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2024-05-18 08:23:30

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Escherichia coli CFT073, CFT073

Number of genes found: 153

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA c3786 Putative disulfide isomerasechromosome CDS3620671 669 + 0.446936
NA c3170 Putative capsid protein of prophagechromosome CDS3040953 1434 - 0.609484
NA c1448 Putative capsid assembly protein of prophagechromosome CDS1352906 1506 + 0.602922
NA c1426 Antitermination protein Q homolog of cryptic prophagechromosome CDS1340628 822 + 0.493917
NA c1879 hypothetical proteinchromosome CDS1714907 177 + 0.468927
NA c4538 Putative pyruvate formate-lyase 3 activating enzymechromosome CDS4318098 918 + 0.465142
NA c1572 Putative capsid assembly protein of prophagechromosome CDS1429149 1506 + 0.60093
NA c1091 Putative protease La homologchromosome CDS1060314 1761 - 0.515616
NA c0348 hypothetical proteinchromosome CDS323695 243 + 0.432099
NA c1880 hypothetical proteinchromosome CDS1715196 330 + 0.433333
NA c3787 putative disulfide oxidoreductasechromosome CDS3621354 672 + 0.483631
NA c0909 Putative pyruvate formate-lyase 3 activating enzymechromosome CDS883507 927 - 0.531823
NA c3517 hypothetical proteinchromosome CDS3373532 735 + 0.469388
NA c4688 hypothetical proteinchromosome CDS4450708 330 - 0.490909
NA c1209 hypothetical proteinchromosome CDS1166202 396 + 0.477273
NA c3186 Antitermination protein Q homolog from lambdoid prophage Qinchromosome CDS3053277 783 - 0.480204
NA c3392 ClpB proteinchromosome CDS3229545 2637 + 0.603337
aat c1022 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS980857 705 - 0.53617
ahpC c0694 Alkyl hydroperoxide reductase C22 proteinchromosome CDS680944 564 + 0.496454
ahpF c0695 Alkyl hydroperoxide reductase subunit Fchromosome CDS681648 1596 + 0.522556
bcp c3008 bacterioferritin comigratory proteinchromosome CDS2871215 471 + 0.490446
btuE c2106 Vitamin B12 transport periplasmic protein btuEchromosome CDS1949526 552 - 0.48913
cbpA c1136 Curved DNA-binding proteinchromosome CDS1097799 921 - 0.533116
ccmA c2738 Heme exporter protein Achromosome CDS2584529 624 - 0.55609
ccmB c2737 Heme exporter protein Bchromosome CDS2583870 663 - 0.564103
ccmC c2736 Heme exporter protein Cchromosome CDS2583091 762 - 0.548556
ccmE c2734 Cytochrome c-type biogenesis protein ccmEchromosome CDS2582409 480 - 0.539583
ccmF c2733 Cytochrome c-type biogenesis protein ccmFchromosome CDS2580469 1944 - 0.567901
ccmH c2731 Cytochrome c-type biogenesis protein ccmH precursorchromosome CDS2578866 1053 - 0.54226
clpA c1019 ATP-dependent clp protease ATP-binding subunit clpAchromosome CDS977378 2292 + 0.529668
clpB c3114 ClpB proteinchromosome CDS2994301 2586 - 0.511988
clpP c0553 ATP-dependent Clp protease proteolytic subunitchromosome CDS530604 624 + 0.501603
clpX c0554 ATP-dependent protease ATP-binding subunitchromosome CDS531353 1275 + 0.516863
cydC c1023 Transport ATP-binding protein cydCchromosome CDS981603 1722 - 0.537747
cydD c1024 Transport ATP-binding protein cydDchromosome CDS983325 1767 - 0.535371
cyoE c0539 protoheme IX farnesyltransferasechromosome CDS520743 891 - 0.533109
cysU c2958 Sulfate transport system permease protein cysTchromosome CDS2821614 834 - 0.565947
degQ c3989 Protease degQ precursorchromosome CDS3804182 1410 + 0.516312
degS c3990 Protease degS precursorchromosome CDS3805681 1068 + 0.530899
djlA c0068 Dna-J like membrane chaperone proteinchromosome CDS60463 909 + 0.517052
dnaJ c0020 Chaperone protein dnaJchromosome CDS14951 1131 + 0.548187
dnaK c0019 molecular chaperone DnaKchromosome CDS12946 1917 + 0.510694
dsbA c4804 Thiol:disulfide interchange protein dsbA precursorchromosome CDS4568909 627 + 0.480064
dsbB c1633 disulfide bond formation protein Bchromosome CDS1469815 537 - 0.52514
dsbC c3473 Thiol:disulfide interchange protein dsbC precursorchromosome CDS3335085 711 - 0.482419
dsbD c5218 thiol:disulfide interchange protein precursorchromosome CDS4972379 1698 - 0.53828
dsbE c2732 Thiol:disulfide interchange protein dsbEchromosome CDS2579915 558 - 0.550179
dsbG c0692 Thiol:disulfide interchange protein dsbG precursorchromosome CDS679826 807 - 0.460967
fdhE c4841 formate dehydrogenase accessory protein FdhEchromosome CDS4603811 930 - 0.547312
fklB c5306 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerasechromosome CDS5045893 780 + 0.532051
fkpA c4121 FKBP-type peptidyl-prolyl cis-trans isomerase fkpA precursorchromosome CDS3907995 813 - 0.484625
flgA c1341 flagellar basal body P-ring biosynthesis proteinchromosome CDS1273707 660 - 0.536364
flgJ c1350 flagellar biosynthesis proteinchromosome CDS1280842 972 + 0.539095
flgN c1339 Flagella synthesis protein flgNchromosome CDS1272917 417 - 0.482014
fliJ c2359 flagellar proteinchromosome CDS2169714 444 + 0.522523
fliS c2340 flagellar protein FliSchromosome CDS2154981 411 + 0.479319
glnD c0202 PII uridylyl-transferasechromosome CDS196276 2673 - 0.537972
glnE c3801 Glutamate-ammonia-ligase adenylyltransferasechromosome CDS3635654 2952 - 0.553862
groEL c5227 chaperonin GroELchromosome CDS4980059 1647 + 0.530662
groES c5226 co-chaperonin GroESchromosome CDS4979722 294 + 0.486395
grpE c3135 GrpE proteinchromosome CDS3012701 594 - 0.506734
grxA c0982 Glutaredoxin 1chromosome CDS944871 273 - 0.465201
grxB c1331 Glutaredoxin 2chromosome CDS1266907 648 - 0.489198
grxC c4433 Glutaredoxin 3chromosome CDS4218377 252 - 0.5
gst c2027 Glutathione S-transferasechromosome CDS1874906 606 + 0.504951
hflC c5259 HflC proteinchromosome CDS5011460 1005 + 0.523383
hflK c5258 HflK proteinchromosome CDS5010198 1260 + 0.561905
hlyC c3569 Hemolysin Cchromosome CDS3418210 675 + 0.348148
hofD c4106 Leader peptidasechromosome CDS3896922 678 + 0.504425
hscA c3051 chaperone protein HscAchromosome CDS2925266 1905 - 0.575853
hscB c3052 co-chaperone HscBchromosome CDS2927133 516 - 0.523256
hslJ c1826 Heat shock protein hslJchromosome CDS1659061 435 - 0.478161
hslO c4172 Hsp33-like chaperoninchromosome CDS3955821 885 + 0.527684
hslU c4884 ATP-dependent protease ATP-binding subunitchromosome CDS4640110 1332 - 0.521021
hslV c4885 ATP-dependent protease peptidase subunitchromosome CDS4641451 531 - 0.52919
htpG c0593 heat shock protein 90chromosome CDS569770 1875 + 0.526933
htpX c2238 heat shock protein HtpXchromosome CDS2063367 882 - 0.531746
htrA c0197 Protease do precursorchromosome CDS191223 1425 + 0.540351
hyaE c1117 Hydrogenase-1 operon protein hyaEchromosome CDS1080143 399 + 0.551378
hybG c3727 Hydrogenase-2 operon protein hybGchromosome CDS3561590 249 - 0.522088
hypB c3287 Hydrogenase isoenzyme nickel incorporation protein hypBchromosome CDS3131693 873 + 0.556701
hypC c3288 Hydrogenase isoenzyme formation protein hypCchromosome CDS3132556 273 + 0.542125
hypD c3289 Hydrogenase isoenzyme formation protein hypDchromosome CDS3132828 1122 + 0.549911
hypE c3290 Hydrogenase isoenzyme formation protein hypEchromosome CDS3133946 1011 + 0.570722
hypF c3268 Hydrogenase maturation protein hypFchromosome CDS3117740 2325 - 0.579355
ibpA c4607 16 kDa heat shock protein Achromosome CDS4368745 420 - 0.469048
ibpB c4606 16 kDa heat shock protein Bchromosome CDS4368205 435 - 0.485057
lon c0555 ATP-dependent protease Lachromosome CDS532770 2400 + 0.5225
mchD c1230 MchD proteinchromosome CDS1178897 453 + 0.423841
msrA c5317 methionine sulfoxide reductase Achromosome CDS5057435 705 - 0.540426
nrdG c5336 Anaerobic ribonucleoside-triphosphate reductase activating proteinchromosome CDS5076974 465 - 0.516129
nrdH c3226 Glutaredoxin-like protein nrdHchromosome CDS3081260 246 + 0.536585
nrfE c5070 Cytochrome c-type biogenesis protein nrfEchromosome CDS4844772 1683 + 0.572192
nrfF c5071 Formate-dependent nitrite reductase complex nrfF subunit precursorchromosome CDS4846447 384 + 0.513021
nrfG c5072 Formate-dependent nitrite reductase complex nrfG subunitchromosome CDS4846827 597 + 0.522613
osmC c1916 Osmotically inducible protein Cchromosome CDS1749589 432 + 0.49537
pcm c3310 protein-L-isoaspartate O-methyltransferasechromosome CDS3152102 627 - 0.53429
pflA c1038 Pyruvate formate-lyase 1 activating enzymechromosome CDS1001299 768 - 0.501302
pflC c4911 Pyruvate formate-lyase 2 activating enzymechromosome CDS4673271 879 + 0.547213
ppiA c4138 Peptidyl-prolyl cis-trans isomerase A precursorchromosome CDS3923113 573 - 0.514834
ppiB c0641 Peptidyl-prolyl cis-trans isomerase Bchromosome CDS623001 495 - 0.476768
ppiC c4697 Peptidyl-prolyl cis-trans isomerase Cchromosome CDS4460473 282 - 0.507092
ptr c3415 Protease III precursorchromosome CDS3263316 2889 - 0.507788
rpsV c1913 30S ribosomal protein S22chromosome CDS1748790 138 - 0.449275
slpA c0032 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerasechromosome CDS28071 450 + 0.544444
slyD c4123 FKBP-type peptidyl-prolyl cis-trans isomerase slyDchromosome CDS3909295 591 - 0.551607
smpB c3142 SsrA-binding proteinchromosome CDS3017482 483 + 0.515528
sms c5474 DNA repair protein radAchromosome CDS5215245 1431 + 0.583508
sohB c1737 Possible protease sohBchromosome CDS1572932 1050 + 0.50381
sppA c2170 Protease IVchromosome CDS2006066 1857 + 0.518578
sspA c3982 stringent starvation protein Achromosome CDS3800262 639 - 0.536776
surA c0066 Survival protein surA precursorchromosome CDS56608 1287 - 0.537685
tig c0551 trigger factorchromosome CDS529060 1299 + 0.513472
tpx c1796 thiol peroxidasechromosome CDS1630926 507 - 0.516765
trxA c4701 thioredoxinchromosome CDS4465820 435 + 0.485057
trxB c1025 Thioredoxin reductasechromosome CDS985214 1086 - 0.515654
trxC c3107 Thioredoxin 2chromosome CDS2981427 420 + 0.497619
ybaU c0557 Peptidyl-prolyl cis-trans isomerase Dchromosome CDS535842 1872 + 0.521368
ybbJ c0609 Hypothetical protein ybbJchromosome CDS590361 459 - 0.583878
ybbK c0610 Hypothetical protein ybbKchromosome CDS590816 918 - 0.527233
ybbN c0613 Hypothetical protein ybbNchromosome CDS593386 891 - 0.546577
ybeW c2164 Chaperone protein hscCchromosome CDS1999554 1701 - 0.451499
ycaL c1047 Putative metalloprotease ycaLchromosome CDS1011216 774 + 0.489664
yciQ c1733 Hypothetical protein yciQchromosome CDS1568347 1893 + 0.472266
ydcP c1859 Putative protease ydcP precursorchromosome CDS1697478 2004 + 0.506487
ydhD c2048 Protein ydhDchromosome CDS1889895 348 - 0.525862
ydhH c2032 Hypothetical protein ydhHchromosome CDS1879022 1110 - 0.554955
yeaA c2183 methionine sulfoxide reductase Bchromosome CDS2019246 444 - 0.47973
yeaZ c2211 Hypothetical protease yeaZchromosome CDS2042244 696 - 0.558908
yedF c2345 Hypothetical protein yedFchromosome CDS2159157 234 + 0.482906
yegD c2596 Hypothetical chaperone protein yegDchromosome CDS2434939 1416 + 0.556497
yegQ c2611 Putative protease yegQchromosome CDS2457424 1362 + 0.543319
yegU c2626 Hypothetical protein yegUchromosome CDS2470767 1005 + 0.545274
yfcF c2844 Hypothetical GST-like protein yfcFchromosome CDS2702344 645 - 0.51938
yfcG c2845 Hypothetical GST-like protein yccGchromosome CDS2703124 648 + 0.512346
yfgJ c3032 Hypothetical protein yfgJchromosome CDS2904232 216 - 0.453704
ygcF c3335 Hypothetical protein ygcFchromosome CDS3177637 672 - 0.508929
yggG c3521 Putative metalloprotease yggGchromosome CDS3376764 978 + 0.517382
yggX c3550 hypothetical proteinchromosome CDS3399952 276 + 0.471014
yghU c3726 Hypothetical GST-like protein yghUchromosome CDS3560534 915 + 0.536612
ygjD c3815 Probable O-sialoglycoprotein endopeptidasechromosome CDS3650124 1014 - 0.564103
yhbU c3911 Putative protease yhbU precursorchromosome CDS3735090 1023 + 0.56305
yhbV c3912 Hypothetical protein yhbVchromosome CDS3736103 897 + 0.558528
yhfA c4131 Hypothetical protein yhfAchromosome CDS3916802 405 - 0.51358
yhgI c4191 Protein yhgIchromosome CDS3972233 576 + 0.527778
yhhP c4263 hypothetical proteinchromosome CDS4047406 246 - 0.50813
yibF c4413 Hypothetical GST-like protein yibFchromosome CDS4197047 609 - 0.527094
yifB c4687 Hypothetical protein yifBchromosome CDS4449486 1086 - 0.514733
yjjW c5462 Hypothetical protein yjjWchromosome CDS5203398 864 - 0.55787
yliJ c0923 Hypothetical GST-like protein yliJchromosome CDS900748 633 - 0.519747
ynhC c2076 SufD proteinchromosome CDS1916660 1272 - 0.533805
ynhD c2077 Probable ATP-dependent transporter sufCchromosome CDS1917906 747 - 0.499331
ynhE c2078 SufB proteinchromosome CDS1918662 1527 - 0.516045