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2024-05-18 14:26:37

Gene list

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COG category: Signal transduction mechanisms
Organism: Yersinia pestis KIM, KIM

Number of genes found: 139

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA y0066 solute-binding periplasmic protein of ABC transpoterchromosome CDS76410 489 - 0.466258
NA y2168 hypothetical proteinchromosome CDS2395498 1935 + 0.451163
NA y1672 chemotaxis methyl-accepting transducerchromosome CDS1845958 1305 + 0.481226
NA y3389 hypothetical proteinchromosome CDS3737160 2367 - 0.48289
NA y1483 kinase sensor proteinchromosome CDS1646462 1350 + 0.491852
NA y1194 ATP-binding protein in pho regulonchromosome CDS1337520 1113 - 0.501348
NA y1582 hypothetical proteinchromosome CDS1749554 492 + 0.512195
NA y3803 GTP-binding factorchromosome CDS4221887 1824 - 0.490132
NA y2958 methyl-accepting chemotaxis transmembrane proteinchromosome CDS3256754 1815 + 0.501377
NA y2558 hypothetical proteinchromosome CDS2820175 519 + 0.475915
NA y2954 phage repressor protein cIchromosome CDS3254082 723 + 0.477178
NA y1736 hypothetical proteinchromosome CDS1918977 114 - 0.482456
NA y1473 sensor kinasechromosome CDS1632225 1545 - 0.497735
NA y1741 hypothetical proteinchromosome CDS1922705 642 - 0.376947
NA y1612 hypothetical proteinchromosome CDS1781386 699 + 0.399142
NA y2574 hypothetical proteinchromosome CDS2834927 852 + 0.488263
NA y1618 phosphotransferase system IIA componentchromosome CDS1786795 444 - 0.477477
NA y3864 hypothetical proteinchromosome CDS4303960 2556 - 0.545775
NA y2307 two-component transcriptional regulatorchromosome CDS2542389 693 + 0.520923
NA y0888 S-ribosylhomocysteinasechromosome CDS999354 516 + 0.474806
NA y0902 hypothetical proteinchromosome CDS1010428 774 - 0.44832
NA y1315 two-component transcriptional regulatorchromosome CDS1461855 1368 + 0.498538
NA y1313 two-component sensor proteinchromosome CDS1459400 1452 + 0.484848
NA y0203 hypothetical proteinchromosome CDS216331 1917 - 0.481481
NA y3528 hypothetical proteinchromosome CDS3913060 624 + 0.459936
NA y3190 methyl-accepting chemotaxis proteinchromosome CDS3511963 1701 - 0.449735
NA y3730 hypothetical proteinchromosome CDS4146895 1278 + 0.489828
NA y0932 solute-binding protein of ABC transporterchromosome CDS1047566 789 + 0.501901
NA y2559 hypothetical proteinchromosome CDS2820902 1356 + 0.485988
NA y0279 hypothetical proteinchromosome CDS299092 1317 - 0.511769
NA y0513 response regulatorchromosome CDS582517 2790 - 0.469892
NA y2968 two-component sensor proteinchromosome CDS3267861 1953 + 0.430108
NA y3841 hypothetical proteinchromosome CDS4274445 846 + 0.48818
NA y1865 hypothetical proteinchromosome CDS2058255 519 + 0.450867
NA y2408 hypothetical proteinchromosome CDS2678843 210 + 0.519048
NA y3885 two-component sensor proteinchromosome CDS4334309 1698 - 0.48351
NA y2387 Histidine protein kinase sensorchromosome CDS2634761 3852 + 0.471184
NA y2103 hypothetical proteinchromosome CDS2317722 600 + 0.373333
NA y0429 hypothetical proteinchromosome CDS477393 519 - 0.49711
NA y2471 hypothetical proteinchromosome CDS2734175 1914 + 0.429467
NA y1164 regulatory proteinchromosome CDS1311511 618 + 0.357605
NA y0512 response regulator/transcription activatorchromosome CDS581872 633 - 0.450237
NA y4125 solute-binding periplasmic protein precursor for ABC transporterchromosome CDS4578668 855 - 0.454971
NA y0847 hypothetical proteinchromosome CDS947402 771 - 0.433204
NA y4032 hypothetical proteinchromosome CDS4468779 801 - 0.496879
NA y1472 response regulatorchromosome CDS1631521 708 - 0.514124
NA y2969 hypothetical proteinchromosome CDS3269981 573 + 0.390925
NA y2472 hypothetical proteinchromosome CDS2736225 906 + 0.431567
NA y2308 hisitidine protein kinase sensorchromosome CDS2543087 1392 + 0.51796
NA y2133 hypothetical proteinchromosome CDS2355779 957 + 0.45768
NA y3832 hypothetical proteinchromosome CDS4262933 2187 + 0.478281
NA y3851 hypothetical proteinchromosome CDS4288430 1128 - 0.472518
NA y3583 tellurite resistance proteinchromosome CDS3974339 642 + 0.442368
NA y0445 hypothetical proteinchromosome CDS495883 831 + 0.468111
NA y1271 hypothetical proteinchromosome CDS1418989 1038 + 0.470135
NA y3587 hypothetical proteinchromosome CDS3978526 1500 + 0.49
aceK y0018 bifunctional isocitrate dehydrogenase kinase/phosphatase proteinchromosome CDS22514 1728 + 0.46412
aer y1805 aerotaxis sensor receptor, flavoproteinchromosome CDS1984630 1638 - 0.499389
apaH y3685 diadenosinetetraphosphatasechromosome CDS4096046 870 + 0.481609
arcA y3721 negative response regulator of genes in aerobic pathways, sensors, ArcB and CpxAchromosome CDS4136312 717 + 0.481172
arcB y0126 aerobic respiration sensor-response protein; histidine protein kinase/phosphatasechromosome CDS132561 2337 - 0.483526
artI y2830 arginine 3rd transport system periplasmic binding proteinchromosome CDS3134117 756 + 0.455026
artJ y2844 arginine 3rd transport system periplasmic binding proteinchromosome CDS3144507 759 + 0.445323
atoC y3466 response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS)chromosome CDS3848537 1029 - 0.446064
baeR y1381 transcriptional response regulatory protein (sensor BaeS)chromosome CDS1529551 720 - 0.530556
barA y0808 sensor-regulator, activates OmpR by phophorylationchromosome CDS904363 2802 - 0.473947
basR y0677 transcriptional regulatorchromosome CDS760525 663 - 0.493213
basS y0676 sensor protein for basRchromosome CDS759461 1068 - 0.468165
bolA y1025 murein regulatorchromosome CDS1154044 321 + 0.454829
cheA y1827 sensory transducer kinasechromosome CDS2011055 2172 + 0.501842
cheB y1841 chemotaxis-specific methylesterasechromosome CDS2030847 1053 + 0.530864
cheR y1839 protein glutamate methyltransferasechromosome CDS2029963 888 + 0.502252
cheW y1828 positive regulator of CheA protein activitychromosome CDS2013389 498 + 0.473896
cheY y1842 chemotaxis regulatorchromosome CDS2031994 396 + 0.462121
cheZ y1843 chemotactic response; CheY protein phophatasechromosome CDS2032399 645 + 0.489922
cpxA y0069 two-component sensor proteinchromosome CDS77767 1377 + 0.498911
cpxR y1482 two-component transcriptional regulatorchromosome CDS1645753 684 + 0.475146
cpxR y0067 two-component transcriptional regulatorchromosome CDS77048 723 + 0.497925
creB y3280 catabolic regulation response regulatorchromosome CDS3611702 702 - 0.497151
creC y3279 catabolite repression sensor kinase for PhoBchromosome CDS3610259 1419 - 0.508809
crp y3956 cyclic AMP receptor proteinchromosome CDS4416230 633 - 0.469194
csrA y0884 carbon storage regulatorchromosome CDS995115 186 + 0.451613
cstA y0446 carbon starvation proteinchromosome CDS497071 1818 + 0.486799
cstA y2076 carbon starvation proteinchromosome CDS2284450 2067 - 0.501209
dksA y0790 dnaK suppressor proteinchromosome CDS882921 549 - 0.489982
envZ y3917 osmolarity sensor proteinchromosome CDS4372492 1353 + 0.515152
fimZ y2386 fimbrial Z protein; signal transducerchromosome CDS2634154 633 + 0.401264
fliY y2460 ABC transporter periplasmic proteinchromosome CDS2725052 801 - 0.484395
fnr y2132 transcriptional regulation of aerobic, anaerobic respiration and osmotic balancechromosome CDS2354892 753 + 0.447543
glnE y3525 adenylylating enzyme for glutamine synthetasechromosome CDS3908423 2883 - 0.527229
glnG y3806 response regulator for gln (sensor glnL) (nitrogen regulator I, NRI)chromosome CDS4226922 1482 + 0.523617
glnH y1675 glutamine ABC transporter periplasmic-binding proteinchromosome CDS1848912 744 - 0.461022
glnL y3805 histidine protein kinase sensor for GlnG regulatorchromosome CDS4225904 1080 + 0.492593
gltI y1189 solute-binding periplasmic protein of glutamate/aspartate ABC transporterchromosome CDS1332817 918 - 0.453159
hisJ y1607 histidine-binding periplasmic protein of high-affinity histidine transport systemchromosome CDS1776638 1056 + 0.444129
hmsT y3756 hemin storage system proteinchromosome CDS4173979 1173 + 0.421142
hnr y2148 Hnr proteinchromosome CDS2374136 1017 - 0.438545
kdpD y1262 sensor for high-affinity potassium transport systemchromosome CDS1408485 2727 - 0.541988
kdpE y1261 regulator of kdp operon (transcriptional effector)chromosome CDS1407563 630 - 0.504762
lexA y0572 LexA repressorchromosome CDS647648 609 + 0.505747
narP y1441 nitrate/nitrite response regulatorchromosome CDS1598894 663 - 0.447964
narX y2351 nitrate/nitrite sensorchromosome CDS2590748 1806 + 0.4701
ompR y3871 transcriptional regulatory proteinchromosome CDS4313033 738 - 0.50813
ompR y3916 osmolarity response regulatorchromosome CDS4371776 720 + 0.522222
phoB y0978 positive response regulator for pho regulonchromosome CDS1107191 720 + 0.484722
phoH y2353 PhoB-dependent, ATP-binding pho regulon componentchromosome CDS2594305 789 - 0.486692
phoP y1794 transcriptional regulatory proteinchromosome CDS1975226 672 - 0.479167
phoQ y1793 sensor protein PhoQchromosome CDS1973766 1455 - 0.462543
phoR y0979 positive and negative sensor protein for pho regulonchromosome CDS1107935 1317 + 0.486712
proQ y1866 solute/DNA competence effectorchromosome CDS2058869 714 + 0.528011
pspA y1980 phage shock protein Achromosome CDS2182084 666 + 0.48048
pspC y1982 phage shock proteinchromosome CDS2183138 360 + 0.505556
pspF y1979 psp operon transcriptional activatorchromosome CDS2180811 1044 - 0.511494
ptsN y0157 phosphotransferase system enzyme IIAchromosome CDS164077 495 + 0.456566
ptsP y3173 PTS system enzyme Ichromosome CDS3491421 2247 - 0.534045
rcsB y2970 positive response regulator for colanic capsule biosynthesischromosome CDS3270556 654 + 0.396024
rcsC y2971 sensor for ctr capsule biosynthesischromosome CDS3271277 2874 - 0.437022
relA y0811 (p)ppGpp synthetase I (GTP pyrophosphokinase)chromosome CDS907608 2235 + 0.509172
rseA y1291 sigma-E factor, negative regulatory proteinchromosome CDS1434903 657 + 0.462709
rseB y1292 periplasmic negative regulator of sigmaEchromosome CDS1435559 957 + 0.477534
rseC y1293 sigma-E factor, negative regulatory proteinchromosome CDS1436512 456 + 0.453947
rstA y2139 response transcriptional regulatory protein (RstB sensor)chromosome CDS2363830 801 + 0.475655
rstB y2140 sensor histidine protein kinase (RstA regulator)chromosome CDS2364630 1305 + 0.469732
rtn y2909 hypothetical proteinchromosome CDS3213729 1473 + 0.428377
spoT y0103 (p)ppGpp synthetase IIchromosome CDS108967 2109 + 0.489331
tap y1838 methyl-accepting chemotaxis protein IV, peptide sensor receptorchromosome CDS2028195 1611 + 0.509001
tccC2 y0191 toxin subunitchromosome CDS201800 2859 + 0.471144
terD y0559 tellurium resistance proteinchromosome CDS625850 585 + 0.478632
terE y0560 tellurium resistance proteinchromosome CDS626618 576 + 0.465278
terZ y0555 tellurium resistance proteinchromosome CDS622435 627 + 0.484848
tsr y1837 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS2026338 1674 + 0.480287
tsr y4081 methyl-accepting chemotaxis protein IIchromosome CDS4527920 1950 + 0.492308
uhpA y2588 response regulatorchromosome CDS2850881 630 + 0.487302
uhpA y4033 response regulatorchromosome CDS4469576 663 - 0.508296
uhpB y3820 sensor proteinchromosome CDS4249083 738 + 0.48103
uspA y3859 universal stress proteinchromosome CDS4298475 447 - 0.465324
uvrY y2443 response regulatorchromosome CDS2704374 657 - 0.455099
ypeI y1733 homoserine lactone synthasechromosome CDS1917056 657 - 0.365297
ytbI y3374 N-acylhomoserine lactone synthasechromosome CDS3719465 651 + 0.411674