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2024-05-18 07:19:44

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 79

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSON_3036 hypothetical proteinchromosome CDS3196296 426 + 0.516432
NA SSON_3033 putative proteoglycanchromosome CDS3191314 1395 + 0.529032
add SSON_1535 adenosine deaminasechromosome CDS1610111 1002 - 0.535928
adk SSON_0461 adenylate kinasechromosome CDS489363 645 + 0.516279
amn SSON_2047 AMP nucleosidasechromosome CDS2146388 1455 - 0.497595
apt SSON_0456 adenine phosphoribosyltransferasechromosome CDS483606 552 + 0.541667
carA SSON_0037 carbamoyl-phosphate synthetase, glutamine (small) subunitchromosome CDS36817 1149 + 0.532637
carB SSON_0038 carbamoyl-phosphate synthase large subunitchromosome CDS37983 3222 + 0.562384
cdd SSON_2199 cytidine/deoxycytidine deaminasechromosome CDS2304778 885 + 0.548023
cmk SSON_0912 cytidylate kinasechromosome CDS976909 684 + 0.533626
cpdB SSON_4398 2':3'-cyclic-nucleotide 2'-phosphodiesterasechromosome CDS4661629 1944 - 0.494342
cyaA SSON_3978 adenylate cyclasechromosome CDS4200291 2547 + 0.521005
dcd SSON_2118 2'-deoxycytidine 5'-triphosphate deaminasechromosome CDS2214078 582 - 0.601375
deoA SSON_4533 thymidine phosphorylasechromosome CDS4802916 1323 + 0.547997
deoC SSON_4532 2-deoxyribose-5-phosphate aldolasechromosome CDS4802010 780 + 0.547436
deoD SSON_4535 purine-nucleoside phosphorylasechromosome CDS4805593 720 + 0.527778
dut SSON_3766 deoxyuridinetriphosphatasechromosome CDS3952718 456 - 0.548246
gmk SSON_3757 guanylate kinasechromosome CDS3945050 624 - 0.488782
gppA SSON_3950 guanosine pentaphosphatase; exopolyphosphatasechromosome CDS4173437 1485 - 0.538047
gpt SSON_0280 guanine-hypoxanthine phosphoribosyltransferasechromosome CDS308731 459 + 0.51634
guaA SSON_2589 GMP synthetasechromosome CDS2734501 1578 - 0.542459
guaC SSON_0112 GMP reductasechromosome CDS122671 1044 + 0.51341
hpt SSON_0133 hypoxanthine phosphoribosyltransferasechromosome CDS150395 549 + 0.504554
ndk SSON_2600 nucleoside diphosphate kinasechromosome CDS2747975 432 - 0.530093
nrdA SSON_2293 ribonucleoside diphosphate reductase 1, alpha subunit, B1chromosome CDS2418378 2286 + 0.538058
nrdB SSON_2294 ribonucleoside-diphosphate reductase 1, beta subunit, B2chromosome CDS2420897 1131 + 0.507515
nrdD SSON_4419 anaerobic ribonucleoside-triphosphate reductasechromosome CDS4686975 2139 - 0.538569
nrdE SSON_2820 ribonucleoside-diphosphate reductase 2 alpha subunitchromosome CDS2962464 2145 + 0.523543
nrdF SSON_2821 ribonucleoside-diphosphate reductase 2, beta chain, fragchromosome CDS2964618 960 + 0.48125
nupC SSON_2485 permease of transport system for 3 nucleosideschromosome CDS2626978 1203 + 0.496259
pfs SSON_0171 hypothetical proteinchromosome CDS192598 699 - 0.529328
ppx SSON_2584 exopolyphosphatasechromosome CDS2728656 1542 + 0.514916
prsA SSON_1971 phosphoribosylpyrophosphate synthetasechromosome CDS2072881 948 + 0.528481
purA SSON_4362 adenylosuccinate synthetasechromosome CDS4631536 1299 + 0.538106
purB SSON_1149 adenylosuccinate lyasechromosome CDS1230639 1371 - 0.527352
purC SSON_2557 phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetasechromosome CDS2698958 714 - 0.522409
purD SSON_4178 phosphoribosylglycinamide synthetasechromosome CDS4422833 1290 - 0.582171
purE SSON_0495 phosphoribosylaminoimidazole carboxylasechromosome CDS524185 510 + 0.580392
purF SSON_2370 amidophosphoribosyltransferasechromosome CDS2500489 1518 - 0.527009
purH SSON_4179 phosphoribosylaminoimidazolecarboxamideformyltransferasechromosome CDS4424134 1590 - 0.561635
purK SSON_0496 phosphoribosylaminoimidazole carboxylasechromosome CDS524691 1068 + 0.564607
purL SSON_2640 phosphoribosylformyl-glycineamide synthetase FGAM synthetasechromosome CDS2795630 3888 - 0.569959
purM SSON_2581 phosphoribosylaminoimidazole synthetasechromosome CDS2724739 1038 + 0.531792
purN SSON_2582 phosphoribosylglycinamide formyltransferase 1chromosome CDS2725776 639 + 0.532081
purT SSON_1299 phosphoribosylglycinamide formyltransferase 2chromosome CDS1376240 1179 - 0.537744
purU SSON_1947 formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesischromosome CDS2046905 843 + 0.47331
pyrB SSON_4426 aspartate carbamoyltransferase, catalytic subunitchromosome CDS4697913 936 - 0.537393
pyrC SSON_1082 dihydro-orotasechromosome CDS1162866 1047 - 0.531041
pyrD SSON_0949 dihydro-orotate dehydrogenasechromosome CDS1022861 1011 + 0.469832
pyrE SSON_3764 orotate phosphoribosyltransferasechromosome CDS3951337 642 + 0.52648
pyrF SSON_1859 orotidine-5'-phosphate decarboxylasechromosome CDS1956878 738 - 0.525745
pyrG SSON_2937 CTP synthetasechromosome CDS3077756 1638 - 0.517094
pyrH SSON_0183 uridylate kinasechromosome CDS206776 726 + 0.527548
pyrI SSON_4425 aspartate carbamoyltransferase, regulatory subunitchromosome CDS4697439 462 - 0.489177
tdk SSON_1941 thymidine kinasechromosome CDS2041385 618 - 0.423948
thyA SSON_2984 thymidylate synthetasechromosome CDS3133977 795 - 0.510692
tmk SSON_1118 thymidylate kinasechromosome CDS1196415 642 + 0.537383
udk SSON_2119 uridine/cytidine kinasechromosome CDS2214751 696 - 0.489943
udp SSON_4006 uridine phosphorylasechromosome CDS4233875 762 + 0.538058
upp SSON_2580 uracil phosphoribosyltransferasechromosome CDS2723788 654 - 0.533639
uraA SSON_2579 uracil transportchromosome CDS2722413 1290 - 0.520155
ushA SSON_0469 UDP-sugar hydrolasechromosome CDS498265 1653 + 0.507562
ushA SSO_P147 UshApSS_046 CDS131553 1653 + 0.405324
yaaF SSON_0035 hypothetical proteinchromosome CDS34459 915 + 0.554098
yahJ SSON_0309 putative deaminasechromosome CDS338064 1383 - 0.562545
ybeK SSON_0605 putative tRNA synthetasechromosome CDS644768 936 - 0.510684
ycdG SSON_1024 putative transport proteinchromosome CDS1104435 1395 - 0.539785
ycfF SSON_1123 hypothetical proteinchromosome CDS1203176 360 + 0.505556
yeiJ SSON_2217 putative transport system permease proteinchromosome CDS2325661 1251 - 0.4996
yeiK SSON_2218 hypothetical proteinchromosome CDS2327011 942 - 0.5138
yeiM SSON_2220 putative transport system permease proteinchromosome CDS2328847 1251 - 0.503597
yfhC SSON_2642 putative deaminasechromosome CDS2801328 537 - 0.543762
ygfU SSON_3041 putative permeasechromosome CDS3201105 1518 + 0.48419
yggV SSON_3108 putative ribosomal proteinchromosome CDS3268398 594 + 0.558923
yghR SSON_3220 hypothetical proteinchromosome CDS3386188 759 + 0.534914
yghS SSON_3219 hypothetical proteinchromosome CDS3385443 714 + 0.501401
yghT SSON_3130 hypothetical proteinchromosome CDS3290584 675 + 0.497778
yicE SSON_3751 putative transport proteinchromosome CDS3936765 1392 - 0.551724
yicP SSON_3619 probable adenine deaminasechromosome CDS3786982 1767 + 0.546689