TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-18 10:52:49

Gene list

Applied filters:

COG category: Signal transduction mechanisms
Organism: Escherichia coli APEC O1, APEC O1

Number of genes found: 162

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli APEC O1, APEC O1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA APECO1_2971 putative phosphotransferase system enzyme subunitchromosome CDS3919243 474 + 0.489451
NA APECO1_549 putative filament proteinchromosome CDS1521673 507 - 0.475345
NA APECO1_2300 putative histidine kinasechromosome CDS4725378 1263 - 0.429929
NA APECO1_3483 hypothetical proteinchromosome CDS3359182 1536 + 0.455078
NA APECO1_1623 hypothetical proteinchromosome CDS419528 1116 + 0.537634
NA APECO1_281 hypothetical proteinchromosome CDS1231100 720 + 0.438889
NA APECO1_2799 putative phosphotransferase system (PTS), fructose-specificchromosome CDS4128296 471 - 0.43949
NA APECO1_4378 hypothetical proteinchromosome CDS2383464 1557 + 0.499037
NA APECO1_4021 hypothetical proteinchromosome CDS2776855 780 + 0.517949
NA APECO1_230 putative CI repressor of bacteriophagechromosome CDS1187670 696 - 0.462644
NA APECO1_4183 putative phage repressor proteinchromosome CDS2603887 651 + 0.470046
NA APECO1_1169 DNA-binding response regulator in two-component regulatory system with BaeSchromosome CDS2251162 723 + 0.540802
NA APECO1_2403 two component response regulatorchromosome CDS4607041 1359 - 0.443709
NA APECO1_4475 LysB proteinchromosome CDS936387 426 + 0.586854
NA APECO1_2301 hypothetical proteinchromosome CDS4724306 1056 - 0.425189
NA APECO1_1682 hypothetical proteinchromosome CDS350360 795 - 0.489308
NA APECO1_618 hypothetical proteinchromosome CDS1613075 2424 - 0.500413
NA APECO1_3872 putative phage repressorchromosome CDS2950030 675 + 0.447407
NA APECO1_4385 fructose-specific PTS system IIA componentchromosome CDS2375104 1131 - 0.559682
NA APECO1_486 hypothetical proteinchromosome CDS1454309 951 - 0.506835
NA APECO1_2039 hypothetical proteinchromosome CDS5014642 360 + 0.547222
aceK APECO1_2460 AceK, bifunctional isocitrate dehydrogenase kinase/phosphatase proteinchromosome CDS4538990 1725 + 0.527536
aec23 APECO1_1763 hypothetical proteinchromosome CDS256415 1293 - 0.593194
ampE APECO1_1878 putative beta lactamase regulatorchromosome CDS121586 855 + 0.51462
apaH APECO1_1933 bis(5'-nucleosyl)-tetraphosphatase, symmetricalchromosome CDS53553 849 - 0.553592
arcA APECO1_1978 global response regulatorchromosome CDS5079944 717 - 0.509066
arcB APECO1_3225 aerobic respiration control sensor protein ArcBchromosome CDS3643279 2337 - 0.506632
artI APECO1_1230 arginine transporter subunitchromosome CDS864818 732 - 0.487705
artJ APECO1_1233 arginine-binding periplasmic protein 2 precursorchromosome CDS862470 783 - 0.457216
atoC APECO1_4339 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction proteinchromosome CDS2430859 1386 + 0.491342
baeS APECO1_1168 Sensor proteinchromosome CDS2249762 1404 + 0.531339
barA APECO1_3745 BarA, sensory histidine kinase; two-component regulator with UvrYchromosome CDS3084021 2757 + 0.496554
basR APECO1_2338 BasR, DNA-binding response regulator in two-component regulatory system with BasSchromosome CDS4679325 669 - 0.538117
basS APECO1_2339 BasS, sensory histidine kinase in two-component regulatory system with BasRchromosome CDS4678224 1092 - 0.538462
bglJ APECO1_2058 BglJ 2-component transcriptional regulatorchromosome CDS4998159 678 + 0.448378
bipA APECO1_2591 GTP-binding proteinchromosome CDS4376376 1824 + 0.532895
bolA APECO1_1576 regulator of penicillin binding proteins and beta lactamase transcriptionchromosome CDS470155 351 + 0.481481
cadC APECO1_2320 transcriptional activator CadCchromosome CDS4704808 1539 - 0.422352
cdaR APECO1_1823 carbohydrate diacid regulatorchromosome CDS188283 1131 + 0.531388
cheB APECO1_932 protein-glutamate methylesterasechromosome CDS1974586 1050 - 0.535238
cheR APECO1_933 chemotaxis regulator, protein-glutamate methyltransferasechromosome CDS1975638 861 - 0.54007
cheW APECO1_935 positive regulator of CheA protein activitychromosome CDS1978595 504 - 0.521825
cheY APECO1_931 chemotaxis protein CheYchromosome CDS1974182 390 - 0.489744
cheZ APECO1_930 chemotaxis regulator, protein phosphatase for CheYchromosome CDS1973527 645 - 0.537984
chpA APECO1_3748 probable growth inhibitor, PemK-like, autoregulatedchromosome CDS3079720 336 - 0.479167
citB APECO1_1432 hypothetical proteinchromosome CDS637911 681 + 0.508076
cmtB APECO1_3596 PTS system, mannitol-specific enzyme II component, crypticchromosome CDS3271557 444 - 0.423423
cpxA APECO1_2557 sensory histidine kinase in two-component regulatory system with CpxRchromosome CDS4412578 1374 - 0.546579
cpxR APECO1_2556 transcriptional regulatory protein CpxRchromosome CDS4413948 699 - 0.51073
creB APECO1_1981 catabolic regulation response regulator CreBchromosome CDS5076361 690 + 0.544928
creC APECO1_1980 sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulonchromosome CDS5077050 1425 + 0.538246
crp APECO1_3098 DNA-binding transcriptional dual regulatorchromosome CDS3776902 633 + 0.49763
cstA APECO1_1451 carbon starvation proteinchromosome CDS615413 2106 + 0.5717
cusS APECO1_1478 Sensor kinase cusSchromosome CDS580505 1443 - 0.518364
dksA APECO1_1840 DnaK suppressor proteinchromosome CDS166171 474 - 0.523207
dpiB APECO1_1433 sensor kinase DpiBchromosome CDS636284 1659 + 0.496082
envZ APECO1_3060 osmolarity sensor protein EnvZchromosome CDS3819961 1353 - 0.56541
evgA APECO1_4167 DNA-binding response regulator in two-component regulatory system with EvgSchromosome CDS2617560 615 + 0.398374
evgS APECO1_4166 sensor protein EvgS precursorchromosome CDS2618179 3594 + 0.409293
fhlA APECO1_3794 formate hydrogenlyase transcriptional activatorchromosome CDS3028588 2079 + 0.518037
fliY APECO1_961 cystine-binding periplasmic protein precursorchromosome CDS2004558 858 - 0.491841
fnr APECO1_487 fumarate and nitrate reduction regulatory proteinchromosome CDS1455411 795 - 0.496855
gatA APECO1_4451 galactitol-specific enzyme IIA of phosphotransferase systemchromosome CDS2288210 453 - 0.426049
glnE APECO1_3361 glutamate-ammonia-ligase adenylyltransferasechromosome CDS3497509 2913 - 0.555441
glnG APECO1_2594 fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction proteinchromosome CDS4371950 1410 - 0.56383
glnH APECO1_1280 glutamine ABC transporter periplasmic-binding proteinchromosome CDS811532 747 - 0.483266
glnL APECO1_2593 GlnL, sensory histidine kinase in two-component regulatory system with GlnGchromosome CDS4373371 1050 - 0.552381
htrG APECO1_3359 putative signal transduction protein (SH3 domain)chromosome CDS3501915 621 + 0.523349
kdpD APECO1_1372 sensor protein KdpDchromosome CDS705328 2685 - 0.576536
kdpE APECO1_1373 KDP operon transcriptional regulatory protein kdpEchromosome CDS704654 678 - 0.566372
lexA APECO1_2426 LexA repressorchromosome CDS4578336 609 + 0.518883
luxS APECO1_3834 S-ribosylhomocysteinasechromosome CDS2988043 516 - 0.51938
narL APECO1_338 nitrate/nitrite response regulator protein NarLchromosome CDS1287835 651 - 0.516129
narP APECO1_4365 nitrate/nitrite response regulator protein NarPchromosome CDS2400216 678 + 0.514749
narQ APECO1_4088 sensory histidine kinase in two-component regulatory system with NarP (NarL)chromosome CDS2707879 1716 + 0.52331
narX APECO1_339 nitrate/nitrite sensor protein NarXchromosome CDS1288478 1797 - 0.532554
nrfB APECO1_2384 NrfB, formate-dependent nitrite reductase; a penta-haeme cytochrome cchromosome CDS4630935 573 + 0.542757
ompR APECO1_3059 osmolarity response regulator OmpRchromosome CDS3821310 720 - 0.548611
pgtA APECO1_3507 phosphoglycerate activator proteinchromosome CDS3334104 1257 + 0.488465
pgtB APECO1_3508 putative regulatory proteinchromosome CDS3332114 2010 + 0.486567
phoB APECO1_1611 positive response regulator for pho regulonchromosome CDS432989 690 + 0.53913
phoH APECO1_111 conserved protein with nucleoside triphosphate hydrolase domainchromosome CDS1070704 924 + 0.525974
phoP APECO1_212 transcriptional regulatory protein PhoPchromosome CDS1172144 672 - 0.471726
phoQ APECO1_211 Sensor protein PhoQchromosome CDS1170684 1461 - 0.508556
phoR APECO1_1610 phosphate regulon sensor protein PhoRchromosome CDS433736 1296 + 0.531636
pphA APECO1_891 serine/threonine protein phosphatase 1chromosome CDS1930228 657 - 0.480974
pphB APECO1_3790 serine/threonine-specific protein phosphatase 2chromosome CDS3034475 657 + 0.42618
proQ APECO1_886 Activator of osmoprotectant transporter ProPchromosome CDS1922751 699 - 0.532189
pspA APECO1_459 phage shock protein Achromosome CDS1425312 669 + 0.491779
pspC APECO1_460 phage shock protein Cchromosome CDS1426258 360 + 0.505556
pspF APECO1_458 psp operon transcriptional activatorchromosome CDS1424169 993 - 0.51863
ptsN APECO1_3231 nitrogen regulatory IIA proteinchromosome CDS3639144 516 + 0.515504
ptsP APECO1_3676 phosphoenolpyruvate-protein phosphotransferase PtsPchromosome CDS3173720 2247 - 0.536271
qseC APECO1_3395 sensor protein QseCchromosome CDS3460747 1350 + 0.528148
rcsA APECO1_990 positive regulator for ctr capsule biosynthesis, positive transcription factorchromosome CDS2031293 624 + 0.38141
rcsB APECO1_4342 DNA-binding response regulator in two-component regulatory system with RcsC and YojNchromosome CDS2425170 651 + 0.471582
relA APECO1_3747 (p)ppGpp synthetase I/GTP pyrophosphokinasechromosome CDS3080381 2235 - 0.540492
rseA APECO1_3959 sigma-E factor, negative regulatory proteinchromosome CDS2862829 651 - 0.517665
rseB APECO1_3960 sigma-E factor regulatory protein RseB precursorchromosome CDS2861873 957 - 0.513062
rseC APECO1_3961 sigma-E factor regulatory protein RseCchromosome CDS2861397 480 - 0.552083
rssB APECO1_349 RssB/Hnr proteinchromosome CDS1303564 1014 + 0.485207
rstA APECO1_691 transcriptional regulatory protein RstAchromosome CDS1703781 756 + 0.490741
rstB APECO1_692 sensor protein RstBchromosome CDS1704540 1302 + 0.512289
rtcR APECO1_3045 transcriptional regulatory protein RtcRchromosome CDS3843859 1560 + 0.549359
sixA APECO1_4226 phosphohistidine phosphatase SixAchromosome CDS2561553 486 - 0.520576
smp APECO1_1994 Smp protein precursorchromosome CDS5064104 645 - 0.564341
spoT APECO1_2811 guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolasechromosome CDS4113875 1962 + 0.540265
torR APECO1_88 TorCAD operon transcriptional regulatory protein torRchromosome CDS1044502 693 - 0.535354
torS APECO1_86 sensor protein TorSchromosome CDS1040686 2733 - 0.540432
uhpB APECO1_2784 UhpB, sensory histidine kinase in two-component regulatory sytem with UhpAchromosome CDS4147450 1503 - 0.564205
umuD APECO1_295 mutagenesis and repair protein UmuDchromosome CDS1241927 420 + 0.480952
uspA APECO1_2958 universal stress global response regulator UspAchromosome CDS3934699 435 + 0.494253
uspG APECO1_1442 universal stress protein UspGchromosome CDS626822 462 - 0.47619
yahA APECO1_1675 putative DNA-binding transcriptional regulatorchromosome CDS359926 1095 + 0.454795
ybeJ APECO1_1408 Glutamate/aspartate Periplasmic binding protein precursorchromosome CDS662358 978 - 0.486708
ybeZ APECO1_1403 putative ATP-binding protein in pho regulonchromosome CDS668722 1080 - 0.541667
ycdT APECO1_116 predicted diguanylate cyclasechromosome CDS1078448 1368 + 0.380117
ycgF APECO1_278 hypothetical proteinchromosome CDS1227896 1212 - 0.430693
yciR APECO1_444 hypothetical proteinchromosome CDS1403602 1986 - 0.483887
ydaM APECO1_493 hypothetical proteinchromosome CDS1461634 1293 - 0.469451
ydeH APECO1_658 hypothetical proteinchromosome CDS1667148 897 - 0.444816
yeaG APECO1_851 hypothetical proteinchromosome CDS1880384 1935 + 0.499225
yeaI APECO1_853 hypothetical proteinchromosome CDS1883861 1476 + 0.386856
yeaJ APECO1_854 hypothetical proteinchromosome CDS1885337 1671 + 0.454817
yeaP APECO1_859 hypothetical proteinchromosome CDS1891191 1026 + 0.479532
yecG APECO1_941 universal stress proteinchromosome CDS1984736 429 + 0.449883
yedQ APECO1_994 hypothetical proteinchromosome CDS2033648 1695 - 0.519174
yedV APECO1_1003 putative 2-component sensor proteinchromosome CDS2044043 1359 - 0.396615
yedW APECO1_1004 putative 2-component transcriptional regulatorchromosome CDS2045401 783 - 0.436782
yegE APECO1_1158 putative sensor-type proteinchromosome CDS2230892 3318 + 0.523207
yehT APECO1_4424 putative response regulator in two-component system with YehUchromosome CDS2326240 735 - 0.502041
yehU APECO1_4423 putative sensory kinase in two-component system with YehTchromosome CDS2326956 1686 - 0.50949
yeiL APECO1_4391 ribonucleoside hydrolase 2chromosome CDS2368065 660 + 0.439394
yfdA APECO1_4144 conserved outer membrane proteinchromosome CDS2648103 2250 - 0.477778
yfgF APECO1_4066 hypothetical proteinchromosome CDS2735113 2187 - 0.467764
yfhA APECO1_3977 putative DNA-binding response regulator in two-component systemchromosome CDS2841528 1374 - 0.549491
yfhK APECO1_3975 putative sensor-like histidine kinase YfhKchromosome CDS2843730 1383 - 0.53073
yfiN APECO1_3929 putative diguanylate cyclasechromosome CDS2901606 1227 + 0.480033
ygaA APECO1_3817 putative sigma-54-dependent transcriptional regulator YgaAchromosome CDS3004335 1515 - 0.566337
ygeV APECO1_3657 DNA-binding transcriptional regulatorchromosome CDS3199949 1779 - 0.459809
ygiX APECO1_3396 transcriptional regulatory protein QseBchromosome CDS3460091 660 + 0.525758
yhdA APECO1_3193 hypothetical proteinchromosome CDS3683689 1941 - 0.503864
yhjB APECO1_2928 putative DNA-binding response regulator in two-component regulatory systemchromosome CDS3970865 603 - 0.474295
yhjJ APECO1_2923 hypothetical proteinchromosome CDS3977834 768 - 0.52474
yhjK APECO1_2919 putative diguanylate cyclasechromosome CDS3983043 1956 - 0.522495
yiiT APECO1_2546 stress-induced proteinchromosome CDS4422269 429 + 0.435897
yjcC APECO1_2395 YjcC, predicted signal transduction protein (EAL domain containing protein)chromosome CDS4616545 1587 + 0.447385
yjdG APECO1_2328 transcriptional regulatory protein DcuRchromosome CDS4693725 720 - 0.494444
yjfJ APECO1_2210 predicted transcriptional regulator effector proteinchromosome CDS4818001 699 + 0.509299
yjiY APECO1_2073 putative carbon starvation proteinchromosome CDS4979426 2166 - 0.560942
yjjQ APECO1_2059 hypothetical proteinchromosome CDS4997476 726 + 0.450413
ylaB APECO1_1555 hypothetical proteinchromosome CDS492795 1557 - 0.479769
ylcA APECO1_1477 putative 2-component transcriptional regulatorchromosome CDS581937 684 - 0.545322
yliE APECO1_1260 conserved hypothetical protein YliEchromosome CDS835795 2349 + 0.411239
yliF APECO1_1259 predicted diguanylate cyclasechromosome CDS838151 1329 + 0.428894
yneF APECO1_642 hypothetical proteinchromosome CDS1649354 1419 - 0.487667
yoaD APECO1_872 hypothetical proteinchromosome CDS1906332 1608 + 0.501866
yojN APECO1_4343 putative sensor-like histidine kinase YojNchromosome CDS2422481 2673 + 0.49682
ypdA APECO1_4157 YpdA, sensory kinase in two-component system with YpdBchromosome CDS2632494 1680 + 0.510714
ypdB APECO1_4156 YpdB, predicted response regulator in two-component system with YpdAchromosome CDS2634263 663 + 0.479638
zraR APECO1_2471 ZraR, fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction proteinchromosome CDS4523831 1326 + 0.566365
zraS APECO1_2472 ZraS, sensory histidine kinase in two-component regulatory system with ZraRchromosome CDS4522458 1377 + 0.544662