleoside-diphosphate reductase 2, beta chainchromosome CDS2892200 960 - 0.486458
nrdI SFV_2829 hypothetical proteinchromosome CDS2895286 411 - 0.559611
nupC SFV_2450 permease of transport system for 3 nucleosideschromosome CDS2509621 1203 + 0.496259
pfs SFV_0144 hypothetical proteinchromosome CDS169785 699 - 0.529328
ppx SFV_2547 exopolyphosphatasechromosome CDS2609111 1470 + 0.512245
prsA SFV_1221 phosphoribosylpyrophosphate synthetasechromosome CDS1270531 1014 - 0.530572
purA SFV_4335 adenylosuccinate synthetasechromosome CDS4477359 1299 + 0.538106
purB SFV_1166 adenylosuccinate lyasechromosome CDS1210657 1371 - 0.524435
purC SFV_2521 phosphoribosylaminoimidazole-succinocarboxamidesynthetasechromosome CDS2580777 714 - 0.522409
purD SFV_4077 phosphoribosylamine--glycine ligasechromosome CDS4194786 1290 - 0.57907
purE SFV_0481 phosphoribosylaminoimidazole carboxylasechromosome CDS508670 510 - 0.594118
purF SFV_2381 amidophosphoribosyltransferasechromosome CDS2430730 1518 - 0.528986
purH SFV_4078 bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolasechromosome CDS4196087 1590 - 0.560377
purK SFV_0480 phosphoribosylaminoimidazole carboxylasechromosome CDS507606 1068 - 0.562734
purL SFV_2605 phosphoribosylformyl-glycineamide synthetasechromosome CDS2672232 4044 - 0.563056
purM SFV_2544 phosphoribosylaminoimidazole synthetasechromosome CDS2605121 1038 + 0.534682
purN SFV_2545 phosphoribosylglycinamide formyltransferase 1chromosome CDS2606158 639 + 0.533646
purT SFV_1851 phosphoribosylglycinamide formyltransferase 2chromosome CDS1895374 1179 + 0.537744
purU SFV_1245 formyltetrahydrofolate deformylasechromosome CDS1297515 843 - 0.47331
pyrB SFV_4247 aspartate carbamoyltransferase, catalytic subunitchromosome CDS4383305 936 + 0.536325
pyrD SFV_0954 dihydro-orotate dehydrogenasechromosome CDS999989 1011 + 0.467854
pyrE SFV_3888 orotate phosphoribosyltransferasechromosome CDS3992305 642 + 0.528037
pyrF SFV_1294 orotidine-5'-phosphate decarboxylasechromosome CDS1350136 738 + 0.528455
pyrG SFV_2675 CTP synthetasechromosome CDS2750618 1638 + 0.514652
pyrH SFV_0154 uridylate kinasechromosome CDS182458 726 + 0.526171
pyrI SFV_4248 aspartate carbamoyltransferase, regulatory subunitchromosome CDS4384253 462 + 0.478355
tdk SFV_1251 thymidine kinasechromosome CDS1303260 618 + 0.423948
thiG SFV_4063 thiamin biosynthesis, thiazole moietychromosome CDS4181882 1029 - 0.588921
thyA SFV_2905 thymidylate synthetasechromosome CDS2971688 795 - 0.51195
tmk SFV_1118 thymidylate kinasechromosome CDS1160916 642 + 0.538941
udk SFV_2125 uridine/cytidine kinasechromosome CDS2150748 696 - 0.488506
udp SFV_3667 uridine phosphorylasechromosome CDS3753336 762 - 0.536745
upp SFV_2543 uracil phosphoribosyltransferasechromosome CDS2604171 627 - 0.5311
uraA SFV_2542 uracil transportchromosome CDS2602796 1227 - 0.517522
yaaF SFV_0024 hypothetical proteinchromosome CDS26276 915 + 0.557377
ybbT SFV_0472 hypothetical proteinchromosome CDS499744 483 + 0.513458
ybeK SFV_0675 putative tRNA synthetasechromosome CDS710594 936 + 0.511752
ycdG SFV_1018 putative transport proteinchromosome CDS1065155 1329 - 0.540256
ycfF SFV_1123 hypothetical proteinchromosome CDS1167682 360 + 0.502778
yeiJ SFV_2236 putative transport system permease proteinchromosome CDS2269013 1251 - 0.502798
yeiK SFV_2237 hypothetical proteinchromosome CDS2270363 942 - 0.515924
yeiM SFV_2239 putative transport system permease proteinchromosome CDS2272204 1251 - 0.510791
yfhC SFV_2607 putative deaminasechromosome CDS2677931 504 - 0.549603
ygfU SFV_2936 putative permeasechromosome CDS3003887 1449 + 0.487923
yggV SFV_3008 putative ribosomal proteinchromosome CDS3073544 594 + 0.557239
yicE SFV_3875 putative transport proteinchromosome CDS3977869 1392 - 0.550287