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2024-05-18 06:10:11

Gene list

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COG category: Unclassified
Organism: Yersinia pseudotuberculosis IP 32953, IP 32953

Number of genes found: 69

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pYV0098 yopP, yopJ; putative targeted effector proteinpYV CDS67275 867 - 0.346021
NA pYptb0023 hypothetical proteinpYptb32953 CDS17081 132 + 0.477273
NA pYV0069 yscP; putative type III secretion proteinpYV CDS47223 1368 + 0.487573
NA pYV0042 yopT chaperonepYV CDS30481 393 + 0.414758
NA pYV0065 yopN, lcrE; putative membrane-bound Yop targeting proteinpYV CDS44364 882 - 0.460317
NA pYV0062 yscX; putative type III secretion proteinpYV CDS43382 369 - 0.495935
NA pYptb0034 hypothetical proteinpYptb32953 CDS23751 249 + 0.401606
NA pYV0049 hypothetical proteinpYV CDS35209 216 - 0.430556
NA pYptb0024 hypothetical proteinpYptb32953 CDS17219 126 + 0.547619
NA pYptb0010 hypothetical proteinpYptb32953 CDS7718 246 + 0.443089
NA pYptb0026 hypothetical proteinpYptb32953 CDS17463 60 + 0.483333
NA pYptb0040 hypothetical proteinpYptb32953 CDS26953 147 + 0.469388
NA pYV0053 hypothetical proteinpYV CDS36160 168 + 0.428571
NA pYV0099 hypothetical proteinpYV CDS68142 135 - 0.392593
NA pYptb0019 hypothetical proteinpYptb32953 CDS15826 267 + 0.318352
NA pYV0081 yscE; putative type III secretion proteinpYV CDS58082 201 + 0.422886
NA pYptb0036 hypothetical proteinpYptb32953 CDS25339 237 + 0.42616
NA pYptb0042 hypothetical proteinpYptb32953 CDS27236 147 + 0.272109
NA pYV0043 possible transposase remnantpYV CDS31368 192 + 0.458333
NA pYV0063 sycN; putative type III secretion proteinpYV CDS43747 372 - 0.524194
NA pYV0005 repA, repA1; putative replication initiation proteinpYV CDS4823 879 - 0.5438
NA pYV0020 sycH; putative yopH targeting proteinpYV CDS16714 426 - 0.41784
NA pYV0066 hypothetical proteinpYV CDS45305 105 + 0.390476
NA pYV0084 yscH, yopR, lcrP; putative type III secretion proteinpYV CDS58892 498 + 0.427711
NA pYptb0027 hypothetical proteinpYptb32953 CDS17550 123 + 0.520325
NA pYptb0032 hypothetical proteinpYptb32953 CDS23291 153 + 0.496732
NA pYV0048 hypothetical proteinpYV CDS35009 96 - 0.40625
NA pYptb0021 hypothetical proteinpYptb32953 CDS16529 273 + 0.377289
NA pYptb0003 hypothetical proteinpYptb32953 CDS1910 228 + 0.29386
NA pYV0083 yscG; putative type III secretion proteinpYV CDS58548 348 + 0.442529
NA pYV0024 sycE, yerA; putative yopE chaperonepYV CDS19897 393 - 0.409669
NA pYptb0016 hypothetical proteinpYptb32953 CDS13272 423 + 0.503546
NA pYV0087 yscK; putative type III secretion proteinpYV CDS60457 651 + 0.482335
NA pYV0033 hypothetical proteinpYV CDS25800 114 + 0.561404
NA pYV0044 hypothetical proteinpYV CDS31576 420 + 0.388095
NA pYptb0017 hypothetical proteinpYptb32953 CDS14071 306 + 0.506536
NA pYptb0041 hypothetical proteinpYptb32953 CDS27120 102 + 0.362745
NA pYV0002 hypothetical proteinpYV CDS2218 450 - 0.453333
NA pYptb0039 hypothetical proteinpYptb32953 CDS26513 294 + 0.479592
NA pYptb0033 hypothetical proteinpYptb32953 CDS23475 162 + 0.382716
NA pYV0082 yscF; putative type III secretion proteinpYV CDS58283 264 + 0.416667
NA pYptb0022 hypothetical proteinpYptb32953 CDS16823 174 + 0.545977
NA pYV0004 hypothetical proteinpYV CDS3411 240 - 0.504167
NA pYV0097 hypothetical proteinpYV CDS66902 93 - 0.387097
NA pYV0077 hypothetical proteinpYV CDS54263 99 + 0.323232
NA pYV0064 tyeA; putative Yop secretion and targeting proteinpYV CDS44105 279 - 0.433692
NA pYV0041 yop targeted effector yopTpYV CDS29513 969 + 0.430341
NA pYV0040 yop targeting protein yopK, yopQpYV CDS28491 549 - 0.333333
NA pYV0006 hypothetical proteinpYV CDS5803 153 + 0.490196
NA pYV0029 hypothetical proteinpYV CDS22359 174 + 0.471264
NA pYptb0043 hypothetical proteinpYptb32953 CDS27458 123 + 0.276423
NA pYptb0002 hypothetical proteinpYptb32953 CDS1316 309 + 0.339806
NA pYV0045 hypothetical proteinpYV CDS32524 192 - 0.458333
NA pYptb0025 hypothetical proteinpYptb32953 CDS17341 123 + 0.479675
NA pYV0096 transposase, IS630 familypYV CDS66691 129 - 0.434109
NA pYV0068 yscO; putative type III secretion proteinpYV CDS46759 465 + 0.455914
NA pYV0094 yopH; putative protein-tyrosine phosphatase Yop effectorpYV CDS64366 1407 - 0.474058
NA pYV0025 putative outer membrane virulence proteinpYV CDS20483 660 + 0.510606
NA pYV0075 virG; putative Yop targeting lipoproteinpYV CDS52850 396 + 0.444444
NA pYV0050 hypothetical proteinpYV CDS35445 123 + 0.463415
NA pYV0059 lcrR; hypothetical protein lcrRpYV CDS40503 441 - 0.489796
NA pYV0052 hypothetical proteinpYV CDS35951 123 + 0.479675
NA pYV0030 hypothetical proteinpYV CDS22682 294 - 0.5
NA pYptb0038 hypothetical proteinpYptb32953 CDS26274 216 + 0.398148
NA pYV0012 hypothetical proteinpYV CDS8771 210 - 0.447619
triB pYptb0005 TriB ProteinpYptb32953 CDS3194 294 + 0.452381
triD pYptb0007 TriD proteinpYptb32953 CDS6318 714 + 0.47619
triK pYptb0029 TriK proteinpYptb32953 CDS18485 1782 + 0.407969
triL pYptb0030 TriL proteinpYptb32953 CDS20274 741 + 0.388664