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2024-05-18 14:26:29

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Escherichia coli APEC O1, APEC O1

Number of genes found: 93

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli APEC O1, APEC O1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA APECO1_2448 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4553163 807 - 0.513011
NA APECO1_3423 putative hydrolasechromosome CDS3430586 927 - 0.523193
NA APECO1_310 hypothetical proteinchromosome CDS1258821 813 - 0.549815
NA APECO1_2631 putative dienelactone hydrolasechromosome CDS4328249 876 - 0.527397
NA APECO1_3445 putative saframycin Mx1 synthetase Bchromosome CDS3407083 1725 + 0.525217
NA APECO1_1055 putative ABC transporter proteinchromosome CDS2094855 1830 - 0.58306
NA APECO1_2303 hypothetical proteinchromosome CDS4722436 642 - 0.524922
NA APECO1_1452 hypothetical proteinchromosome CDS614819 414 + 0.584541
NA APECO1_2632 putative isochorismatase hydrolasechromosome CDS4327324 669 - 0.502242
NA APECO1_102 hypothetical proteinchromosome CDS1058060 735 - 0.563265
NA APECO1_2182 hypothetical proteinchromosome CDS4842938 897 - 0.512821
NA APECO1_318 glycerol metabolism operon regulatory proteinchromosome CDS1268114 1929 + 0.514256
NA APECO1_2283 putative propanediol utilization proteinchromosome CDS4740855 687 - 0.563319
aas APECO1_3670 bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-acyl carrier protein synthetasechromosome CDS3181387 2160 - 0.522222
acrA APECO1_1551 acriflavine resistance protein A precursorchromosome CDS500155 1194 - 0.536851
acrF APECO1_3173 acriflavine resistance protein Fchromosome CDS3705903 3105 + 0.510467
bioC APECO1_1312 biotin synthesis protein BioCchromosome CDS776181 795 + 0.56478
caiC APECO1_1944 crotonobetaine/carnitine-CoA ligasechromosome CDS38887 1569 - 0.507967
cchB APECO1_4101 putative carboxysome structural protein, ethanolamine utilizationchromosome CDS2693944 288 - 0.538194
ccmA APECO1_4358 heme exporter protein Achromosome CDS2406591 624 - 0.554487
cueO APECO1_1862 multicopper oxidase (laccase)chromosome CDS143245 1551 + 0.539652
cusB APECO1_1474 copper/silver efflux system, membrane fusion proteinchromosome CDS584531 1224 + 0.558007
cydD APECO1_1202 Transport ATP-binding proteinchromosome CDS900999 1767 - 0.532541
emrK APECO1_4168 EmrKY-TolC multidrug resistance efflux pump, membrane fusion proteinchromosome CDS2615981 1056 - 0.422348
entA APECO1_1453 2,3-dihydroxybenzoate-2,3-dehydrogenasechromosome CDS614040 777 + 0.570142
entB APECO1_1454 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS613213 858 + 0.548951
entC APECO1_1456 isochorismate synthasechromosome CDS610392 1188 + 0.558081
entD APECO1_1466 4'-phosphopantetheinyl transferase EntDchromosome CDS595164 771 - 0.485084
entE APECO1_1455 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complexchromosome CDS611589 1611 + 0.564867
entF APECO1_1463 enterobactin synthase multienzyme complex component, ATP-dependentchromosome CDS599724 4020 + 0.565423
eutM APECO1_4100 putative detox protein in ethanolamine utilizationchromosome CDS2694338 336 - 0.568452
eutN APECO1_2286 ethanolamine utilization protein EutNchromosome CDS4739052 270 - 0.533333
fabB APECO1_4241 3-oxoacyl-(acyl carrier protein) synthasechromosome CDS2545488 1221 - 0.561016
fabF APECO1_176 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1134290 1242 + 0.533816
fabG APECO1_174 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1133022 735 + 0.515646
fadD APECO1_863 long chain fatty acid CoA-ligasechromosome CDS1895975 1752 - 0.509132
hdhA APECO1_702 7-alpha-hydroxysteroid dehydrogenasechromosome CDS1718757 768 - 0.471354
hlyD APECO1_490 putative secretion proteinchromosome CDS1458313 1032 + 0.463178
ibeR APECO1_2094 putative regulatory protein IbeRchromosome CDS4951124 1950 + 0.39641
idnO APECO1_2128 gluconate 5-dehydrogenasechromosome CDS4909242 765 - 0.49281
irp1 APECO1_1059 yersiniabactin biosynthetic proteinchromosome CDS2105958 9162 + 0.606745
irp2 APECO1_1058 yersiniabactin biosynthetic proteinchromosome CDS2099745 6126 + 0.600718
kduD APECO1_3664 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3190030 762 - 0.51706
macA APECO1_1216 macrolide-specific efflux protein MacA precursorchromosome CDS881621 1116 + 0.533154
mdlB APECO1_1562 multidrug resistance-like ATP-binding protein MdlBchromosome CDS486250 1896 + 0.560127
mdtF APECO1_2934 putative multidrug transporter MdtF, RpoS-dependentchromosome CDS3959988 3114 + 0.530507
menE APECO1_4301 O-succinylbenzoic acid--CoA ligasechromosome CDS2482358 1356 - 0.565634
menF APECO1_4296 menaquinone-specific isochorismate synthasechromosome CDS2488058 1296 - 0.532407
nhoA APECO1_600 N-hydroxyarylamine O-acetyltransferasechromosome CDS1591655 846 + 0.503546
phnM APECO1_2355 PhnM, carbon-phosphorus lyase complex subunitchromosome CDS4662629 1137 - 0.597186
rbbA APECO1_2964 fused ribosome-associated ATPase: ATP-binding protein, predicted membrane proteinchromosome CDS3925306 2736 - 0.563596
smtA APECO1_33 SmtAchromosome CDS976997 798 + 0.516291
srlD APECO1_3821 sorbitol-6-phosphate 2-dehydrogenasechromosome CDS3001296 780 + 0.532051
sufI APECO1_3402 repressor protein for FtsIchromosome CDS3452441 1413 - 0.558386
tam APECO1_639 putative trans-aconitate 2-methyltransferasechromosome CDS1645803 759 + 0.545455
tehB APECO1_576 Tellurite resistance protein TehBchromosome CDS1563751 594 + 0.46633
ucpA APECO1_4120 oxidoreductase UcpAchromosome CDS2675044 792 - 0.551768
yafE APECO1_1780 hypothetical proteinchromosome CDS236726 771 + 0.491569
yafS APECO1_1777 putative S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS239744 741 + 0.497976
ybcY APECO1_1483 conserved hypothetical protein YbcY precursorchromosome CDS571757 666 - 0.40991
ybhF APECO1_1296 putative ABC-type transport protein YbhFchromosome CDS791790 1752 - 0.557648
ybhG APECO1_1295 conserved hypothetical membrane protein ybhGchromosome CDS793519 999 - 0.577578
ybtE APECO1_1062 yersiniabactin siderophore biosynthetic proteinchromosome CDS2117348 1578 + 0.588086
ybtP APECO1_1056 putative inner membrane ABC-transporterchromosome CDS2096644 1803 - 0.571825
ybtT APECO1_1061 yersiniabactin biosynthetic protein YbtTchromosome CDS2116541 804 + 0.587065
ycaC APECO1_1192 hypothetical proteinchromosome CDS916788 726 - 0.464187
ycgM APECO1_293 putative isomerasechromosome CDS1239936 660 + 0.525758
yciK APECO1_431 hypothetical oxidoreductase YciKchromosome CDS1387215 759 - 0.523057
ydgB APECO1_689 putative oxidoreductasechromosome CDS1702634 723 + 0.50899
ydhJ APECO1_726 hypothetical proteinchromosome CDS1742644 744 + 0.495968
ydiD APECO1_777 short chain acyl-CoA synthetase, anaerobicchromosome CDS1799791 1701 + 0.50147
ydiI APECO1_763 hypothetical proteinchromosome CDS1782209 411 - 0.506083
ydjB APECO1_837 pyrazinamidase/nicotinamidasechromosome CDS1865342 660 + 0.527273
yebH APECO1_879 ribosomal RNA large subunit methyltransferase Achromosome CDS1914165 810 - 0.511111
yecD APECO1_917 hypothetical proteinchromosome CDS1958692 567 + 0.536155
yecO APECO1_920 hypothetical proteinchromosome CDS1960562 744 + 0.5
yecP APECO1_921 hypothetical proteinchromosome CDS1961302 972 + 0.526749
yeeO APECO1_6020 hypothetical proteinchromosome CDS2130624 1491 - 0.492958
yegM APECO1_1164 hypothetical proteinchromosome CDS2240755 1395 + 0.53405
yegO APECO1_1166 hypothetical proteinchromosome CDS2245272 3078 + 0.562378
yeiN APECO1_4389 hypothetical proteinchromosome CDS2370135 939 - 0.468584
ygcW APECO1_3759 putative oxidoreductase YgcWchromosome CDS3066758 861 - 0.45993
yghA APECO1_3420 putative oxidoreductase YghAchromosome CDS3433392 888 + 0.539414
yhiI APECO1_2963 hypothetical proteinchromosome CDS3928038 1068 - 0.582397
yhiQ APECO1_2956 hypothetical proteinchromosome CDS3936968 858 - 0.590909
yibH APECO1_2860 hypothetical proteinchromosome CDS4058741 1137 - 0.531223
yigI APECO1_2656 hypothetical proteinchromosome CDS4301248 486 - 0.520576
yjcR APECO1_2369 putative membrane fusion protein of efflux pumpchromosome CDS4649743 1032 - 0.561047
yjcS APECO1_2367 hypothetical proteinchromosome CDS4651276 1998 - 0.524525
yohF APECO1_4412 putative oxidoreductasechromosome CDS2340476 762 - 0.551181
yojI APECO1_4348 putative ABC transporter ATP-binding protein YojIchromosome CDS2415977 1644 - 0.526156
yrbD APECO1_3242 putative ABC-type organic solvent transporterchromosome CDS3630500 552 - 0.492754
yrbE APECO1_3241 putative toluene transporter subunit: permease componentchromosome CDS3631056 783 - 0.550447