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2024-05-18 14:26:27

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Yersinia pestis KIM, KIM

Number of genes found: 139

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA y2164 methionine sulfoxide reductase Bchromosome CDS2391287 471 - 0.443737
NA y0706 collagenasechromosome CDS792961 996 - 0.5251
NA y3957 hypothetical proteinchromosome CDS4417198 408 + 0.490196
NA y0319 peroxiredoxin family proteinchromosome CDS346619 732 - 0.463115
NA y1937 hypothetical proteinchromosome CDS2135306 1326 + 0.497738
NA y0535 hypothetical proteinchromosome CDS601882 270 + 0.548148
NA y3791 hypothetical proteinchromosome CDS4211044 723 - 0.304288
NA y0227 hypothetical proteinchromosome CDS239254 1176 + 0.460884
NA y1096 proteasechromosome CDS1235462 915 - 0.469945
NA y0354 glutamine cyclotransferasechromosome CDS395253 792 - 0.340909
NA y1379 hypothetical proteinchromosome CDS1527407 1395 - 0.496057
NA y0334 two-component regulatorchromosome CDS368467 1545 - 0.532686
NA y3909 hypothetical proteinchromosome CDS4364349 279 + 0.437276
NA y3311 hypothetical proteinchromosome CDS3646857 780 + 0.489744
NA y0112 transferasechromosome CDS122056 936 + 0.49359
NA y3613 hypothetical proteinchromosome CDS4005512 180 + 0.527778
NA y3189 hypothetical proteinchromosome CDS3511342 636 + 0.47956
NA y3447 hypothetical proteinchromosome CDS3834214 294 - 0.503401
NA y1394 heat shock proteinchromosome CDS1549071 1353 - 0.543976
NA y1097 thioredoxin-like proteinchromosome CDS1236571 870 - 0.508046
NA y0229 hypothetical proteinchromosome CDS242133 855 + 0.495906
NA y3903 hypothetical proteinchromosome CDS4361988 576 - 0.46875
NA y2739 ATP-dependent proteasechromosome CDS3021964 1773 + 0.51269
NA y3534 O-sialoglycoprotein endopeptidasechromosome CDS3917772 1029 - 0.516035
NA y1963 hypothetical proteinchromosome CDS2163408 1155 + 0.51342
NA y3195 type IV prepilin peptidasechromosome CDS3515572 915 - 0.357377
NA y2871 transferasechromosome CDS3168739 723 + 0.481328
NA y3548 hypothetical proteinchromosome CDS3929900 717 + 0.492329
NA y2238 hypothetical proteinchromosome CDS2466377 753 - 0.544489
NA y3340 hypothetical proteinchromosome CDS3679946 273 + 0.410256
NA y3482 hypothetical proteinchromosome CDS3865823 423 + 0.385343
NA y0816 hypothetical proteinchromosome CDS915174 672 + 0.491071
NA y1575 cytochrome c-type biogenesis proteinchromosome CDS1740956 1227 + 0.495518
NA y3784 peptidasechromosome CDS4204696 1047 + 0.526266
NA y0409 hypothetical proteinchromosome CDS457677 396 + 0.467172
NA y0705 hypothetical proteinchromosome CDS792071 900 - 0.506667
NA Y1114 putative serine proteasepMT-1 CDS98281 831 + 0.515042
NA y1280 pyrrolidone-carboxylate peptidasechromosome CDS1425707 648 + 0.498457
NA y0944 adhesin system proteinchromosome CDS1063849 1854 + 0.452535
NA y1095 hypothetical proteinchromosome CDS1235010 450 - 0.502222
NA Y1056 hypothetical proteinpMT-1 CDS48264 354 - 0.533898
NA y2363 thioredoxin-family proteinchromosome CDS2606790 531 - 0.468927
NA y1935 hypothetical proteinchromosome CDS2132888 1512 + 0.494048
NA y3669 ATP-dependent proteasechromosome CDS4076150 2604 - 0.534562
NA y1953 hypothetical proteinchromosome CDS2155983 366 + 0.459016
NA y1158 ABC transporter, ATP-binding proteinchromosome CDS1307011 1791 + 0.467337
NA y1574 cytochrome c-type biogenesis proteinchromosome CDS1740444 513 + 0.465887
NA y1538 Clp ATPasechromosome CDS1702814 2751 + 0.475463
NA y0988 peroxidasechromosome CDS1119184 603 - 0.472637
NA y1031 protease maturation proteinchromosome CDS1161987 1887 + 0.45469
NA y1936 ATP-binding component of a transport systemchromosome CDS2134558 774 + 0.459948
aat y2806 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS3109812 735 + 0.491156
bcp y1417 bacterioferritin comigratory proteinchromosome CDS1573250 474 - 0.443038
btuE y1915 vitamin B12-binding periplasmic protein of vitamin B12 ABC transporterchromosome CDS2108578 555 + 0.445045
ccmA y1567 ATP binding protein of heme exporter Achromosome CDS1735042 657 + 0.494673
ccmB y1568 heme exporter protein Bchromosome CDS1735641 687 + 0.519651
ccmC y1569 heme exporter protein Cchromosome CDS1736390 738 + 0.501355
ccmE y1571 heme lyasechromosome CDS1737423 495 + 0.511111
ccmF y1572 cytochrome c-type biogenesis proteinchromosome CDS1737914 1971 + 0.524099
clpA y2809 ATP-binding component of serine proteasechromosome CDS3112053 2283 - 0.494963
clpB y0275 heat shock proteinchromosome CDS293817 2604 - 0.53149
clpB y0914 heat shock proteinchromosome CDS1021277 2595 + 0.478613
clpB y3362 proteasechromosome CDS3705087 2649 - 0.585126
clpB y2699 heat shock proteinchromosome CDS2981840 2640 - 0.592424
clpP y1027 ATP-dependent Clp protease proteolytic subunitchromosome CDS1156547 624 + 0.461538
clpX y1028 ATP-dependent protease ATP-binding subunitchromosome CDS1157376 1272 + 0.481132
cydC y2805 ATP-binding component of cytochrome-related transportchromosome CDS3107893 1725 + 0.515942
cydD y2803 ATP-binding component of cytochrome-related transportchromosome CDS3106106 1785 + 0.505882
cyoE y1018 protoheme IX farnesyltransferasechromosome CDS1145303 909 - 0.465347
cysU y1467 inner membrane permease T of sulfate/thiosulfate ABC transporterchromosome CDS1625825 834 + 0.53717
degQ y0137 serine endoproteasechromosome CDS148564 1392 + 0.484914
degS y0139 proteasechromosome CDS150756 1089 + 0.481175
djlA y3679 Dna-J like membrane chaperone proteinchromosome CDS4089116 834 - 0.5
dnaJ y3705 chaperone with DnaK; heat shock proteinchromosome CDS4118103 1140 - 0.499123
dnaK y3706 molecular chaperone DnaKchromosome CDS4119354 1911 - 0.480377
dsbA y3812 protein disulfide isomerase Ichromosome CDS4236383 624 - 0.421474
dsbB y2179 disulfide bond formation protein Bchromosome CDS2409820 579 + 0.455959
dsbC y3275 protein disulfide isomerase IIchromosome CDS3606320 717 - 0.456067
dsbD y0603 thiol:disulfide interchange protein precursorchromosome CDS680946 1788 - 0.522371
dsbE y1573 disulfide oxidoreductasechromosome CDS1739881 567 + 0.497355
fdhE y4075 formate dehydrogenase accessory protein FdhEchromosome CDS4519865 930 - 0.495699
fklB y0651 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS733296 621 + 0.520129
fkpA y3977 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS4433330 840 + 0.458333
flgA y2511 flagellar basal body P-ring biosynthesis proteinchromosome CDS2772500 765 + 0.517647
flgJ y2502 flagellar biosynthesis proteinchromosome CDS2765093 945 - 0.540741
flgN y2514 flagellar biosynthesis proteinchromosome CDS2773733 444 + 0.488739
fliJ y2480 flagellar proteinchromosome CDS2744765 447 + 0.478747
fliS y2467 flagellar protein FliSchromosome CDS2731874 399 + 0.466165
fliT y2468 repressor of class 3a and 3b operons (RflA activity)chromosome CDS2732232 414 + 0.425121
glnD y3139 PII uridylyl-transferasechromosome CDS3450658 2739 + 0.49215
glnE y3525 adenylylating enzyme for glutamine synthetasechromosome CDS3908423 2883 - 0.527229
groEL y0609 chaperonin GroELchromosome CDS687731 1647 + 0.504554
groES y0608 co-chaperonin GroESchromosome CDS687391 294 + 0.489796
grpE y3073 heat shock proteinchromosome CDS3383536 579 - 0.47323
grxA y2855 glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductasechromosome CDS3153362 264 + 0.439394
grxC y0075 glutaredoxin 3chromosome CDS83726 249 - 0.514056
gst y1968 glutathionine S-transferasechromosome CDS2168209 609 - 0.456486
hflB y0682 integral membrane peptidase, cell division proteinchromosome CDS764620 1944 + 0.46965
hflC y2843 ftsH proteinase activity modulatorchromosome CDS3142789 927 - 0.399137
hflC y0634 protease specific for phage lambda cII repressorchromosome CDS716498 1005 + 0.502488
hflK y0633 protease specific for phage lambda cII repressorchromosome CDS715235 1260 + 0.503175
hscA y1339 chaperone protein HscAchromosome CDS1483166 1935 + 0.547804
hscB y1338 co-chaperone HscBchromosome CDS1482399 525 + 0.506667
hslJ y2003 heat shock protein HslJchromosome CDS2205442 453 - 0.437086
hslO y3919 Hsp33-like chaperoninchromosome CDS4375795 882 - 0.492063
hslU y0294 ATP-dependent protease ATP-binding subunitchromosome CDS312872 1332 - 0.487988
hslV y0295 ATP-dependent protease peptidase subunitchromosome CDS314274 525 - 0.487619
htpG y1064 heat shock protein 90chromosome CDS1198004 1875 + 0.463467
htpX y1868 heat shock protein HtpXchromosome CDS2062129 882 + 0.470522
htrA y0807 periplasmic serine protease Dochromosome CDS902759 1446 + 0.498617
ibpA y4102 heat shock proteinchromosome CDS4553462 414 - 0.425121
ibpB y4101 heat shock proteinchromosome CDS4552717 507 - 0.481262
lfgA y3457 flagellar basal body P-ring biosynthesis proteinchromosome CDS3840808 918 + 0.486928
lon y1029 DNA-binding ATP-dependent protease La; heat shock K-proteinchromosome CDS1158788 2409 + 0.479867
msrA y0658 methionine sulfoxide reductase Achromosome CDS740810 639 - 0.532081
nrdG y0732 anaerobic ribonucleotide reductase activating proteinchromosome CDS815071 435 - 0.51954
nrdH y1225 glutaredoxin-like proteinchromosome CDS1375806 237 - 0.447257
pcm y0832 protein-L-isoaspartate O-methyltransferasechromosome CDS931543 627 + 0.496013
pflA y2792 pyruvate formate lyase activating enzyme 1chromosome CDS3091400 798 + 0.463659
ppiA y3951 peptidyl-prolyl cis-trans isomerase Achromosome CDS4409170 600 + 0.453333
ppiB y1106 peptidyl-prolyl cis-trans isomerase Bchromosome CDS1245056 495 - 0.466667
ppiC y0355 peptidyl-prolyl cis-trans isomerase Cchromosome CDS396283 297 - 0.447811
ptr y3165 protease IIIchromosome CDS3480752 2889 - 0.467636
slpA y3698 FKBX-type 16KD peptidyl-prolyl cis-trans isomerasechromosome CDS4110017 534 - 0.47191
slyD y3975 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS4432028 588 + 0.52551
smpB y3079 SsrA-binding proteinchromosome CDS3388332 495 + 0.458586
sms y3737 ATP-dependent proteasechromosome CDS4155353 1383 - 0.544469
sohB y2057 proteasechromosome CDS2265449 1047 + 0.483286
sppA y2160 protease IV, a signal peptide peptidasechromosome CDS2387165 1851 + 0.480281
sspA y0132 stringent starvation protein Achromosome CDS144392 642 - 0.487539
surA y3681 survival proteinchromosome CDS4092544 1305 + 0.485824
tig y1026 trigger factorchromosome CDS1154781 1305 + 0.47433
tpx y1990 thiol peroxidasechromosome CDS2190007 576 - 0.473958
trxA y0360 thioredoxin 1chromosome CDS401861 327 + 0.461774
trxB y2802 thioredoxin reductasechromosome CDS3104703 963 + 0.515057
trxC y0919 thioredoxin-like proteinchromosome CDS1035512 438 - 0.502283
ureE y1240 urease accessory proteinchromosome CDS1389215 705 + 0.49078
ureF y1241 urease accessory proteinchromosome CDS1389941 687 + 0.490539
ureG y1242 urease accessory proteinchromosome CDS1390754 663 + 0.484163