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2024-05-18 13:18:35

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Escherichia coli APEC O1, APEC O1

Number of genes found: 40

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli APEC O1, APEC O1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA APECO1_3161 hypothetical proteinchromosome CDS3723152 1125 - 0.505778
NA APECO1_2112 FimF protein precursorchromosome CDS4928715 534 + 0.490637
NA APECO1_3031 fimbrial chaperone protein precursorchromosome CDS3857029 780 - 0.380769
NA APECO1_1343 biopolymer transport proteinchromosome CDS741192 429 + 0.512821
aufA APECO1_3030 Auf fimbriae major subunit precursor AufAchromosome CDS3857882 705 - 0.476596
clpP APECO1_1574 ATP-dependent proteolytic subunit of ClpA-ClpP serine proteasechromosome CDS472393 624 + 0.501603
ecpD APECO1_1845 predicted periplasmic pilin chaperonechromosome CDS161474 741 - 0.442645
exbB APECO1_3418 membrane spanning protein in TonB-ExbB-ExbD complexchromosome CDS3434750 735 - 0.526531
exbD APECO1_3419 membrane spanning protein in TonB-ExbB-ExbD complexchromosome CDS3434318 426 - 0.483568
ffh APECO1_3923 signal recognition particle (SRP) component with 4.5S RNA (ffs)chromosome CDS2905548 1362 - 0.542584
fimC APECO1_2114 type I fimbrial chaperonechromosome CDS4925281 726 + 0.444904
flgM APECO1_153 FlgMchromosome CDS1112191 294 - 0.517007
flhB APECO1_929 flagellar biosynthesis protein Bchromosome CDS1972170 1149 - 0.550914
fliE APECO1_976 Flagellar hook-basal body complex protein fliEchromosome CDS2020023 315 - 0.549206
fliQ APECO1_988 flagellar biosynthetic protein FliQchromosome CDS2029940 270 + 0.507407
fliS APECO1_966 flagellar protein FliSchromosome CDS2010536 411 + 0.481752
hofC APECO1_3128 putative general secretion pathway protein Cchromosome CDS3746321 816 + 0.417892
hofD APECO1_3127 putative general secretion pathway protein D precursorchromosome CDS3747108 1965 + 0.498219
hofF APECO1_3125 putative general secretion pathway protein Fchromosome CDS3750560 1197 + 0.506266
hofG APECO1_3124 putative general secretion pathway protein G precursorchromosome CDS3751766 438 + 0.493151
lepB APECO1_3963 leader peptidase (signal peptidase I)chromosome CDS2858410 975 - 0.52
lspA APECO1_1956 signal peptidase IIchromosome CDS26715 495 + 0.523232
marC APECO1_647 Multiple antibiotic resistance protein MarCchromosome CDS1656184 666 - 0.504505
ppdA APECO1_3679 prepilin peptidase dependent protein A precursorchromosome CDS3171238 471 - 0.541401
prlA APECO1_3148 putative ATPase subunit of translocasechromosome CDS3733491 1332 - 0.496246
secD APECO1_1602 export membrane protein SecDchromosome CDS443619 1848 + 0.531926
secE APECO1_2491 preprotein translocase SecE subunitchromosome CDS4498939 384 + 0.549479
secF APECO1_1601 export membrane protein SecFchromosome CDS445432 1017 + 0.519174
secG APECO1_3257 putative export membrane proteinchromosome CDS3614903 333 - 0.501502
tatA APECO1_2619 sec-independent twin-arginine translocase subunit TatAchromosome CDS4340345 312 + 0.451923
tolB APECO1_1341 TolB protein precursorchromosome CDS743065 1296 + 0.532407
tolQ APECO1_1344 TolQ proteinchromosome CDS740496 693 + 0.503608
yadK APECO1_1849 hypothetical proteinchromosome CDS157025 597 - 0.433836
yadN APECO1_1844 putative fimbrial-like adhesin proteinchromosome CDS162323 615 - 0.426016
yajC APECO1_1603 hypothetical proteinchromosome CDS443259 333 + 0.495495
ychE APECO1_356 putative inner membrane proteinchromosome CDS1312075 648 + 0.476852
yehC APECO1_4436 putative fimbrial chaperone YehC precursorchromosome CDS2304460 675 - 0.38963
yhgN APECO1_3023 putative antibiotic transporterchromosome CDS3870016 594 + 0.503367
yidC APECO1_2754 inner membrane protein translocase component YidCchromosome CDS4179441 1647 + 0.535519
yjjA APECO1_2064 hypothetical proteinchromosome CDS4993692 498 - 0.491968